• Journal of Plant Biotechnology
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• v.39 no.4
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• pp.295-299
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• 2012

We performed in vitro assay and field trials to assess levels of changes in intrinsic properties and resistance against soft rot of the potato cv. Dejima upon the introduction of a soybean calmodulin 4 gene (SCaM4). Field trials with four lines overexpressing SCaM4 gene were conducted over two seasons, and harvested tubers were evaluated in bioassay for resistance to Pectobacterium carotovorum ssp. carotovorum. The SCaM4 transgenic potato lines inoculated with $10^8$ CFU/ml of P. carotovorum ssp. carotovorum showed enhanced resistance compared to control. Among the SCaM4 transgenic lines, the transgenic line SCaM4-4 exhibited the highest tolerance to soft rot in vitro assays, so did in field trials. In the field trial, the soft rot resistance of SCaM4-4 line was more than 5 times higher compared to that of control cultivar, Dejima. The major agronomic characteristics of the SCaM4 transgenic lines were not different from those of the nontransgenic 'Dejima'. The result demonstrated that the transformation of a calmodulin 4 gene was a successful strategy in development of potato cultivar enhanced to soft rot.

• Mycobiology
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• v.39 no.2
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• pp.140-142
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• 2011

Soft rot in apple caused by Rhizopus oryzae was found for the first time in Korea. A detailed description of the specimen is given along with its internal transcribed spacer rDNA sequence. The fungus was identified as Rhizopus oryzae based on the mycological characteristics, molecular data, and pathogenicity testing.

• The Korean Journal of Mycology
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• v.30 no.2
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• pp.166-169
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• 2002

A fruits soft rot caused by Rhizopus stolonifer found on citrus fruit in Jinjn City Agricultural Products Wholesale Market. The disease infection usually started from wounding. At first, the lesions started water soaked and rapidly softened and diseased lesion gradually expanded to other fruits in the same container. The mycelia grew vigorously on the surface of fruits and formed sporangia, sporangiophores and stolons. Sporangiophores were $900{\sim}4300{\mu}m$ in size. Sporangia were globose or subglobose and $98{\times}346{\mu}m$ in size. The color of sporangia was white at first and then turned black with many spores. Columella were globose or ellipsoid and $60{\sim}216{\times}72{\sim}143{\mu}m$ in size. Sporangiospores were globose or ellipsoid, brownish-black streaked and $8{\sim}18.3{\mu}m$ in diameter. Zygospores were globose, black and $98{\sim}176{\mu}m$ in size. The optimum temperature for mycelial growth of the fungus on PDA was $25^{\circ}C$. The causal fungus was identified as Rhizopus stolonifer. This is the first report of rhizopus soft rot on citrus fruit caused by R. stolonifer in Korea.

• Research in Plant Disease
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• v.14 no.2
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• pp.127-130
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• 2008

Rhizopus soft rot caused by Rhizopus stolonifer on June, 2008 occurred on Rubus crataegifolius Bunge in the box at Jinju City Wholesale Market of Agricultural Products at Gyeongnam province in Korea. The infected fruits were rapidly water-soaked, softened, black and eventually rotted. The symptoms occurred after infecting wounds at harvest time. The colony were white to light brown, formed much sporangiospores. The optimum temperature of the fungus on potato dextrose agar was $30^{\circ}C$. Sporangiophores were $12{\sim}25{\mu}m$ in width. Sporangia were globose or hemispheric, white at first and gradually to black, and $82{\sim}195{\mu}m$ in size. Columella were hemispheric, and $70{\sim}92{\mu}m$ in size. Sporangiospores were irregular round or oval, brownishblack and $9{\sim}21{\times}7{\sim}8{\mu}m$ in size. On the basis of symptom, mycological characteristics and pathogenicity of the fungus, the causal fungus was identified as Rhizopus stolonifer. This is the first report of Rhizopus soft rot by R. stolonifer on R. crataegifolius in Korea.

• Research in Plant Disease
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• v.17 no.2
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• pp.111-120
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• 2011

A bacterial artificial chromosome library of Pectobacterium carotovorum 35 was constructed to characterize the genome and to sequence its hrp region. The hrp cluster of P. carotovorum 35 consisted of 26 open reading frames in five operons. A promoter-based green fluorescent protein technology was used to identify the genes regulated by the alternative sigma factor, HrpL, in P. carotovorum 35. The majority of the selected clones contained the hrpJ operon promoter sequence, which harbors a hrp box, but no putative hrp boxes were detected within the promoter sequences of two other hrpL-regulated genes encoding for pectate lyase and large repetitive protein. Although the promoters of five other hrp operons also contained hrp boxes, their expression was not HrpL-dependent in the promoter-based selection in E. coli. However, transcriptional analysis showed that expression from all operons harboring hrp boxes, except for the hrpN operon, was reduced significantly in the hrpL mutant. The severity of soft-rot symptoms when the hrpL mutant was applied to the surface of tobacco leaves, mimicking natural infection, was greatly attenuated. These results indicate that the hrpL gene of P. carotovorum 35 may be involved in the development of soft-rot symptoms.

• The Korean Journal of Mycology
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• v.35 no.1
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• pp.54-57
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• 2007

Rhizopus soft rot caused by Rhizopus stolonifer occurred on banana (Musa sapientum) in the box at Jinju City Wholesale Market of Agricultural Products at Gyeongnam province in Korea. The infected fruits were rapidly water-soaked, softened, blackened and eventually rotted. They were infected from wounds at harvest time. The colony of the isolate from the infected fruit was white to light brown and formed many sporangiospores. The optimum growth temperature of the fungus on potato dextrose agar was $30^{\circ}C$. Sporangiophores were $12{\sim}26\;{\mu}m$ in width. Sporangia were globose or hemispheric, white at first and changed gradually to black, and $83{\sim}195\;{\mu}m$ in size. Columella were hemispheric, and $72{\sim}125\;{\mu}m$ in size. Sporangiospores were irregular round or oval, brownish-black and $9{\sim}20{\times}7{\sim}8\;{\mu}m$ in size. On the basis of symptom, mycological characteristics and pathogenicity to banana, the causal fungus was identified as Rhizopus stolonifer. This is the first report of Rhizopus soft rot by R. stolonifer on banana in Korea.

• The Korean Journal of Mycology
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• v.36 no.2
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• pp.199-202
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• 2008

Rhizopus soft rot caused by Rhizopus stolonifer occurred on melon (Cucumis melo L.) in the box at Jinju City Wholesale Market of Agricultural Products at Gyeongnam province in Korea. The infected fruits were rapidly water-soaked, softened, black and eventually rotted. The symptoms were infected from wounds at harvest time. The colony were white to light brown, formed much sporangiospores. The optimum temperature of the fungus was $30^{\circ}C$. Sporangia were globose or hemispheric, white at first and gradually to black, and $80{\sim}195\;{\mu}m$ in size. Sporangiophores were $12{\sim}24\;{\mu}m$ in width. Columella were hemispheric, and $70{\sim}90\;{\mu}m$ in size. Sporangiospores were irregular round or oval, brownish-black and $9{\sim}20\;{\times}\;6{\sim}8\;{\mu}m$ in size. On the basis of symptom, mycological characteristics and pathogenicity to melon, the causal fungus was identified as Rhizopus stolonifer (Ehrenb.) Vuill.. This is the first report of Rhizopus soft rot by R. stolonifer on melon in Korea.

• Research in Plant Disease
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• v.11 no.2
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• pp.204-207
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• 2005

A Rhizopus soft rot caused by Rhizopus stolonifer occurred on Momordica charantia at Daesan-myon, Chang-won city, Gyeongnam province from 2003 to 2005. The disease usually started from wound on fruit with water-soaking lesions. The lesion rapidly expanded and softened. The fungal mycelia grew vigorously and sporangia, sporangiophores, and stolons were formed on surface of the fruit. Spoyangiophores were $15\~30{\mu}m$ in width. Sporangia were globose or hemispheric and $90\~180{\mu}m$ in size. The color of sporangia was white and cottony at first and turned to brownish black with many spores at maturity. Columella were hemispheric and $80\~150{\mu}m$ in size. Sporangiospores were irregular round or oval, brownish-black streaked and $7\~18{\times}6\~12{\mu}m$ in size. The optimum temperature for mycelial growth of the fungus on PDA was $25^{\circ}C$. On the basis of mycological characteristics and pathogenicity to host plants, the causal fungus was identified as Rhizopus stolonifer (Ehrenberg ex. Fr,) Lind. This is the first report of Rhizopus soft rot on M. charantia caused by R. stolonifer in Korea.

• Mycobiology
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• v.29 no.3
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• pp.176-178
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• 2001

A soft rot of fruits caused by Rhizopus stolonifer occurred on cherry tomato in Jinju City Agricultural Products Wholesale Market, Korea. The disease infection usually started from wounding after cracking of fruits. At first, the lesions started with water soaked and were rapidly softened and diseased lesion gradually expanded. The mycelia grew vigorously on the surface of fruits and formed stolons. Colonies on potato dextrose agar at $25^{\circ}C$ were white cottony at first, becoming heavily speckled by the presence of sporangia and the browinish black, and spreading rapidly by means of stolons fired at various points to the substrate by rhizoids. Sporangia were $82.7{\times}196.7{\mu}m$ in size and globose or sub-globose with somewhat flattened base. The color of sporangia was white at first and then turned black with many spores, and never overhanging. Sporangiophores were $2.6{\sim}5.8{\times}12.3{\sim}24.2{\mu}m$ in width, smooth-walled, non-septate, tight brown, simple, long, arising in groups of $3{\sim}5$ from stolons opposite rhizoids. Sporangiospores were $8.2{\sim}18.8{\mu}m$ long, irregular, round, oval, elongate, angular, and browinish-black streaked. Columella was $64.1{\times}136.3{\mu}m$. brownish gray, and umberella-shaped when dehisced. The causal organism was identified to be R. stolonifer. This is the first report of Rhizopus soft rot on cherry tomato caused by R. stolonifer in Korea.

• The Plant Pathology Journal
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• v.38 no.6
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• pp.656-664
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• 2022

Pectobacterium odoriferum is the primary causative agent in Kimchi cabbage soft-rot diseases. The pathogenic bacteria Pectobacterium genera are responsible for significant yield losses in crops. However, P. odoriferum shares a vast range of hosts with P. carotovorum, P. versatile, and P. brasiliense, and has similar biochemical, phenotypic, and genetic characteristics to these species. Therefore, it is essential to develop a P. odoriferumspecific diagnostic method for soft-rot disease because of the complicated diagnostic process and management as described above. Therefore, in this study, to select P. odoriferum-specific genes, species-specific genes were selected using the data of the P. odoriferum JK2.1 whole genome and similar bacterial species registered with NCBI. Thereafter, the specificity of the selected gene was tested through blast analysis. We identified novel species-specific genes to detect and quantify targeted P. odoriferum and designed specific primer sets targeting HAD family hydrolases. It was confirmed that the selected primer set formed a specific amplicon of 360 bp only in the DNA of P. odoriferum using 29 Pectobacterium species and related species. Furthermore, the population density of P. odoriferum can be estimated without genomic DNA extraction through SYBR Green-based real-time quantitative PCR using a primer set in plants. As a result, the newly developed diagnostic method enables rapid and accurate diagnosis and continuous monitoring of soft-rot disease in Kimchi cabbage without additional procedures from the plant tissue.