• Title/Summary/Keyword: zooplankton species

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Application of DNA Analysis for Identification of Prey Items on Zooplankton: Selective Treatment Method (기수역 요각류 위내용물 유전자 분석: 소화기관 내외부 유전자의 선택적 처리방법)

  • Chae, Yeon-Ji;Oh, Hye-Ji;Kim, Yong-Jae;Chang, Kwang-Hyeon;Jo, Hyunbin
    • Korean Journal of Ecology and Environment
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    • v.54 no.3
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    • pp.247-256
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    • 2021
  • Understanding the selective feeding behavior of zooplankton on phytoplankton is essential for evaluating the nutrient cycle and energy flow in the food web. Although many studies have been conducted regarding the feeding behaviors of zooplankton through gut content analyses, there are limitations in the visual identification of digested contents using a microscope. DNA techniques have been applied to overcome these limitations since they can detect and amplify small amounts of prey DNA remaining in the gut contents. We designed a method to extract prey DNA from the gut contents of the whole body of the copepod specimen and tested the resolution of DNA identification for the prey phytoplankton. The common brackish species, Sinocalanus tenellus, were collected from Saemangeum Reservoir in different sites and seasons, and gut content DNA was extracted using 2.5% bleach treatment for 2 min for removal of potential contamination sources existing in preserved specimens without dissolution of the body. The sequences of the extracted gut contents were confirmed using BLASTn suite based on the NCBI database. The phytoplankton species detected in the gut showed temporal and spatial differences. Although DNA analysis of small copepod gut contents has been suggested as an effective method to examine the dynamics of primary prey sources at the genus or species level, uncertainties such as misidentification and limitations in the detailed information of the composition still exist.

Zooplankton Abundance in Korean Waters (한국근해 동물성 부유생물의 주요군의 양적 분포)

  • Park, Joo-suck
    • 한국해양학회지
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    • v.8 no.1
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    • pp.33-45
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    • 1973
  • Plankton samples used for the present study were collected by the NORPAC net during the CSK cruises in the Korean waters in March and August, 1967. Regional and seasonal variations in the zooplankton biomass (wet weight, mg/㎥) were noticed in the Korean waters. In March the highest biomass, 130mg/㎥ on the average, occurred in the southern part of Japan Sea, but the lowest biomass of less than 50mg/㎥ occurred in the Yellow Sea and the western sea of Cheju Island Contrally, in August, the average biomass of 120mg/㎥ was measured in the Yellow Sea, the western sea of Cheju Island and the coastal waters of southern Korea, while the biomass of Japan Sea was the lowest of the regions surveyed. In comparison with the zooplankton biomass, total number of zooplankton per cubic meter of water strained also showed regional and seasonal fluctuations. In general, variations in the number of zooplankton specimens follows the same trend as in the biomass. The largest number, up to 800mg/㎥ on the average, occurred in the southern part of Japan Sea in March and the lowest number, less than 200mg/㎥ occurred in the Yellow Sea and the western sea of Cheju Island. In August, as shown by the biomass fluctuations, the largest number of zooplankton 850mg/㎥ on the average occurred in the Yellow Sea, the western sea of Cheju Island and the coastal region of southern Korea. But the lowest number of less than 500mg/㎥ was found in the Japan Sea. Among the various groups of zooplankton examined, the following were dominant components of the zooplankton population: Copepoda, Chaetognatha, Siphonophora, Euphausiacea, Cladocera, Appendicularia, and Amphipoda. The zooplankton conposition was significantly differed between the Japan Sea and Yellow Sea. Copepods which usually occupied over 66% in the Japan Sea and thd Korean Strait samples occupied only 42% of the catches in August, while cladocerans and chaetognaths were relatively abundant, i. e., 15 and 18% of the total organisms. The most dominant species of copepods and chaetognaths were Paracalanus parvus, Oithona similis, Acartia clausi, Calanus helgolandicus, Sagitta enflata, S. bedoti, S. elegans and S. crassa.

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The Distribution of Zooplankters with a Note on their Feeding in the Wet Lands of the Lower Han River (한강 하구 습지의 동물플랑크톤 분포 및 섭식)

  • Kim, Saywa
    • Korean Journal of Environmental Biology
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    • v.35 no.4
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    • pp.566-572
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    • 2017
  • For four times, zooplankton collection were conducted seasonally in October 2015-July 2016 at five sites located in the wet lands of the lower Han River, ie., Si-am, Sung-dong, Gong-reung stream, San-nam and Jang-hang. A total of 46 species of zooplankton were collected, which comprise 25 species of rotifers, seven cladocerans, ten copepods, and one species of nematod, ostracod and decapod, respectively. No brackish and marine species were distributed except for two species of brackish water copepods. Prosperity in the species number of 15 species was observed in October at Sung-dong and Jang-hang. The maximum abundance was recorded in March at Si-am with $8,000indiv.\;L^{-1}$ with the explosion of Brachionus calyciflorus. Other sites also showed high abundances in March with the abundance higher than $5,000indiv.\;L^{-1}$. Except in March, the abundance levels were recorded as less than some hundred $indiv.\;L^{-1}$ throughout the study. Species diversity varied between 0.4-1.8. The gut contents of the copepodite showed that various diatoms might be their major food items, and lots of unidentified materials were also observed. The environmental conditions of water temperature, pH and dissolved oxygen content showed to vary $10.1-28.2^{\circ}C$, 7.1-8.6 and $4.5-11.0mg\;L^{-1}$, respectively.

Intra- and Interspecific Variation in the Ribosomal Internal Transcribed Spacers and 5.8S rDNA among three species of Pseudodiaptomus (Calanoida, Pseudodiaptomidae) from Korean Estuarine Waters

  • Soh, Ho-Young;Suh, Hae-Lip;Yoon, Yang-Ho;Park, Sang-Duk;Kwon, Soon-Yoo
    • Proceedings of the Korean Society of Fisheries Technology Conference
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    • 2001.05a
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    • pp.437-438
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    • 2001
  • Species of the genus Pseudodiaptomus are reported as the major constituents in the fresh or brackish waters in the northeastern Asia (Suh et al., 1991; Oka et al., 1991). Of these species, P. inopinus (Burckhardt) and P. poplesia (Shen) are particularly numerous in spring and autumn (Suh et al., 1991; Shen and Song, 1979). Recently. we found a presence of two types of Pseudodiaptomus inopinus during the course of investigation on zooplankton from Korean estuaries. (omitted)

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New Record of Oncaea prendeli (Copepod, Cyclopoida, Oncaeidae) in Korean Waters

  • Cho, Kyuhee;Kim, Jong Guk;Lee, Jimin
    • Ocean and Polar Research
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    • v.42 no.4
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    • pp.283-292
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    • 2020
  • Oncaea prendeli Shmeleva, 1966 is redescribed here based on a specimen collected using a fine-mesh net in the epipelagic layer in the south sea of Jeju Island, Korea. The Korean specimen is generally similar to Mediterranean specimens in terms of morphological characteristics, but it shows a few minor differences in a slightly larger length-to-width ratio for the distal endopod segment of the antenna, a relatively shorter caudal seta IV, and additional ornamentation on the maxillule and maxilla. This species is distinguishable from the most similar congeneric species, O. tregoubovi Shmeleva, 1968, and three species of the genus Spinoncaea Böttger-Schnack, 2003 by the distal and lateral armature of the antenna, ornamentation on the female maxilliped, spine number on the endopod of leg 2, and proportional length of setae on the caudal ramus. Moreover, spine lengths on the exopods of legs 2-4 are proposed as new morphological characters for the identification of congeners. This is the first record of O. prendeli in Korean waters.

A Study on Odor and Taste from Nam River (남강의 수중보에서 발생하는 이취미 물질에 관한 연구)

  • 이춘식;박현건
    • Journal of Environmental Science International
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    • v.11 no.4
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    • pp.399-403
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    • 2002
  • This study was designed to analyse the odor from Nam river. The characteristic odor in the water occurred from geosmin and phenol, p-cresol and indol were detected from sediment/water samples. The others were detected as alcohols and fat acid compounds. Algae causing odor and taste were identified as Oscillatoria sp. and Synedra acus. 15 species of phytoplankton, a zooplankton, an eelworm and chironomus were identified in water/sediment sample.

Molecular Taxonomy of a Phantom Midge Species (Chaoborus flavicans) in Korea

  • An, Hae-In;Jung, Gil-A;Kim, Chang-Bae
    • Animal Systematics, Evolution and Diversity
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    • v.28 no.1
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    • pp.36-41
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    • 2012
  • The larvae of Chaoborus are widely distributed in lakes, ponds, and reservoirs. These omnivorous Chaoborus larvae are crucial predators and play a role in structuring zooplankton communities, especially for small-sized prey. Larvae of Chaoborus are commonly known to produce predator-induced polyphenism in Daphnia sp. Nevertheless, their taxonomy and molecular phylogeny are very poorly understood. As a fundamental study for understanding the role of Chaoborus in predator-prey interactions in a freshwater ecosystem, the molecular identification and phylogenetic relationship of Chaoborus were analyzed in this study. A molecular comparison based on partial mitochondrial cytochrome oxidase I (COI) between species in Chaoborus was carried out for the identification of Chaoborus larvae collected from 2 localities in Korea. According to the results, the Chaoborus species examined here was identified as C. flavicans, which is a lake-dwelling species. Furthermore, partial mitochondrial genome including COI, COII, ATP6, ATP8, COIII, and ND3 were also newly sequenced from the species and concatenated 5 gene sequences excluding ATP8 with another 9 dipteran species were compared to examine phylogenetic relationships of C. flavicans. The results suggested that Chaoborus was more related to the Ceratopogonidae than to the Culicidae. Further analysis based on complete mitochondrial DNA sequences and nuclear gene sequences will provide a more robust validation of the phylogenetic relationships of Chaoborus within dipteran lineages.

Species Identification and Noise Cancellation Using Volume Backscattering Strength Difference of Multi-Frequency (다중 주파술의 체적산란강도 차이를 이용한 에코그램 내에서의 종 분리와 잡음 제거)

  • KANG Donhyug;SHIN Hyoung-Chul;KIM Suam;LEE Yoonho;HWANG Doojin
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.36 no.5
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    • pp.541-548
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    • 2003
  • Species identification in hydroacoustic survey is one of the key requirements to estimate biomass of organism and to understand the structure of zooplankton community. Feasibility of species identification using two frequencies (38 and 120 kHz) was investigated on the basis of mean volume backscattering strength difference (MVBS). Virtual echogram technique was applied to two frequencies data sets that obtained from surveys in the Antarctic Ocean and Yellow Sea. Virtual echogram method using MVBS revealed the possibility of species identification, which species identification relying on visual scrutiny of single frequency acoustic data resulted in significant errors in biomass estimation. Through noise cancellation using MVBS, much of the acoustic noise caused by acoustic instruments could be removed in new virtual echogram, and the biomass estimation and data quality was improved.

Assessing the Plankton Dynamics in Lakes and Reservoirs Ecosystem in the Southwestern Parts of Korea (국내 남서부지역 호수 및 저수지 생태계의 플랑크톤 동태 변화)

  • Kim, Hyun-Woo;La, Geung-Hwan;Jeong, Kwang-Seuk;Park, Jong-Hwan;Huh, Yu-Jung;Kim, Sang-Don;Na, Jeong-Eun;Jung, Myoung-Hwa;Lee, Hak-Young
    • Korean Journal of Environmental Biology
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    • v.28 no.2
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    • pp.86-94
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    • 2010
  • This study compares and contrasts the dynamics of plankton in 31 temperate lakes and reservoirs, and considers particularly the biomass ratio of zooplankton to phytoplankton and ecological model application. A total of 89 species of zooplankton were identified (70 rotifers, 14 cladocerans and 5 copepods) and a total of 554 species of phytoplankton were identified (176 Bacillariophyceae, 237 Chlorophyceae, 68 Cyanophyceae, and 73 other algal taxa). The total plankton abundance and species diversity were showed distinctive spatial and seasonal variation. Annual average phytoplankton density was $7,350{\pm}15,592$ cells $mL^{-1}$ (n=124), and the lowest was $855{\pm}448$ cells $mL^{-1}$ (n=4), while the highest was $72,048{\pm}13,4631$ cells $mL^{-1}$ (n=4). For zooplankton, small rotifer groups dominated the study sites, and approximately 3~10 species appeared in the study sites. Statistical analysis and an ecological model application revealed that the size of reservoirs affected the structure size of plankton community, i.e. relatively large number of species were found in smaller reservoirs. From this result, we can conclude that management strategy for the reservoir environment has to be focused more on small-size reservoirs, in terms of plankton community ecology.

Effect of Filter-feeding Bivalve (Corbiculidae) on Phyto- and Zooplankton Community (여과 섭식성 패류가 동 ${\cdot}$ 식물플랑크톤 군집에 미치는 영향)

  • Kim, Ho-Sub;Kong, Dong-Soo;Hwang, Soon-Jin
    • Korean Journal of Ecology and Environment
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    • v.37 no.3 s.108
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    • pp.319-331
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    • 2004
  • This study was conducted to evaluate the ecological impact of freshwater bivalve (Corbiculidae) on plankton communities in experimental enclosure systems (2 m ${\times}$ 2 m ${\times}$ 2 m). During the acclamation period of one month, cyanobacteria, including Microcystis viridis and Microcystis aeruginosa, dominated in both control and treatment enclosures with no noticeable density difference. After the addition of 100 mussels, dominant species of phytoplankton shifted from Microcystis to Scenedesmus in concert with slight decrease in the cell density and the increase of N/P ratio. However, cell density in the control quickly increased, accompanied with changes of dominant species to Oscillatoria spp. With the introduction of additional 500 musseles in the treatment enclosure, dominant phytoplankton species in both enclosures were replaced with Selenastrum spp. and Cryptomonas sp. In the initial stage, the total zooplankton abundance in the control was higher than that of treatment, but it was reversed after the addition 100 mussels. After mussel density increased up to 600 indivisuals, zooplankton density in the treatment decreased with dominance of small taxa, such as rotifers and nauplius. However, abundance and carbon biomass of large zooplankton, such as Bosmina longirostris and Diacyclops thomasi were maintained in a high level compared with those of control. During the study period, Chl. a concentration in mussel treatment and control increased with DIP and $NH_3-N$, respectively. Due to the increase of $NH_3-N$, especially after the introduction of additional 500 mussels, nitrogen limitation did not occur in the treatment enclosure in contrast with strong nutrient limitation occurred in the control. These results indicate that filter-feeding Corbicula could exert important impact on nutrient recycling and plankton community structure in a freshwater ecosystem, through direct feeding and competition for the same food resource as zooplankton on one hand, and through alteration of nutrient availability on the other.