• Title/Summary/Keyword: specific plants

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Structural Characteristics of Two Wheat Histone H2A Genes Encoding Distinct Types of Variants and Functional Differences in Their Promoter Activity

  • Huh, Gyung-Hye;Iwabuchi, Masaki
    • Proceedings of the Botanical Society of Korea Conference
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    • 1996.07a
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    • pp.26-38
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    • 1996
  • To investigate the regulation of plant histone H2A gene expression, we isolated two H2A genes (TH254 and TH274) from wheat, which encode different types of variants. Both genes had an intron in the coding region. In the promoters, some characteristics sequences, such as Oct and Nona motifs, which are conserved among plant histone genes were also found, and they were located in a short region (about 120 bp) upstream from the putative TATA box. Analyses of promoter activity with H2A-GUS fusion genes in the transient system using tobacco protoplasts revealed novel types of positive cis-acting sequences in the TH254 promoter: a direct repeat of a 13-bp sequence (AGTTACATTATTG) and a stretch composed of an AT-rich sequence (ATATAGAAAATTAAAA) and a G-box (CACGTG). A quantitative S1 assay of the mRNA amounts from the TH254/GUS and TH274/GUG chimeric genes in stably transformed and cell cycle-synchronized tobacco cell lines showed that the promoters of both genes contained at least one cis-acting element responsible for S phase-specific expression. Histochemical analysis of transgenic tobacco plants carrying the chimeric genes showed that the promoters of the two H2A genes were both active in developing seedlings and flower organs but regulated in different manner.

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Expression of Arabidopsis Phytochelatin Synthase 2 Is Too Low to Complement an AtPCS1-defective Cad1-3 Mutant

  • Lee, Sangman;Kang, Beom Sik
    • Molecules and Cells
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    • v.19 no.1
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    • pp.81-87
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    • 2005
  • Phytochelatins play an important role in heavy metal detoxification in plants as well as in other organisms. The Arabidopsis thaliana mutant cad1-3 does not produce detectable levels of phytochelatins in response to cadmium stress. The hypersensitivity of cad1-3 to cadmium stress is attributed to a mutation in the phytochelatin synthase 1 (AtPCS1) gene. However, A. thaliana also contains a functional phytochelatin synthase 2 (AtPCS2). In this study, we investigated why the cad1-3 mutant is hypersensitive to cadmium stress despite the presence of AtPCS2. Northern and Western blot analyses showed that expression of AtPCS2 is weak compared to AtPCS1 in both roots and shoots of transgenic Arabidopsis. The lower level of AtPCS2 expression was confirmed by RT-PCR analysis of wild type Arabidopsis. Moreover, no tissue-specific expression of AtPCS2 was observed. Even when AtPCS2 was under the control of the AtPCS1 promoter or of the cauliflower mosaic virus 35S promoter (CaMV 35S) it was not capable of fully complementing the cad1-3 mutant for cadmium resistance.

Development of a Novel Sampling Technique for Natureal VOC Emissions

  • Kim, Jo-Chun
    • Journal of Korean Society for Atmospheric Environment
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    • v.17 no.E2
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    • pp.61-70
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    • 2001
  • In recent years there have been growing interests in the potential environmental effects of global climate change. Of specific interests is the role that climate change may play in altering natural volatile organic compound.(NVOC) emissions from trees and the subsequent impact of this perturbation on air quality and ozone formation. A novel vegetation enclosure chamber method was designed and constructed of Tedlar in order to estimate more accurate and precise NVOC emission rates of either small whole plants or the branches of large trees. The enclosure chamber was initially tested in the laboratory and also successfully evaluated in the field. Overall precision for this enclosure was estimated as RSD<10%(n=9). The overall errors associated with the enclosure method in a laboratory system might be relatively small (say<$\pm$15%); however, they might be rather large(say$\pm$40%) in a field-based system. Two consecutive samples were collected on each sampling day from the two pine species during the test period. Slash pine studies showed that the absolute percentage difference between the first and second samples varied from 0.33 to 29%. The percent differences between consecutive emission for loblolly pines varied from 0.74 to 24.2%.

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Arabidopsis AHL Gene Encodes a 3'(2'),5'-Bisphosphate Nucleotidase Sensitive to Toxic Heavy Metal Ions

  • Cheong, Jong-Joo;Kwon, Hawk-Bin
    • Journal of Applied Biological Chemistry
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    • v.42 no.4
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    • pp.169-174
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    • 1999
  • Arabidopsis AHL gene contains 4 exons encoding a putative protein highly homologous to the yeast salt-sensitive enzyme HAL2, a 3'(2'),5'-bisphosphate nucleotidase involving in reductive sulfate assimilation. AHL cDNA complemented yeast met22 (hal2) mutant. AHL fusion protein expressed in E. coli exhibited $Mg^{2+}$-dependent, 3'-phosphoadenosine 5'-phosphate (PAP)-specific phosphatase activity. $Li^+,\;Na^+,\;K^+$ and $Ca^{2+}$ ions inhibit the enzyme activity by competing with $Mg^{2+}$ for the active site of the enzyme. The enzyme activity was also sensitive to ${\mu}M$ concentrations of toxic heavy metal ions such as $Cd^{2+},\;Cu^{2+}$ and $Zn^{2+}$, but was not recovered by addition of more $Mg^{2+}$ ions, suggesting that these ions inactivate the enzyme with a mechanism other than competition with $Mg^{2+}$ ions. Inhibition of the AHL enzyme activity may result in accumulation of PAP, which is highly toxic to the cell. Thus, the AHL enzyme could be one of the intial targets of heavy metal toxicity in plants.

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The Analysis of Slope Stability on Clay-Fly Ash Mixtures Embankment (점토-Fly Ash 혼합물로 된 제체의 사면안정 해석(지반공학))

  • 권무남;정성욱;김현기
    • Proceedings of the Korean Society of Agricultural Engineers Conference
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    • 2000.10a
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    • pp.477-483
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    • 2000
  • Fly ash is the unburned residue resulting from the combustion of coal in utility and industrial boilers such as thermal power plants. Annually about 5 million tons of fly ash is being produced in korea. Less than 25 percent of total volume of fly ash is currently being used effectively for some ways. In the future, the volume of fly ash discharge from thermal power stations will be increasing more and more, and the development of the utilization of high volume fly ash is required. Fly ash has a lower compacted density and specific gravity than coarse grained natural aggregates but equivalent strength properties indicating that the fly ash could be used as a structural fill materials. So, clay-fly ash mixtures can be used as a fill material in the construction of embankments. Laboratory tests have been carried out to determine the physical, chemical, and geotechnical characteristics of the clay and fly ash. The fly ash is mixed with the clay in different proportions and the geotechnical characteristics of the mixtures have been studied also. In this study describes the results of the experimental study. The implications of the use of clay and clay-fly ash mixtures on the stability of embankments are discussed.

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The Effect of Contextual Factors on Resistance to Change in Lean Transformation

  • TRAN, Duc Trong;PHAM, Huong Thu;BUI, Van Thu
    • The Journal of Asian Finance, Economics and Business
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    • v.7 no.11
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    • pp.479-489
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    • 2020
  • The purpose of this paper is to uncover whether and how contextual factors (information exchange, participation, trust in management, and training), relate to resistance to change. It also explores the mediating effect of perceived impact of change on the relations between contextual factors and resistance to change. This study is conducted in several manufacturing plants in food processing industry in Vietnam, which is implementing a top-down large-scale change - Lean transformation, adopting Total Productive Maintenance (TPM) program, to be specific. The findings suggest that all four contextual factors are negatively associated with resistance to change, in which training had the strongest impact. Also, the perceived change impact partially mediates the relationships between the four contextual factors and resistance to change. The practical implications of this paper are that employees who receive adequate, timely and useful information relating to change are less likely to show opposing behaviors towards change. Fostering trust in management among employees, and employee involvement in decision-making, also have a significant influence when addressing employee resistance to change. Employees who are well-trained, well-equipped with tools and knowledge about the change, are less likely to resist as they view the benefits of changes more significant than the risks.

A Study on Transcriptome Analysis Using de novo RNA-sequencing to Compare Ginseng Roots Cultivated in Different Environments

  • Yang, Byung Wook
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2018.04a
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    • pp.5-5
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    • 2018
  • Ginseng (Panax ginseng C.A. Meyer), one of the most widely used medicinal plants in traditional oriental medicine, is used for the treatment of various diseases. It has been classified according to its cultivation environment, such as field cultivated ginseng (FCG) and mountain cultivated ginseng (MCG). However, little is known about differences in gene expression in ginseng roots between field cultivated and mountain cultivated ginseng. In order to investigate the whole transcriptome landscape of ginseng, we employed High-Throughput sequencing technologies using the Illumina HiSeqTM2500 system, and generated a large amount of sequenced transcriptome from ginseng roots. Approximately 77 million and 87 million high-quality reads were produced in the FCG and MCG roots transcriptome analyses, respectively, and we obtained 256,032 assembled unigenes with an average length of 1,171 bp by de novo assembly methods. Functional annotations of the unigenes were performed using sequence similarity comparisons against the following databases: the non-redundant nucleotide database, the InterPro domains database, the Gene Ontology Consortium database, and the Kyoto Encyclopedia of Genes and Genomes pathway database. A total of 4,207 unigenes were assigned to specific metabolic pathways, and all of the known enzymes involved in starch and sucrose metabolism pathways were also identified in the KEGG library. This study indicated that alpha-glucan phosphorylase 1, putative pectinesterase/pectinesterase inhibitor 17, beta-amylase, and alpha-glucan phosphorylase isozyme H might be important factors involved in starch and sucrose metabolism between FCG and MCG in different environments.

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An Active Site Arginine Residue in Tobacco Acetolactate Synthase

  • Kim, Sung-Ho;Park, En-Joung;Yoon, Sung-Sook;Choi, Jung-Do
    • Bulletin of the Korean Chemical Society
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    • v.24 no.12
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    • pp.1799-1804
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    • 2003
  • Acetolatate synthase(ALS) catalyzes the first common step in the biosynthesis of valine, leucine, isoleucine in plants and microorganisms. ALS is the target of several classes of herbicides, including the sulfonylureas, the imidazolinones, and the triazolopyrimidines. To elucidate the roles of arginine residues in tobacco ALS, chemical modification and site-directed mutagenesis were performed. Recombinant tobacco ALS was expressed in E. coli and purified to homogeneity. The ALS was inactivated by arginine specific reagents, phenylglyoxal and 2,3-butanedione. The rate of inactivation was a function of the concentration of modifier. The inactivation by butanedione was enhanced by borate, and the inactivation was reversible on removal of excess butanedione and borate. The substrate pyruvate and competitive inhibitors fluoropyruvate and phenylpyruvate protected the enzyme against inactivation by both modifiers. The mutation of well-conserved Arg198 of the ALS by Gln abolished the enzymatic activity as well as the binding affinity for cofactor FAD. However, the mutation of R198K did not affect significantly the binding of FAD to the enzyme. Taken together, the results imply that Arg198 is essential for the catalytic activity of the ALS and involved in the binding of FAD, and that the positive charge of the Arg is crucial for the interaction with negatively charged FAD.

Study on the Retardation Effect of Overload on the Corrosion Fatigue Crack Propagation Al-Alloy used for the Shipbuilding (과하중에 의한 선박용 알루미늄 합금재의 부식피로 파괴지연에 관한 연구)

  • Lim, Uh-Joh;Lee, Jong-Rark;Lee, Jin-Yeol
    • Journal of Ocean Engineering and Technology
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    • v.2 no.2
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    • pp.122-129
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    • 1988
  • Recently with the rapid development in marine and shipbuliding industries such as marine structures, ship and chemical plants, there occurs much interest in the study of corrosion fatigue characteristics which was closed up an important role in mechanical design. In this study, the 5086 Al-alloy was tested by use of rotary bending fatigue tester. The retardation effect of overload on the corrosion fatigue crack propagation in sea environment was quantitatively studied. 1) Retardation effect of corrosion fatigue crack propagation is most eminent when overload ratio is 1.52, overload magnitude corresponds to about 77% and 55% of yield strength and tensile strength respectively. 2) After overload ratio 1.52 was used, retardation of corrosion fatigue crack growth rate is largely retarded and quasi-threshold stress intensity factor range($\Delta\textrm{K}_{th}$) appears. 3) According to m of experimental constant, retardation effect of corrosion fatigue crack propagation corresponds to about 25% of constant stress amplitude when overload ratio is 1.52. 4) When overload ratio 1.52 was used, retardation parameter (RP) decreases to about 0.43 and corrosion sensitivity (S)decreses to about 2.1.

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A Complex Noise Suppression Algorithm for On-line Partial Discharge Diagnosis Systems (운전중 부분방전 진단시스템을 위한 복합 잡음제거 기법)

  • Yi, Sang-Hwa;Youn, Young-Woo;Choo, Young-Bae;Kang, Dong-Sik
    • The Transactions of The Korean Institute of Electrical Engineers
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    • v.58 no.2
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    • pp.342-348
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    • 2009
  • This paper introduces a novel denoising algorithm for the partial-discharge(PD) signals from power apparatuses. The developed algorithm includes three kinds of specific denoising sub-algorithms. The first sub-algorithm uses the fuzzy logic which classifies the noise types in the magnitude versus phase PD pattern. This sub-algorithm is especially effective in the rejection of the noise with high and constant magnitude. The second one is the method simply removing the pulses in the phase sections below the threshold count in the count versus phase pattern. This method is effective in removing the occasional high level noise pulses. The last denoising sub-algorithm uses the grouping characteristics of PD pulses in the 3D plot of the magnitude versus phase versus cycle. This special technique can remove the periodical noise pulses with varying magnitudes, which are very difficult to be removed by other denoising methods. Each of the sub-algorithm has different characteristic and shows different quality of the noise rejection. On that account, a parameter which numerically expresses the noise possessing degree of signal, is defined and evaluated. Using the parameter and above three sub-algorithms, an adaptive complex noise rejection algorithm for the on-line PD diagnosis system is developed. Proposed algorithm shows good performances in the various real PD signals measured from the power apparatuses in the Korean plants.