• Title/Summary/Keyword: s-sequences

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ON UNIFORMLY S-ABSOLUTELY PURE MODULES

  • Xiaolei Zhang
    • Journal of the Korean Mathematical Society
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    • v.60 no.3
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    • pp.521-536
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    • 2023
  • Let R be a commutative ring with identity and S a multiplicative subset of R. In this paper, we introduce and study the notions of u-S-pure u-S-exact sequences and uniformly S-absolutely pure modules which extend the classical notions of pure exact sequences and absolutely pure modules. And then we characterize uniformly S-von Neumann regular rings and uniformly S-Noetherian rings using uniformly S-absolutely pure modules.

First Discovery of Endogenous Retroviruses in Collared Peccaries (Tayassu Tajacu) (페카리 종 Tayassu tajacu에서 내인성 리트로 바이러스의 발견)

  • Lee, Jun-Heon
    • Korean Journal of Agricultural Science
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    • v.30 no.1
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    • pp.59-65
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    • 2003
  • To investigate the relationship of endogenous retroviruses in peccaries and pigs, a set of degenerate primers was used in this study to amplify peccary retroviral sequences. The sequences of two putative retroviral clones showed close homology to mouse and pig retroviral sequences. The peccary endogenous retroviral sequences are significant in that they are the first such sequences reported in peccary species and repudiate old claims in the literature that peccaries do not have C-type retroviral sequences.

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Phylogenetic Relationship of Microcystis (Cyanophyceae) Based on Partial 16S rRNA Gene Sequences in Korea (16S rRNA 유전자의 일부 염기서열에 기초한 한국산 Microcystis의 계통 유연관계)

  • Kim, Jong-In;Lim, Jong-Hun;Lee, Jae-Wan;Lee, Hae-Bok
    • ALGAE
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    • v.17 no.3
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    • pp.153-159
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    • 2002
  • Partial 16S rRNA gene sequences of seven cyanophycean strains from the National Instiute of Environmental Research of Korea - Microcystis aeruginosa, M. aeruginosa f. aeruginosa, M. ichthyoblade, M. viridis, Anabaena flos-aquae, and Oscillatoria sancta - were analyzed and the phylogenetic relationship of Microcystis among Cyanophyceae were evaluated. Based on sequence analysis results, Microcystis is monophyletic, the clade of which supported 100% bootstrap tress, and distinguished clearly from the other taxa. Therefore, the partial 16S rRNA gene sequences can be a useful and efficient tool for distinguishing Microcystis from other cyanophycean without axenic culture or cloning.

DNA Barcoding of Boccardiella hamata (Annelida: Polychaeta: Spionidae) in South Korea

  • Lee, Geon Hyeok;Yoon, Seong Myeong;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • v.36 no.3
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    • pp.268-273
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    • 2020
  • A spionid polychaete, Boccardiella hamata (Webster, 1879) has been found from mud in crevices between the shells of oysters and adherent substrates in South Korea. The sequences of mitochondrial DNA (mtDNA) cytochrome c oxidase subunit 1 (CO1), 16S ribosomal DNA (16S), and the nuclear 18S ribosomal DNA (18S) from Korean individuals of Boccardiella hamata were determined in the present study. The molecular analysis based on the 18S rRNA gene sequences showed clear separation among the spionid polychaete species, and the sequences of Korean and Japanese individuals are completely identical. The morphological diagnosis and photographs of B. hamata are also provided.

Characterization and DNA Structure Analysis of Replication Origin of Misgurnus mizolepis (미꾸라지의 복제원점에 대한 특성 및 구조 분석)

  • Lim Hak-Seob;Kim Moo-Sang;Seok Young-Seon;Park Sang-Dai;Lee Hyung-Ho
    • Journal of Aquaculture
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    • v.9 no.1
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    • pp.93-100
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    • 1996
  • Previously, as an effort to make an autonomously replicating expression vector in fish, an ARS (autonomously replicating sequence) was cloned from MAR (matrix attachment region) of Misgurnus mizolepis. The DNA fragment composed of 443 base pairs contains ARS core consensus sequences, topoisomerase II consensus sequences, and A or T box sequences which are homologous to the known consensus sequences originated from other organisms. The clond ARS, as other DNA replication origins, contains inverted repeat sequences and several potential hairpin loop structures. These consensus sequences and hairpin structures may serve as recognition signals for regulatory proteins of DNA replication initiation.

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An Anomalous Sequence Detection Method Based on An Extended LSTM Autoencoder (확장된 LSTM 오토인코더 기반 이상 시퀀스 탐지 기법)

  • Lee, Jooyeon;Lee, Ki Yong
    • The Journal of Society for e-Business Studies
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    • v.26 no.1
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    • pp.127-140
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    • 2021
  • Recently, sequence data containing time information, such as sensor measurement data and purchase history, has been generated in various applications. So far, many methods for finding sequences that are significantly different from other sequences among given sequences have been proposed. However, most of them have a limitation that they consider only the order of elements in the sequences. Therefore, in this paper, we propose a new anomalous sequence detection method that considers both the order of elements and the time interval between elements. The proposed method uses an extended LSTM autoencoder model, which has an additional layer that converts a sequence into a form that can help effectively learn both the order of elements and the time interval between elements. The proposed method learns the features of the given sequences with the extended LSTM autoencoder model, and then detects sequences that the model does not reconstruct well as anomalous sequences. Using experiments on synthetic data that contains both normal and anomalous sequences, we show that the proposed method achieves an accuracy close to 100% compared to the method that uses only the traditional LSTM autoencoder.

Methanogenic Archaeal Census of Ruminal Microbiomes (반추위 마이크로바이옴 내 메탄생성고세균 조사)

  • Lee, Seul;Baek, Youlchang;Lee, Jinwook;Kim, Minseok
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.21 no.7
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    • pp.312-320
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    • 2020
  • The objective of the study was to undertake a phylogenetic diversity census of ruminal archaea based on a meta-analysis of 16S rRNA gene sequences that were publicly available in the Ribosomal Database Project. A total of 8,416 sequences were retrieved from the Ribosomal Database Project (release 11, update 5) and included in the construction of a taxonomy tree. Species-level operational taxonomic units (OTUs) were analyzed at a 97% sequence similarity by using the QIIME program. Of the 8,416 sequences, 8,412 were classified into one of three phyla; however, the remaining four sequences could not be classified into a known phylum. The Euryarchaeota phylum was predominant and accounted for 99.8% of the archaeal sequences examined. Among the Euryarchaeota, 65.4% were assigned to Methanobrevibacter, followed by Methanosphaera (10.4%), Methanomassillicoccus (10.4%), Methanomicrobium (7.9%), Methanobacterium (1.9%), Methanimicrococcus (0.5%), Methanosarcina (0.1%), and Methanoculleus (0.1%). The 7,544 sequences that had been trimmed to the V2 and V3 regions clustered into 493 OTUs. Only 17 of those 493 OTUs were dominant groups and accounted for more than 1% of the 7,544 sequences. These results can help guide future research into the dominant ruminal methanogens that significantly contribute to methane emissions from ruminants, research that may lead to the development of anti-methanogenic compounds that inhibit these methanogens regardless of diet or animal species.

STATISTICAL CONVERGENCE OF DOUBLE SEQUENCES OF COMPLEX UNCERTAIN VARIABLES

  • DATTA, DEBASISH;TRIPATHY, BINOD CHANDRA
    • Journal of applied mathematics & informatics
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    • v.40 no.1_2
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    • pp.191-204
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    • 2022
  • This paper introduces the statistical convergence concepts of double sequences of complex uncertain variables: statistical convergence almost surely(a.s.), statistical convergence in measure, statistical convergence in mean, statistical convergence in distribution and statistical convergence uniformly almost surely(u.a.s.).

ESL Teachers' Corrective Sequences and Second Language Socialization

  • Seong, Gui-Boke
    • English Language & Literature Teaching
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    • v.13 no.2
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    • pp.177-200
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    • 2007
  • The language socialization approach states that novices are socialized into cultural norms through participating in routine, repeated interactional acts and sequences (e.g., Ochs & Schieffelin, 1984; Ochs, 1988; Schieffelin & Ochs, 1986a; 1986b; Watson-Gegeo & Gegeo, 1986). One of the cultural norms or dominant epistemological orientations in American culture is the tendency to avoid the overt display of power asymmetry in novice-expert relationship (Ochs & Schieffelin, 1984). This study examines how this cultural preference is reflected and encoded in ESL teachers' use of routine discourse patterns in corrective sequences. Eight hours of ESL classes taught by three Caucasian teachers born and educated in the U.S. were analyzed for the study. The analysis showed that the cultural tendency in question is keyed and indexed in the teacher's routine corrective discourse patterns in the form of various questioning, elicitation, and mitigation practices. Findings support that teachers' routine classroom discourse practices represent their cultural ideologies and transfer these cultural predispositions to second language learners and that they possibly socialize the learners into the target language-oriented beliefs.

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