• 제목/요약/키워드: population biology

검색결과 1,554건 처리시간 0.025초

한반도 가시나무(참나무과)의 분포 및 자생지 현황 (The distribution and population status of Quercus myrsinifolia (Fagaceae) on the Korean peninsula)

  • 이정현;이동혁;최혁재;;;;최병희
    • 식물분류학회지
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    • 제44권3호
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    • pp.165-170
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    • 2014
  • 상록성 참나무류는 한반도 상록활엽수림을 구성하는 주요 수종으로 알려져 있다. 그러나 가시나무(Quercus myrsinifolia Blume)의 한반도 분포지와 자생현황은 명확히 밝혀져 있지 않다. 본 연구에서는 문헌조사와 표본에 근거한 현지조사를 토대로 가시나무의 자생지를 밝혀 한반도 내 분포를 명확히 하고자 하였다. 또한 보존대책의 첫 단계로 자생 개체수 전수 조사를 실시 하였다. 조사결과, 한반도 내에서 가시나무는 전남 진도에 단 3개의 아집단으로 구성된 169개의 성체만이 제한적으로 자라는 것으로 확인되었다. 본 연구를 통해 오동정과 식물표본의 채집지 오기재가 종의 분포에 대한 혼란을 야기하는 주된 원인임을 알 수 있었다. 금번 조사결과는 한국산 가시나무의 효과적 보전을 위한 중요한 지표자료로 활용할 수 있을 것이다. 또한 식물표본의 정확한 데이터 기재의 필요성을 확인할 수 있다. 한편 본 논문에서는 한반도에서 이 종의 분포가 진도에만 제한되게 된 원인에 대해 논의 하였다.

Trichloroethylene으로 오염된 지하수 제거공정의 미생물 다양성 및 분리균주 Pseudomonas sp. DHC8의 특성 (Microbial Diversity of the Trichloroethylene Contaminated Groundwater Treatment System and Characterization of Pseudomonas sp. DHC8)

  • 남지현;신지혜;권기욱;배우근;이동훈
    • 미생물학회지
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    • 제49권4호
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    • pp.336-342
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    • 2013
  • 산업에서 널리 사용되고 있는 Trichloroethylene (TCE)은 토양 및 지하수의 오염을 일으키며, 암 유발물질로 환경에서 반드시 제거해야 하는 물질이다. 본 연구에서는 미생물 고정화 담체를 이용한 TCE로 오염된 지하수 처리 시스템의 세균 군집구조를 조사하고, 우점종을 분리 및 동정하고 TCE 제거특성을 확인하였다. TCE로 오염된 지하수 처리공정의 세균군집을 16S rRNA 유전자 라이브러리의 염기서열 분석방법을 이용하여 조사한 결과, 주요 개체군은 BTEX 분해세균으로 알려진 Pseudomonas 속이었으며 Pseudomonas putida 그룹이 가장 우점하였다. Pseudomonas putida 그룹의 우점은 높은 toluene과 TCE의 농도에서 기인한 것으로 생각된다. TCE로 오염을 제거하기 위한 미생물 반응기에서 toluene과 TCE 분해 세균을 분리 배양하였으며 Pseudomonas sp. DHC8로 명명하였다. 형태학적 특징, 생리 생화학적 특징, 16S rRNA 유전자 염기서열분석 결과 DHC8 균주는 P. putida 그룹에 속하는 것으로 확인되었다. Pseudomonas sp. DHC8을 이용하여 TCE (0.83 mg/L)와 toluene (60.61 mg/L)에 대해 분해실험을 실시하였을 때 12.5시간 동안 TCE는 72.3%, toluene은 100.0% 제거되었다. 또한, TCE와 toluene의 제거속도는 각각 0.02 ${\mu}mol/g$-DCW/h와 2.89 ${\mu}mol/g$-DCW/h였다. 본 연구 결과는 TCE의 생물정화를 위한 반응기의 최대 효율을 유지하기 위한 노력에 도움이 될 것이다.

HA/TCP 골이식재상에 이식된 지방유래 줄기세포의 골모세포로의 분화 및 골형성에 대한 연구 (BONE REGENERATION WITH ADIPOSE TISSUE-DERIVED MESENCHYMAL STEM CELL AND HA/TCP)

  • 임재석;권종진;장현석;이의석;정유민;이태형;박정균
    • Maxillofacial Plastic and Reconstructive Surgery
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    • 제32권2호
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    • pp.97-106
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    • 2010
  • Aim of the study: An alternative source of adult stem cells that could be obtained in large quantities, under local anesthesia, with minimal discomfort would be advantageous. Adipose tissue could be processed to obtain a fibroblast-like population of cells or adipose tissue-derived stromal cells (ATSCs). This study was performed to confirm the availability of ATSCs in bone tissue engineering. Materials amp; Methods: In this study, adipose tissue-derived mesenchymal stem cell was extracted from the liposuctioned abdominal fat of 24-old human and cultivated, and the stem cell surface markers of CD 105 and SCF-R were confirmed by immunofluorescent staining. The proliferation of bone marrow mesenchymal stem cell and ATSCs were compared, and evaluated the osteogenic differentiation of ATSCs in a specific osteogenic induction medium. Osteogenic differentiation was assessed by von Kossa and alkaline phosphatase staining. Expression of osteocyte specific BMP-2, ALP, Cbfa-1, Osteopontin and osteocalcin were confirmed by RT-PCR. With differentiation of ATSCs, calcium concentration was assayed, and osteocalcin was evaluated by ELISA (Enzyme-linked immunosorbant assay). The bone formation by 5-week implantation of HA/TCP block loaded with bone marrow mesenchymal stem cells and ATSCs in the subcutaneous pocket of nude mouse was evaluated by histologic analysis. Results: ATSCs incubated in the osteogenic medium were stained positively for von Kossa and alkaline phosphatase staining. Expression of osteocyte specific genes was also detected. ATSCs could be easily identified through fluorescence microscopy, and bone formation in vivo was confirmed by using ATSC-loaded HA/TCP scaffold. Conclusions: The present results show that ATSCs have an ability to differentiate into osteoblasts and formed bone in vitro and in vivo. So ATSCs may be an ideal source for further experiments on stem cell biology and bone tissue engineering.

Polymorphic Variation in Glutathione-S-transferase Genes and Risk of Chronic Myeloid Leukaemia in the Kashmiri Population

  • Bhat, Gulzar;Bhat, Ashaqullah;Wani, Aadil;Sadiq, Nida;Jeelani, Samoon;Kaur, Rajinder;Masood, Akbar;Ganai, Bashir
    • Asian Pacific Journal of Cancer Prevention
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    • 제13권1호
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    • pp.69-73
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    • 2012
  • Cancer is a complex disease and the genetic susceptibility to it could be an outcome of the inherited difference in the capacity of xenobiotic metabolizing enzymes. Glutathione-S-transferases (GSTs) are phase II metabolizing enzymes whose various genotypes have been associated with increased risk of different types of cancer. Null mutations caused by the deletion of the entire gene result in the absence of the enzymatic activity and increase in the risk of developing cancer including chronic myeloid leukaemia (CML). In the present case-control study we evaluated the effect of null mutations in GSTM1 and GSTT1 genes on the risk of developing CML. The study included 75 CML patients (43 males and 32 females; age (mean ${\pm}$ S.D) $42.3{\pm}13.4$ years) and unrelated non-malignant controls (76 male and 48 females; age (mean ${\pm}$ S.D) $41.5{\pm}12.9$). The distribution of GSTM1 and GSTT1 genotypes in CML patients and controls was assessed by multiplex-PCR method. Logistic regression was used to assess the relationship between GSTM1 and GSTT1 genotypes and risk of CML. Chi-square test was used to evaluate the trend in modulating the risk to CML by one or more potential high risk genotype. Although GSTM1 null genotype frequency was higher in CML patients (41%) than in the controls (35%), it did not reached a statistical significance (OD = 1.32, 95% CI: 0.73-2.40; P value = 0.4295). The frequency of GSTT1 null genotypes was higher in the CML patients (36%) than in the controls (21%) and the difference was found to be statistically significant (OD = 2.12, 95% CI: 1.12-4.02; P value = 0.0308). This suggests that the presence of GSTT1genotype may have protective role against the CML. We found a statistically significant (OD = 3.09, 95% CI: 1.122-8.528; P value = 0.0472) interaction between the GSTM1 and GSTT1 null genotypes and thus individuals carrying null genotypes of both GSTM1 and GSTT1 genes are at elevated risk of CML.

Impact of Adjuvant Chemotherapy in Elderly Breast Patients in Taiwan, A Hospital-Based Study

  • Lee, Hsiu Chuan;Chen, Wei Yu;Huang, Wen Tsung;Cheng, Kuo Chen;Tian, Yu Feng;Ho, Chung Han;Tsao, Chao Jung;Feng, Yin Hsun
    • Asian Pacific Journal of Cancer Prevention
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    • 제17권10호
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    • pp.4591-4597
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    • 2016
  • Purpose: Decisions as to whether to provide adjuvant treatment in older breast cancer patients remains challenging. Side effects of chemotherapy have to be weighed against life expectancy, comorbidities, functional status, and frailty. To aid decision-making, we retrospectively analyzed 110 women with breast cancer treated with a curative intention from 2006 to 2012. Survival data with clinical and pathological parameters were evaluated to address the role of adjuvant chemotherapy in this study population. Method: A total of 110 elderly (>70 years) patients that received mastectomy at two hospitals in Taiwan were observed retrospectively for a medium of 51 months. After mastectomy, patients received conservative treatment or adjuvant chemotherapy, or hormone therapy following clinical guidelines or physician's preference. Data were collected from the cancer registry system. Results: Median age at diagnosis was 75.7 years. Thirty-five percent of patients received adjuvant chemotherapy, these having a significantly younger age ($mean=74.0{\pm}5.3$ vs $77.5{\pm}5.3$, p<0.001) and higher tumor staging (p=0.003) compared with their non-chemotherapy counterparts.Five-year overall survival was non-significantly higher in patients who received adjuvant chemotherapy (with chemotherapy 64.2% vs without chemotherapy 62.6%, p=0.635), while five-year recurrence free survival was non-significantly lower (with chemotherapy 64.1% vs without chemotherapy 90.5%, p=0.80). Conclusions: In this analysis, adjuvant chemotherapy tended to be given to patients with a younger age and higher tumor staging at our institute. It was not associated with any statistically significant improvement in survival and recurrence rate. Until age specific recommendations are available, physicians must use their clinical judgment and assess the tumor biology with the patient's comorbidities to make the best choice. Clinical trials focusing on this critical issue are warranted.

MiR-204 acts as a potential therapeutic target in acute myeloid leukemia by increasing BIRC6-mediated apoptosis

  • Wang, Zhiguo;Luo, Hong;Fang, Zehui;Fan, Yanling;Liu, Xiaojuan;Zhang, Yujing;Rui, Shuping;Chen, Yafeng;Hong, Luojia;Gao, Jincheng;Zhang, Mei
    • BMB Reports
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    • 제51권9호
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    • pp.444-449
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    • 2018
  • Acute myeloid leukemia (AML) is one of the most common hematological malignancies all around the world. MicroRNAs have been determined to contribute various cancers initiation and progression, including AML. Although microRNA-204 (miR-204) exerts anti-tumor effects in several kinds of cancers, its function in AML remains unknown. In the present study, we assessed miR-204 expression in AML blood samples and cell lines. We also investigated the effects of miR-204 on cellular function of AML cells and the underlying mechanisms of the action of miR-204. Our results showed that miR-204 expression was significantly downregulated in AML tissues and cell lines. In addition, overexpression of miR-204 induced growth inhibition and apoptosis in AML cells, including AML5, HL-60, Kasumi-1 and U937 cells. Cell cycle analysis further confirmed an augmentation in theapoptotic subG1 population by miR-204 overexpression. Mechanistically, baculoviral inhibition of apoptosis protein repeat containing 6 (BIRC6) was identified as a direct target of miR-204. Enforcing miR-204 expression increased the luciferase activity and expression of BIRC6, as well as p53 and Bax expression. Moreover, restoration of BIRC6 reversed the pro-apoptotic effects of miR-204 overexpression in AML cells. Taken together, this study demonstrates that miR-204 causes AML cell apoptosis by targeting BIRC6, suggesting miR-204 may play an anti-carcinogenic role in AML and function as a novel biomarker and therapeutic target for the treatment of this disease.

Mitochondrial DNA analysis of ancient human bones excavated from Nukdo island, S.Korea

  • Kim, Ae-Jin;Kim, Ki-Jeong;Choi, Jee-Hye;Choi, Eun-Ha;Jung, Yu-Jin;Min, Na-Young;Lkhagvasuren, Gavaachimed;Rhee, Sang-Myung;Kim, Jae-Hyun;Noh, Maeng-Seok;Park, Ae-Ja;Kim, Kyung-Yong;Kang, Yoon-Sung;Lee, Kwang-Ho;Kim, Keun-Cheol
    • BMB Reports
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    • 제43권2호
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    • pp.133-139
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    • 2010
  • We have performed analyses using ancient DNA extracted from 25 excavated human bones, estimating around the 1st century B.C. Ancient human bones were obtained from Nukdo Island, which is located off of the Korean peninsula of East Asia. We made concerted efforts to extract ancient DNA of high quality and to obtain reproducible PCR products, as this was a primary consideration for this extensive kind of undertaking. We performed PCR amplifications for several regions of the mitochondrial DNA, and could determine mitochondrial haplogroups for 21 ancient DNA samples. Genetic information from mitochondrial DNA belonged to super-haplogroup M, haplogroup D or its sub-haplogroups (D4 or D4b), which are distinctively found in East Asians, including Koreans or Japanese. The dendrogram and principal component analysis based on haplogroup frequencies revealed that the Nukdo population was close to those of the East Asians and clearly distinguished from populations shown in the other regions. Considering that Nukdo is geologically isolated in the southern part of the Korean peninsula and is a site of commercial importance with neighboring countries, these results may reflect genetic continuity for the habitation and migration of ethnic groups who had lived in a particular area in the past. Therefore, we suggest that phylogenetic analyses of ancient DNA have significant advantages for clarifying the origins and migrations of ethnic groups, or human races.

밀 형질전환과 이를 활용한 최신 연구동향 (Current Research Trends of Wheat Transformation and Biotechnology)

  • 심재령;김세원;이수빈;김범기;이샛별;이종렬
    • 한국작물학회지
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    • 제65권4호
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    • pp.386-398
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    • 2020
  • 밀은 세계 3대 작물 중 하나이고, 전 세계 인구가 소비하는 영양 칼로리의 20%를 담당하는 등 중요한 식량작물이지만 이질 6배체의 복잡한 염색체와 약 16 Gb의 방대한 유전체 크기로 인해 다른 작물들에 비해 분자생물학 및 생명공학연구가 많이 부족한 상황이다. 최근 최신의 차세대염기서열분석법에 의한 밀 유전체 분석이 이루어져 유용한 유전자를 쉽게 얻을 수 있게 되어 여러 방면에서 밀 생명공학연구가 가속화 되고 있다. 본 리뷰에서는 밀의 유전자의 기능을 밝혀 새로운 기능의 생명공학 밀을 육성하는데 필수 불가결한 기술인 밀 형질전환에 대해 상세히 기술하였다. 또한 밀 생명공학기술과 형질전환에 의해 전통육종에 의해 해결하기 어려운 식물병, 비생물학적 스트레스 및 밀 관련 질환을 극복하기 위한 최신의 연구 결과에 대해 서술하였다.

Oral Toxicity Study and Skin Sensitization Test of a Cricket

  • Ryu, Hyeon Yeol;Lee, Somin;Ahn, Kyu Sup;Kim, Hye Jin;Lee, Sang Sik;Ko, Hyuk Ju;Lee, Jin Kyu;Cho, Myung-Haing;Ahn, Mi Young;Kim, Eun Mi;Lim, Jeong Ho;Song, Kyung Seuk
    • Toxicological Research
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    • 제32권2호
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    • pp.159-173
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    • 2016
  • Crickets have been attracting considerable interest in the field of nutrition and toxicology due to the global exhaustion of food resulting from a growing population. The cricket is normally eaten in several countries after roasting, similar to the grasshopper; however, safety evaluation data on cricket powder is limited. Here, we performed general toxicity studies of cricket powder including a single, 2-week repeated dose range evaluation test, a 13-week repeated oral dose toxicity test in Sprague-Dawley rats, a single oral dose toxicity test in Beagle dogs, and a skin sensitization test in guinea pigs following the Organization for Economic Cooperation and Development test guidelines 406 and 408 in addition to Good Laboratory Practice. To investigate the NOAEL and target organs of cricket powder, Sprague-Dawley rats were allocated to 4 groups: vehicle control, 1,250 mg/kg, 2,500 mg/kg, 5,000 mg/kg dose test groups and cricket powder was administered over 13 weeks after single dose and dose range finding studies in rats based on the results of the single oral administration toxicity study in rats and Beagle dogs. The results of the study showed that the NOAEL of cricket powder was over 5,000 mg/kg for both sexes of rats without adverse effects in a 13-week repeated oral toxicity study and there was no skin hypersensitivity reaction. Therefore, our results reveal that crickets can be widely used as a new substitute food or nutrient resource.

Association Analysis of Monocyte Chemotactic Protein-3 (MCP3) Polymorphisms with Asthmatic Phenotypes

  • Park, Byung-Lae;Kim, Lyoung-Hyo;Choi, Yoo-Hyun;Cheong, Hyun-Sub;Park, Hae-Sim;Hong, Soo-Jong;Choi, Byoung-Whui;Lee, June-Hyuk;Uh, Soo-Taek;Park, Choon-Sik;Shin, Hyoung-Doo
    • BMB Reports
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    • 제38권1호
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    • pp.77-81
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    • 2005
  • The monocyte chemotactic protein-3 (MCP3), on chromosome 17q11.2-q12, is a secreted chemokine, which attracts macrophages during inflammation and metastasis. In an effort to discover additional polymorphism(s) in genes whose variant(s) have been implicated in asthma, we scrutinized the genetic polymorphisms in MCP3 to evaluate it as a potential candidate gene for asthma host genetic study. By direct DNA sequencing in twenty-four individuals, we identified four sequence variants within the 3 kb full genome including 1,000bp promoter region of MCP3; one in promoter region (-420T>C), three in intron (+136C>G, +563C>T, +984G>A) respectively. The frequencies of those four SNPs were 0.020 (-420T>C), 0.038 (+136C>G), 0.080 (+563C>T), 0.035 (+984G>A), respectively, in Korean population (n = 598). Haplotypes, their frequencies and linkage disequilibrium coefficients (|D'|) between SNP pairs were estimated. The associations with the risk of asthma, skin-test reactivity and total serum IgE levels were analyzed. Using statistical analyses for association of MCP3 polymorphisms with asthma development and asthma-related phenotypes, no significant signals were detected. In conclusion, we identified four genetic polymorphisms in the important MCP3 gene, but no significant associations of MCP3 variants with asthma phenotypes were detected. MCP3 variation/haplotype information identified in this study will provide valuable information for future association studies of other allergic diseases.