• Title/Summary/Keyword: bio information

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A study on characteristics of combustion and exhaust emissions on bio-diesel fuel in marine diesel generator engine (Low load centering) (선박용 디젤발전기에서 바이오연료의 연소 및 배기배출물 특성에 관한 연구 (저부하 영역 중심으로))

  • Cho, Sang-Gon
    • Journal of Advanced Marine Engineering and Technology
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    • v.39 no.7
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    • pp.716-721
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    • 2015
  • As the severity of environmental pollution has increased, restrictions on air pollution have been strengthened. Stringent regulations have been imposed, not only on marine diesel engines but also on automotive and industrial power plants. Thus, biofuels have been directly applied in practical engines and used in training ships for basic research. Even though a high biofuel percentage cannot be used in a training ship engine for safety reasons, because this type of engine is larger than those used in institutional laboratories, the results will provide important basic information that will allow organizations to determine the status of a large output. Biodiesel fuel was studied to determine how it would affect the combustion characteristics and exhaust emissions of a marine diesel generator engine. The main results can be summarized as follows. Because the physical and chemical compositions of biofuels are similar to those of diesel fuel, it was found that their practical use was possible in a training ship. The specific fuel consumption and NOx increased, whereas a tendency was found for carbon monoxide and soot to decrease. In addition, no significant pressure change difference was found between the diesel fuel and biofuels.

The Effects of Stress Related Genes on Carcass Traits and Meat Quality in Pigs

  • Jin, H.J.;Park, B.Y.;Park, J.C.;Hwang, I.H.;Lee, S.S.;Yeon, S.H.;Kim, C.D.;Cho, C.Y.;Kim, Y.K.;Min, K.S.;Feng, S.T.;Li, Z.D.;Park, C.K.;Kim, C.I.
    • Asian-Australasian Journal of Animal Sciences
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    • v.19 no.2
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    • pp.280-285
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    • 2006
  • The current study was conducted to investigate the relationship between stress related gene and meat quality in pigs. A total number of 212 three-way cross bred (Landrace-$Yorkshire{\times}Duroc$) and 38 Duroc were sampled from the Korean pig industry to determine genotype frequency of porcine stress syndrome (PSS) and heat shock protein 70 kDa (HSP70) genes and their relationship with carcass traits and longissimus meat quality. Screen of HSP70 was performed by the single strand conformation polymorphism (SSCP) technique. Based on the analysis of restriction fragment length polymorphism (RFLP) in ryanodine receptor 1 (RYR1) gene, genetic disorder of PSS was related to a mutation at $18,168^{th}$ (C to T) of exon 17. There was no significant difference in ultimate meat pH and backfat thickness between HSP70 K1-AA type and -BB type in pure Duroc breed. In Landrace-$Yorkshire{\times}Duroc$ (L-$Y{\times}D$) cross bred pig, our results indicated that HSP70 derivate type in Duroc had a limited effect on backfat thickness, but L-$Y{\times}D$ type had a noticeable linkage with HSP70 K1-AA and K3-AB. This tendency was also observed in hot carcass weight where HSP70 K1-AA and K3-AB resulted in heavier weight with 86.3 kg compared to HSP70 K1-AB and K3-BB of 74.3 kg. Results imply that stress related HSP70 genotype has a potential association with backfat thickness and carcass weight.

Bacterial Hash Function Using DNA-Based XOR Logic Reveals Unexpected Behavior of the LuxR Promoter

  • Pearson, Brianna;Lau, Kin H.;Allen, Alicia;Barron, James;Cool, Robert;Davis, Kelly;DeLoache, Will;Feeney, Erin;Gordon, Andrew;Igo, John;Lewis, Aaron;Muscalino, Kristi;Parra, Madeline;Penumetcha, Pallavi;Rinker, Victoria G.;Roland, Karlesha;Zhu, Xiao;Poet, Jeffrey L.;Eckdahl, Todd T.;Heyer, Laurie J.;Campbell, A. Malcolm
    • Interdisciplinary Bio Central
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    • v.3 no.3
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    • pp.10.1-10.8
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    • 2011
  • Introduction: Hash functions are computer algorithms that protect information and secure transactions. In response to the NIST's "International Call for Hash Function", we developed a biological hash function using the computing capabilities of bacteria. We designed a DNA-based XOR logic gate that allows bacterial colonies arranged in a series on an agar plate to perform hash function calculations. Results and Discussion: In order to provide each colony with adequate time to process inputs and perform XOR logic, we designed and successfully demonstrated a system for time-delayed bacterial growth. Our system is based on the diffusion of ${\ss}$-lactamase, resulting in destruction of ampicillin. Our DNA-based XOR logic gate design is based on the op-position of two promoters. Our results showed that $P_{lux}$ and $P_{OmpC}$ functioned as expected individually, but $P_{lux}$ did not behave as expected in the XOR construct. Our data showed that, contrary to literature reports, the $P_{lux}$ promoter is bidirectional. In the absence of the 3OC6 inducer, the LuxR activator can bind to the $P_{lux}$ promoter and induce backwards transcription. Conclusion and Prospects: Our system of time delayed bacterial growth allows for the successive processing of a bacterial hash function, and is expected to have utility in other synthetic biology applications. While testing our DNA-based XOR logic gate, we uncovered a novel function of $P_{lux}$. In the absence of autoinducer 3OC6, LuxR binds to $P_{lux}$ and activates backwards transcription. This result advances basic research and has important implications for the widespread use of the $P_{lux}$ promoter.

Effects of Water Temperature, Salinity and Irradiance on the Growth of Harmful Dinoflagellate Cochlodinium polykrikoides Margelef isolated from South Sea of Korea in 2008 (2008년 한국 남해안에서 분리한 유해 와편모조류 Cochlodinium polykrikoides Margelef의 성장에 미치는 수온, 염분 그리고 광조건의 영향)

  • Oh, Seok-Jin;Kim, Chang-Hoon;Kwon, Hyeong-Kyu;Yang, Han-Soeb
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.43 no.6
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    • pp.715-722
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    • 2010
  • The effects of temperature, salinity and irradiance on the growth of the harmful red tide dinoflagellate Cochlodinium polykrikoides Margelef isolated from the South Sea of Korea were examined in the laboratory. Growth was examined under the following combinations of temperature and salinity: 15, 20, 25 and $30^{\circ}C$, and 15, 20, 25, 30 and 35 psu at a constant irradiance of $180\;{\mu}mol/m^2/s$. No growth was observed with a temperature of $15^{\circ}C$ and a salinitiy of 15 psu. Moderate growth rates of more than 0.30 /day were obtained at $25^{\circ}C$ with salinities of 25.35 psu. These values are similar to in situ observations for this species. The maximum growth rate, 0.35 /day, was obtained at $25^{\circ}C$ and 30 psu. In light experiments, cell growth of C. polykrikoides was conducted with constant temperature ($20^{\circ}C$) and salinity (30 psu) under light photon flux densities (PFD) of 10, 25, 50, 70, 100, 150, 250 and $350\;{\mu}mol/m^2/s$. C. polykrikoides did not grow at $10\;{\mu}mol/m^2/s$. Cell growth was observed at irradiance values of $25\;{\mu}mol/m^2/s$ and above. The irradiance-growth curve was described as ${\mu}=0.30{\cdot}(I-15.27)/(I+27.22)$, (r=0.99). This suggests a compensation PFD of $15.27\;{\mu}mol/m^2/s$ and a maximum growth rate of 0.30 /day. In conclusion, C. polykrikoides prefers high salinity, temperature and irradiance in summer in Korea. These results provide important information for understanding the mechanism of C. polykrikoides blooms and developing technology to predict blooms of this organism in the field.

Development of Techniques for Testicular Germ Cell Transplantation in Pigs (돼지에 있어서 정소 생식세포의 이식 기법 개발)

  • Kim, Byung-Gak;Lee, Yong-An;Kim, Bang-Jin;Kim, Ki-Jung;Min, Kwan-Sik;Lee, Jang-Hee;Ryu, Jae-Weon;Kim, In-Cheul;Ryu, Buom-Yong
    • Reproductive and Developmental Biology
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    • v.32 no.3
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    • pp.193-198
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    • 2008
  • The current study was designed to extend the technique of spermatogonial transplantation to economically important pig model We evaluated the efficiency of pig to pig transplantation. Donor testis cells were harvested from testes obtained at castration of 10- to 14-day-old boars and were labeled with fluorescent marker(PKH26) before transplantation. The presence of infused dye or labeled pig testicular cells was confirmed in the seminiferous tubules from recipient pig. The most effective procedure of intratubular germ cell transfer was to insert an fine needle ($21{\sim}25$ gauge) through the cauda epididymis and testis into the rete testis under ultrasound guidance. Infusion of $5{\sim}7ml$ of dye solution or cell suspension could fill the rete and up to 50% of seminiferous tubules of 14-week-old boars. Testis were examined for the presence and localization of labeled donor cells immediately after transplantation and labeled donor cells were found in numerous seminiferous tubules from recipient pig testes. These results indicate that germ cell transplantation is feasible in recipient pig testis. This study represents successful spermatogonial transplantation between individual animals in a livestock species.

A Comparative Study on the Determinants Priority of the Royalty in National R&D Project: Focused on the Case of 'N' Center's Technology Transfer (국책 연구 성과의 유상 기술이전 시 기술공급 기관과 기술도입 기업 간 기술료 결정요인 비교에 관한 연구 : N 사업단에 참여한 대학과 중소기업 사례를 중심으로)

  • Baek, Jong-il;Hyun, Byung-hwan
    • Journal of Korea Technology Innovation Society
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    • v.20 no.2
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    • pp.430-457
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    • 2017
  • The purpose of this study is to present meaningful information and policy implications concerning the determinants of royalties of technology transfer to stakeholder. To identify key determinants of royalties in technology transfer, this study conducted AHP survey analysis (Survey period: 01/09~31/10, 2016) of 96 government-funded research centers and 85 companies which were participants of the R&D project "Next Generation BioGreen21" of R.D.A in the "N" center from 2011 to 2015. Research results show that both parties acknowledge 'Technical considerations for determining the profitability of the technologies' and 'The interest and willingness of the management group' as critical factors for the determinants of royalties. The difference of each party is that private companies acknowledge 'Available budget plan' as a critical factor while the government-funded research centers value 'Market competitiveness'. These findings suggest four main policy implications which are the investigation of technological demands reflecting specific needs of industrial sites, the diversification of royalty payments for private companies, the differentiated research evaluation system for the purpose of technology transfer and the planning of public R&D project reflecting research time span of private companies.

Development of Quantification Method for Bioluminescence Imaging (발광영상에 대한 정량화 방법 개발)

  • Kim, Hyeon-Sik;Choi, Eun-Seo;Tak, Yoon-O;Choi, Heung-Kook;Lee, Ju-Young;Min, Jung-Joon;Lee, Byeong-Il
    • Nuclear Medicine and Molecular Imaging
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    • v.43 no.5
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    • pp.451-458
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    • 2009
  • Purpose: Optical molecular luminescence imaging is widely used for detection and imaging of bio-photons emitted by luminescent luciferase activation. The measured photons in this method provide the degree of molecular alteration or cell numbers with the advantage of high signal-to-noise ratio. To extract useful information from the measured results, the analysis based on a proper quantification method is necessary. In this research, we propose a quantification method presenting linear response of measured light signal to measurement time. Materials and Methods: We detected the luminescence signal by using lab-made optical imaging equipment of animal light imaging system (ALIS) and different two kinds of light sources. One is three bacterial light-emitting sources containing different number of bacteria. The other is three different non-bacterial light sources emitting very weak light. By using the concept of the candela and the flux, we could derive simplified linear quantification formula. After experimentally measuring light intensity, the data was processed with the proposed quantification function. Results: We could obtain linear response of photon counts to measurement time by applying the pre-determined quantification function. The ratio of the re-calculated photon counts and measurement time present a constant value although different light source was applied. Conclusion: The quantification function for linear response could be applicable to the standard quantification process. The proposed method could be used for the exact quantitative analysis in various light imaging equipments with presenting linear response behavior of constant light emitting sources to measurement time.

Id3 mRNA Expression on Folliculogenesis in Rat Ovary (쥐 난소에서 난포 발달에 따른 Id3 mRNA의 발현)

  • Hwang, Seong-Soo;Ko, Yeoung-Gyu;Lim, Hyun-Joo;Seong, Hwan-Hoo;Yoon, Jong-Taek;Min, Kwan-Sik
    • Reproductive and Developmental Biology
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    • v.31 no.3
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    • pp.181-186
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    • 2007
  • Inhibitor of DNA binding protein or inhibitor of differentiation(Id) is largely considered as positive and/or negative regulators of proliferation, differentiation, angiogeneisis, and apoptosis. The four Id genes(Id1, Id2, Id3, and Id4) were known in mammals. However, little is known about the expression and function of these genes in reproductive physiology. Among them, this study was conducted to analyze the expression pattern of Id3 mRNA on folliculogenesis in rat ovary. After PMSG administration, the ovaries were obtained at 3, 6, 12, 24, 36, and 48hrs, fixed, dehydrated, and paraffin embedded. For in situ hybridization, anti-sense and sense Id3 cRNA probes were prepared and applied to the ovarian section. The ovarian sections were coated with NTB-2 emulsion. After that, the slides were developed and counterstained with hematoxylin and eosin staining. The hybridization signal was estimated on a scale of 1+ to 4+. In oocyte, the intensity of Id3 mRNA in primordial and primary follicles was scored at ${\geq}2+$, but the intensity was less than 1+ in secondary, dominant, and preovulatory follicles. In granulosa cells, the Id3 mRNA was strongly expressed(3+ or 4+) in dominant and preovulatory follicles. Taken together, Id3 mRNA was expressed specifically at follicle stages and follicular tissue and might be closely related with follicle development.

Comparative Analysis of Muscle Proteome from Porcine White and Red Muscles by Two-dimensional Electrophoresis (이차원전기영동법을 이용한 white muscle과 red muscle간의 단백질 발현양상의 비교분석)

  • Kim, N.K.;Joh, J.H.;Chu, K.S.;Park, H.R.;Park, B.Y.;Kim, O.H.;Lee, C.S.
    • Journal of Animal Science and Technology
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    • v.45 no.5
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    • pp.731-738
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    • 2003
  • The technique known as proteomics is useful for characterizing the protein expression pattern of a particular tissue or cell type as well as quantitatively identifying differences in the levels of individual proteins. In present study, we carried out the comparative expression patterns of white and red muscles. We used the two-dimensional electrophoresis(2-DE) for analyzing the protein expression. Proteins isolated from porcine white and red muscles were separated by 12% poly-acrylamide gel and then were detected by coomassie blue and silver staining. More than 600 protein spots were detected on each 2-DE gel. By visual analysis of the stained gel, five proteins were identified to be differentially expressed in the white vs red muscle. By database searching based on the molecular weights and pI(isoelectric point) of the five proteins, three of them were found to be most close to troponin I, T and myoglobin. However, further researche is needed for identification and functional analysis of the unidentified proteins. In conclusion, we found five proteins, which are differentially expressed in the white vs red muscle. The functional analysis of the differentially expressed proteins will provide valuable information on biochemical characteristics of the muscle type.

Improved Vapor Recognition in Electronic Nose (E-Nose) System by Using the Time-Profile of Sensor Array Response (센서 응답의 Time-Profile 을 이용한 전자 후각 (E-Nose) 시스템의 Vapor 인식 성능 향상)

  • Yoon Seok, Yang
    • Journal of Biomedical Engineering Research
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    • v.25 no.5
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    • pp.329-334
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    • 2004
  • The electronic nose (E-nose) recently finds its applications in medical diagnosis, specifically on detection of diabetes, pulmonary or gastrointestinal problem, or infections by examining odors in the breath or tissues with its odor characterizing ability. The odor recognition performance of E-nose can be improved by manipulating the sensor array responses of vapors in time-profile forms. The different chemical interactions between the sensor materials and the volatile organic compounds (VOC's) leave unique marks in the signal profiles giving more information than collection of the conventional piecemal features, i.e., maximum sensitivity, signal slopes, rising time. In this study, to use them in vapor recognition task conveniently, a novel time-profile method was proposed, which is adopted from digital image pattern matching. The degrees of matching between 8 different vapors were evaluated by using the proposed method. The test vapors are measured by the silicon-based gas sensor array with 16 CB-polymer composites installed in membrane structure. The results by the proposed method showed clear discrimination of vapor species than by the conventional method.