• Title/Summary/Keyword: Repeat Response

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Characterization of a Stress-Responsive Ankyrin Repeat-Containing Zinc Finger Protein of Capsicum annuum (CaKR1)

  • Seong, Eun-Soo;Choi, Do-Il;Cho, Hye-Sun;Lim, Chun-Keum;Cho, Hye-Jeong;Wang, Myeong-Hyeon
    • BMB Reports
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    • v.40 no.6
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    • pp.952-958
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    • 2007
  • We isolated many genes induced from pepper cDNA microarray data following their infection with the soybean pustule pathogen Xanthomonas axonopodis pv. glycines 8ra. A full-length cDNA clone of the Capsicum annuum ankyrin-repeat domain $C_3H_1$ zinc finger protein (CaKR1) was identified in a chili pepper using the expressed sequence tag (EST) database. The deduced amino acid sequence of CaKR1 showed a significant sequence similarity (46%) to the ankyrin-repeat protein in very diverse family of proteins of Arabidopsis. The gene was induced in response to various biotic and abiotic stresses in the pepper leaves, as well as by an incompatible pathogen, such as salicylic acid (SA) and ethephon. CaKR1 expression was highest in the root and flower, and its expression was induced by treatment with agents such as NaCl and methyl viologen, as well as by cold stresses. These results showed that CaKR1 fusion with soluble, modified green fluorescent protein (smGFP) was localized to the cytosol in Arabidopsis protoplasts, suggesting that CaKR1 might be involved in responses to both biotic and abiotic stresses in pepper plants.

Treatment of Ovarian Disorder in Repeat Breeder Cows after Diagnosis by Ultrasonography (초음파검사를 이용한 저수태우의 난소질환 진단과 GnRH 또는 $\textrm{PGF}_{2a}$의 처치효과)

  • 윤기영;용환율;박종임;신태영;노상호;이병천;황우석
    • Journal of Embryo Transfer
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    • v.13 no.1
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    • pp.21-28
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    • 1998
  • From September 1993 to August 1997, we treated ovarian disorders in 1,782 repeat breeder cows after diagnosis by ultrasound on 35 farms in Kyeong-ki do. The rates of ovarian appearance were 59.8% of CL group, 16.7% of ovarian atrophy or hypofunction, 15.4% of luteal cyst, 4.3% of follicular cyst and 3.7% of follicle group in diagnosis with rectal palpation and ultrasound. The results of treatment for ovarian disorders were 1,316 cows(73.8%) in estrus, 348 cows(19.5%) in non-detected and 118 cows(6.6%) in unidentified. The rates of PGF$_2$$\alpha$, GnRH and mineral vitamin complex treatment to estrus were 79.6, 69.2 and 50.3%. Two groups were treated with 5 ml PGF$_2$$\alpha$ intramuscular injection(I.M.) and 1.5 ml PGF$_2$$\alpha$ intraovarian injection(I.O.), and the results of 1.5ml PGF$_2$$\alpha$ I.0. were significantly higher than that of 5ml PGF$_2$$\alpha$ I.M. in inductiom estrus(p<0.05). The pregnant rates were 29.8% in total repeat breeder cows with ovarian disorders following diagnosis and treatment. In summary, rectal palpation and ultrasonography were proven to be useful tools of diagnosis and treatment in ovarian disorders, and it was also suggested that the response to treatment with PGF$_2$$\alpha$ I.0. was better than PGF$_2$$\alpha$ I.M.

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Ankyrin Repeat-Rich Membrane Spanning (ARMS)/Kidins220 Scaffold Protein Regulates Neuroblastoma Cell Proliferation through p21

  • Jung, Heekyung;Shin, Joo-Hyun;Park, Young-Seok;Chang, Mi-Sook
    • Molecules and Cells
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    • v.37 no.12
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    • pp.881-887
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    • 2014
  • Cell proliferation is tightly controlled by the cell-cycle regulatory proteins, primarily by cyclins and cyclin-dependent kinases (CDKs) in the $G_1$ phase. The ankyrin repeat-rich membrane spanning (ARMS) scaffold protein, also known as kinase D-interacting substrate of 220 kDa (Kidins 220), has been previously identified as a prominent downstream target of neurotrophin and ephrin receptors. Many studies have reported that ARMS/Kidins220 acts as a major signaling platform in organizing the signaling complex to regulate various cellular responses in the nervous and vascular systems. However, the role of ARMS/Kidins220 in cell proliferation and cell-cycle progression has never been investigated. Here we report that knockdown of ARMS/Kidins220 inhibits mouse neuroblastoma cell proliferation by inducing slowdown of cell cycle in the $G_1$ phase. This effect is mediated by the upregulation of a CDK inhibitor p21, which causes the decrease in cyclin D1 and CDK4 protein levels and subsequent reduction of pRb hyperphosphorylation. Our results suggest a new role of ARMS/Kidins220 as a signaling platform to regulate tumor cell proliferation in response to the extracellular stimuli.

An In-depth Analysis of the Result of the International Comparative Study of Mathematics (학업 성취도 국제 비교 연구에 나타난 우리나라 학생들의 수학 성취도 심층 분석)

  • Park Kyung Mee
    • Journal of Educational Research in Mathematics
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    • v.14 no.4
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    • pp.387-401
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    • 2004
  • The recent international comparative studies such as PISA(Program for International Student Assessment) and TIMSS-R(Third International Mathematics and Science Study-Repeat) provide results of relative mathematics achievement of participating countries. The purpose of this paper is to compare the mathematics results of PISA and TIMSS-R. To make PISA and TIMSS-R results comparable, they were standardized. The close investigation of these standardized results reveals that the two Asian countries(Korea and Japan) and several English speaking countries have the commonality in mathematics achievement. Thus this study looks for patterns and similarities within a group of Asian countries(Korea and Japan) and Western countries(the U.S and Australia) by in-depth analysis of PISA mathematics achievement based on item response theory. As a result, it was noted that Western countries tend to perform well on open constructed items and are likely to perform better when an item involves less formal mathematics. On the other hand, Asian countries perform well when an item involves numeric or algebraic computation related to curriculum-based content, but they are relative poor at an item calls for verbal explanations or interpretations of graphs.

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A Retinoid Antagonist Inhibits the Retinoic Acid Response Element that Located in the Promoter Region of the Cytomegalovirus

  • Lee, Mi-Ock;Ahn, Ju-Mi;Han, Sun-Young
    • Biomolecules & Therapeutics
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    • v.6 no.3
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    • pp.276-282
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    • 1998
  • Retinoids regulate a wide variety of biological processes such as cellular proliferation and differentiation in many cell types. They have also shown to stimulate replication of several viruses including human cytomegalovirus (CMV). Retinoid signalling pathway involves two distinct subfamilies of nuclear receptors, retinoic acid receptors (RARs) and retinoid X receptors (RXRs) that bind to specific retinoic acid response elements (RAREs) in the promoter regions of retinoid-target genes. Here, we characterized RAREs in the regulatory regions of the CMV and of the hepatitis B vi.us (HBV). The viral RAREs, i.e., CMV-RARE and HBV-RARE, are composed of two consensus RARE half-sites (A/GGGTCA) arranged as a direct repeat separated by 5-bp and 1-bp, respectively. The RAREs were activated by both RAR/RXR heterodimers and RXR homodimers in transient transfection experiments. We also found that COUP-TF$\alpha$ (chicken ovalbumin upstream promoter-transcription factor u) and COUP-TF$\beta$ repressed the retinoid response of the viral elements. Further we demonstrated that previously known retinoid antagonist, SRI 1330, repressed retinoid-induced transactivation of the CMV-RARE. These results implicate Vitamin A, it's nuclear receptors and COUP-TFs as important regulators of the CMV and HBV pathogenesis and the SRl1330 as potential negative modulator of such retinoid-dependent processes.

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Analysis of Dynamic Responses for Steel Box Girder and I-girder Bridges under Train Loads (강합성 상자형교 및 소수주형 I형 거더교의 철도차량에 대한 동특성 해석)

  • Choi, Dong-Ho;Na, Ho-Sung;Ahn, Gi-Chul;Kim, Ok-Yeon
    • Proceedings of the KSR Conference
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    • 2011.05a
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    • pp.954-959
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    • 2011
  • The intensity of train load in the railway bridges is relatively large and continues to repeat. Also, the speed of vehicles is very fast. For these reasons, analyses for dynamic response under train load are necessary in the railway bridges. In other words, the dynamic characteristics of steel-composite bridges under train loads should be investigated considering effects of dynamic responses such as vibrations, repeated displacements and acceleration of bridge members. Therefore, in this study, static and dynamic analyses for the steel box girder bridges and I-girder bridges are carried out. Based on analyses results, we investigated and compared dynamic response considering the impact factors of domestic and foreign design specifications.

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Ligand Recognition by the Toll-like Receptor Family

  • Jin, Mi-Sun;Lee, Jie-Oh
    • Animal cells and systems
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    • v.13 no.1
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    • pp.1-8
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    • 2009
  • Toll-like receptor (TLR) family proteins, type I transmembrane proteins, play a central role in human innate immune response by recognizing common structural patterns in diverse molecules from bacteria, viruses and fungi. Recently four structures of the TLR and ligand complexes have been determined by high resolution x-ray crystallographic technique. In this review we summarize reported structures of TLRs and their proposed activation mechanisms. The structures demonstrate that binding of agonistic ligands to the extracellular domains of TLRs induces homo- or heterodimerization of the receptors. Dimerization of the TLR extracellular domains brings their two C-termini into close proximity. This suggests a plausible mechanism of TLR activation: ligand induces dimerization of the extracellular domains, which enforces juxtaposition of intracellular signaling domains for recruitment of intracellular adaptor proteins for signal initiation.

A study on design of Self-Organizing Fuzzy Logic Controller (자기 조정 퍼지 로직 제어기 설계에 관한 연구)

  • Hur, Kwan;Lee, Sang-Hyuk
    • Proceedings of the KIEE Conference
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    • 1994.11a
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    • pp.342-344
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    • 1994
  • This paper presents a design technique of SOFLC(Self -Organizing Fuzzy Logic Controller). It is composed of three parts: FLC(Fuzzy Logic Controller) part, RPO (Repeat Parameter Organizing) part, and RTPO (Real Time Parameter Organizing) part. The FLC part is controlled by initial parameters ($a_1$, $a_2$, $a_3$, $b_1$, $b_2$, $b_3$) the RPO part improves parameters by evaluating the performance of control responses controlled by FLC, and the RTPO organizes the parameters for real time in order to have the same value of the control response($y_k$) and the target response($y_k\;^*$).

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Response of Repeated Cycle of Ovulation Induction in Human in Vitro Fretilization and Gamete Intra-Fallopian Transfer (인간난자 체외수정 및 생식자 난관내이식술의 반복주기에서 과배란유도반응에 관한 연구)

  • Shin, Yong-Duk;Kim, Jung-Gu;Moon, Shin-Yong;Lee, Jin-Yong;Chang, Yoon-Seok
    • Clinical and Experimental Reproductive Medicine
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    • v.14 no.2
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    • pp.101-108
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    • 1987
  • In order to evaluate the consistency of the serum estradiol pattern and response and to determine the influence of number of ovary on them in repeat cycles in the same patient, 57 cycles in 24 patients who underwent in Vitro Fertilization-Embryo Transfer or Gamete Intrafallopian Transfer in Seoul National University Hospital. The patients were stimulated by follicular stimulating hormone and human menopausal gonadotropin and classified as high(${\geqq}$400 pg/ml) and low(<400 pg/ml) response group according to preovulatory estradiol concentration and classified as three estradiol patterns (A,G.B) according to Jones criteria. Seventeen(89.5%) of 19 patients in when a high response to ovulation induction in their first cycle showed a high response. 40%(2/5) of the second ovulation induction cycle were low response in the patient whose first cycle resulted resulted in a low response. Serum estradiol pattern in the first ovulation induction cycle tended to be repeated in the second cycle. Women with high response tended to be more likely to have A and G patterns and less likely to have a cancellation than those with low response. One-ovary patients were at higher risk for inadequate ovulation induction response.

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A Relative Effectiveness of Item Types for Estimating Science Ability in TIMSS-R (문항 유형에 따른 과학 능력 추정의 효율성 비교)

  • Park, Chung;Hong, Mi-Young
    • Journal of The Korean Association For Science Education
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    • v.22 no.1
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    • pp.122-131
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    • 2002
  • Recently, performance assessment that makes growing use of free response items in a large scale assessment has been emphasized. This study is an empirical examination of the effectiveness of free response items in comparison with multiple choice items. Using the information function in Item Response Theory (IRT) framework, item information of free response items and multiple-choice items from the Third International Mathematics and Science Study-Repeat (TlMSS-R) were obtained. Test information of the whole science area as well as each area of science contents was computed. On average, free response items yielded more information than multiple choice items, especially in earth science, physics, chemistry, and life science. This study also showed that free response items were appropriate for students in high science ability. Also, free response items estimated students' science ability more accurately than multiple choice items with smaller number of free response items.