• Title/Summary/Keyword: MLVA

Search Result 7, Processing Time 0.026 seconds

MLVA typing of Brucella canis isolated from dogs in Gyeongbuk province, Korea (경북지역 개에서 분리된 Brucella canis의 MLVA-16 typing)

  • Kim, Seong-Guk;Sohn, Joon-Hyung;Jang, Young-Sul;Kim, Sang-Yoon
    • Korean Journal of Veterinary Service
    • /
    • v.35 no.4
    • /
    • pp.275-281
    • /
    • 2012
  • Canine brucellosis is the zoonosis in worldwide and Brucella (B.) canis is a facultative intracellular pathogen that has a very limited host. MLVA-16 (Multilocus VNTR analysis) is a efficient method for genotyping of Brucella species. Various methods have been established for genotyping of Brucella species, but most of analytical method is lack reproducibility and limited capability to differentiate them. B. canis isolates (n=73) from 7 farms in Gyeongbuk province in 2003~2010 were analyzed using 16 VNTR loci. Automatic electrophoresis system was utilized for more high throughput and rapid simple discrimination. Thirty two genotypes were identified from 73 B. canis isolates. MLVA could contribute to molecular typing for epidemiological evaluation of canine brucellosis.

Analysis of Contamination Sources of Staphylococcus aureus Related to Perilla Leaves Using Multi-Locus Variable Number of Tandem Repeat Analysis (MLVA) (Multi-Locus Variable Number of Tandem Repeat Analysis (MLVA)를 이용한 들깻잎 중 Staphylococcus aureus의 오염원분석)

  • Kim, Se-Ri;Shim, Won-Bo;Han, Noo Ri;Chung, Duck-Hwa
    • Journal of Food Hygiene and Safety
    • /
    • v.29 no.4
    • /
    • pp.278-284
    • /
    • 2014
  • To investigate the prevalence of Staphylococcus aureus (S. aureus) during production of perilla leaves, a total of 261 samples, including water, soil, surroundings of cultivation and packing, workers, and perilla leaves, was examined.. To trace the contamination sources of S. aureus related to perilla leaves, MLVA (Multi-Locous Variable number of tandem repeat Analysis), which is a very efficient method to discriminate strains with minimum molecular biology equipment was applied to S. aureus isolated from perilla leaves farms. S. aureus was isolated in perilla leaves from 9 of 38 farms at 0-2.92 log CFU/g. S. aureus was also found in working environment, including packing vinyl, worker clothes, irrigation water and hands. The patterns of MLVA of isolates from perilla leaves matched with those of isolates from packing table, irrigation water, packing vinyl, and hands. The isolates were successfully examined and determined by MLVA, thus elucidating S. aureus source and spread.

Genotyping of Brucella abortus isolated from cattle in Gyeongbuk province by MLVA (MLVA를 이용한 경북지역 소에서 분리된 Brucella abortus의 유전형별)

  • Kim, Seong-Guk;Kim, Young-Hoan;Lee, Hong-Young;Choi, Jeong-Hye;Choi, Seong-Kyoon
    • Korean Journal of Veterinary Service
    • /
    • v.34 no.3
    • /
    • pp.227-234
    • /
    • 2011
  • Brucella (B.) abortus is a facultative intracellular pathogen that infects a wide variety of animal species and human. Brucellosis is the zoonosis and an extremely important disease around the world. Although the eight species can be differentiated by conventional phenotypic tests, these species display a high degree of DNA homology in DNA-DNA hybridization assay (>90%). Various methods have been established for genotyping of Brucella species, but most of analytical methods are lack reproducibility and limited capability to differentiate them. The attempt of this study was to evaluate multiple-locus VNTR analysis (MLVA) for use of epidemiological trace-back analysis in bovine brucellosis. Ninety-four B. abortus isolates from Gyeongbuk province during 2006~2010 were analyzed using 16 VNTR locus. High resolution automatic capillary electrophoresis system was used for more throughput, simpleer, faster, and better discriminable than conventional gel electrophoresis. As a result, 13 different genotypes were identified from 94 B. abortus isolates. MLVA could contribute to epidemiological trace-back analysis of bovine brucellosis.

A Genetic Comparison of Brucella abortus Isolates from Animals and Humans by Using the MLVA Assay

  • Her, Moon;Kang, Sung-Il;Kim, Jong-Wan;Kim, Ji-Yeon;Hwang, In-Yeong;Jung, Suk-Chan;Park, Sang-Hee;Park, Mi-Yeoun;Yoo, Han-Sang
    • Journal of Microbiology and Biotechnology
    • /
    • v.20 no.12
    • /
    • pp.1750-1755
    • /
    • 2010
  • The MLVA assay is known to have a high ability to identify and discriminate Brucella species, so that it can be used as an epidemiological tool to discriminate Brucella isolates originating from restricted geographic sources. In this study, the genetic profiles of 38 B. abortus isolates from humans were analyzed and compared with genotypes from animal isolates in South Korea. As a result, it was found that they did not show high genetic diversity and were compacted. They were clustered together with animal isolates, showing a significant correlation to regional distributions. With its ability to prove a significant genetic correlation among B. abortus isolates from animals and humans in South Korea, the MLVA assay could be utilized as part of a program to control and eradicate brucellosis, one of the major zoonoses. This study represents the first data of genetic correlation of B. abortus isolates from humans and animals in South Korea.

Investigation of occurrence factors on brucellosis-outbreak farm in Korea (소 브루셀라병 동시 다두 발생 농장의 발생 요인 조사)

  • Kim, Ji-Yeon;Kang, Shin-Seok;Her, Moon;Lee, Kichan;Sung, So-Ra;Gu, Jung-Hui;Kang, Sung-Il;Lee, Hyang-Keun;Kim, Yu-Jin;Kim, Dong-Gil;Jung, Suk-Chan
    • Korean Journal of Veterinary Service
    • /
    • v.35 no.4
    • /
    • pp.263-268
    • /
    • 2012
  • From the end of July 2012, several cases of abortion have been happened at the Korean indigenous cattle farm with 124 heads in Chungbuk province, Korea. Serological tests such as Rose-bengal test (RBT) and standard tube agglutination test (STAT) have been performed according to the standard official protocols of bovine brucellosis and 41 cattle turned out to be brucellosis-positive simultaneously. To find out the main factors of brucellosis outbreaks and spreads, additional serological, etiological and molecular investigation were applied. Totally, 11 B. abortus were isolated from 10 cattle's specimens including lymph-nodes and/or testis, and drinking water in cowhouse. In genotyping by multi-locus VNTR assay (MLVA) using 17 loci markers, the present B. abortus isolates were shown all the same pattern, D1 genotype, which has been reported in Gyeonggi and Gangwon province, Korea. These results suggest that the input of brucellosis might come from neighboring farms directly or indirectly, even if by unknown factor and expansion within farm would accelerate by materials related with aborting cows.

Strain-specific Detection of Bacillus Anthracis using Multiple-locus Variable-number Tandem Repeat Analysis (Multiple-locus Variable-number Tandem Repeat 분석을 사용한 Bacillus Anthracis 균주간 특이성 규명)

  • Jung, Kyoung-Hwa;Kim, Sang-Hoon;Kim, Seong-Joo;Kim, Ji-Cheon;Chai, Young-Gyu
    • Journal of the Korea Institute of Military Science and Technology
    • /
    • v.14 no.2
    • /
    • pp.305-312
    • /
    • 2011
  • Bacillus anthracis(Ba) is a Gram-positive spore-forming bacterium that causes the disease anthrax. The feature of Ba is the presence of two large virulence plasmids, pXO1 and pXO2. Molecular genotyping of Ba has been difficult to the lack of polymorphic DNA marker. Ba isolated from Korea has been genotyped using various nucleotide analysis methods, such as 16s rDNA sequencing and multiple-locus variable-number tandem repeat (MLVA) analysis. We identified genotypes that represent a genetic lineage in the B1 cluster. This study emphasized the need to perform molecular genotyping when attempting to verify a strain-specific Ba.

Serological and bacteriological study on canine brucellosis in the large kennel farms in Gyeongbuk province (경북지방 개 브루셀라병 다두 발생농장의 혈청학적 및 세균학적 조사)

  • Kim, Seong-Guk;Seo, Hee-Jin;Kim, Soon-Tae;Jang, Young-Sul;Jo, Min-Hee
    • Korean Journal of Veterinary Service
    • /
    • v.33 no.2
    • /
    • pp.129-134
    • /
    • 2010
  • Canine brucellosis is a contagious disease of the reproductive tract that cause mainly abortion and infertility in dog. A serological and bacteriological survey was conducted for breeding kennels which were suffered from frequent outbreak of canine brucellosis in Gyeongbuk province in 2009. Among 138 samples, 45 serum samples were sero-positive. Brucella canis was isolated from 30 blood samples of the seropositive cases, and from 2 samples of 62 sero-negatives. The biochemical properties of 32 isolates were characterized with no production of H2S, no fermentation of carbohydrates, hydrolyzation of urea, and development of thionin dye medium. At amplification of BCSP and 16S-rRNA gene using PCR, 711bp and 905bp DNA fragments were detected in agarose. Three tandem repeat pattern was shown in genotyping by Multi-locus VNTR assay (MLVA).