• Title/Summary/Keyword: L-diversity

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Frequency Diversity of BICM-OFDM with Extended Interleaving (확장된 인터리빙을 사용하는 BICM-OFDM의 주파수 다이버시티)

  • Choi, Min-Cheol;Kim, Chang-Joong;Lee, Ho-Kyoung
    • Journal of the Institute of Electronics Engineers of Korea TC
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    • v.47 no.7
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    • pp.102-108
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    • 2010
  • In this paper, we analyse the frequency diversity of BICM-OFDM with extended interleaving. The extended interleaving is an interleaving which is added to the existing BICM-OFDM system to extends the interleaving depth by times to the previous interleaving depth. Using the extended interleaving, the diversity order of the proposed system over -tap frequency selective channels is increased from min($d_{free}$, L) to min($d_{free}$, KL), where $d_{free}$ is minimum Hamming distance of the convolutional code. Simulation is also performed to show that the performance of the proposed system is better than that of the existing system even if the channel is an on-off channel in which the number of multi-paths is varying.

Identification of 26 Germplasms of Safflower (Carthamus tinctorius L.) with ISSR and SCAR Markers

  • Sung, Jung-Sook;Cho, Gyu-Taek;Lee, Suk-Young;Baek, Hyung-Jin;Park, So-Hye;Huh, Man-Kyu
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.55 no.4
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    • pp.319-326
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    • 2010
  • Safflower (Carthamus tinctorius L.) is a herb primarily distributed throughout in the world. We have used the inter-simple sequence repeats (ISSR) technique to investigate the phylogenetic relationships and genetic diversity of C. tinctorius. Of all germplasms, 88.7% were polymorphic among all germplasms. Mean genetic diversity within germplasms was very low (0.048). The Turkey germplasm had the highest expected diversity (0.082) and Australia germplasm was the lowest (0.020). These values indicate that most of the genetic diversity of safflower is found among germplasms and there is a high among-germplasm differentiation. We found eight phenetic bands for determining the specific marker of germplasm with SCAR markers. The regions of the Mediterranean Sea and India may be the most probable candidates for the origin of safflower. The tree showed four major clades: (1) European germplasms, (2) Azerbaijan, Egypt, and Ethiopia, (3) Australia, and (4) America.

Effects of Electrochemical Reduction Reactions on the Biodegradation of Recalcitrant Organic Compounds (ROCs) and Bacterial Community Diversity

  • Lee, Woo-Jin;Lee, Jong-Kwang;Chung, Jin-Wook;Cho, Yong-Ju;Park, Doo-Hyun
    • Journal of Microbiology and Biotechnology
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    • v.20 no.8
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    • pp.1230-1239
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    • 2010
  • Five bacterial species, capable of degrading the recalcitrant organic compounds (ROCs) diethyleneglycol monomethylether (DGMME), 1-amino-2-propanol (APOL), 1-methyl-2-pyrrolidinone (NMP), diethyleneglycol monoethylether (DGMEE), tetraethyleneglycol (TEG), and tetrahydrothiophene 1,1-dioxide (sulfolane), were isolated from an enrichment culture. Cupriavidus sp. catabolized $93.5{\pm}1.7$ mg/l of TEG, $99.3{\pm}1.2$ mg/l of DGMME, $96.1{\pm}1.6$ mg/l of APOL, and $99.5{\pm}0.5$ mg/l of NMP in 3 days. Acineobacter sp. catabolized 100 mg/l of DGMME, $99.9{\pm}0.1$ mg/l of NMP, and 100 mg/l of DGMEE in 3 days. Pseudomonas sp.3 catabolized $95.7{\pm}1.2$ mg/l of APOL and $99.8{\pm}0.3$ mg/l of NMP. Paracoccus sp. catabolized $98.3{\pm}0.6$ mg/l of DGMME and $98.3{\pm}1.0$ mg/l of DGMEE in 3 days. A maximum $43{\pm}2.0$ mg/l of sulfolane was catabolized by Paracoccus sp. in 3 days. When a mixed culture composed of the five bacterial species was applied to real wastewater containing DGMME, APOL, NMP, DGMEE, or TEG, 92~99% of each individual ROC was catabolized within 3 days. However, at least 9 days were required for the complete mineralization of sulfolane. Bacterial community diversity, analyzed on the basis of the TGGE pattern of 16S rDNA extracted from viable cells, was found to be significantly reduced in a conventional bioreactor after 6 days of incubation. However, biodiversity was maintained after 12 days of incubation in an electrochemical bioreactor. In conclusion, the electrochemical reduction reaction enhanced the diversity of the bacterial community and actively catabolized sulfolane.

New Evaluation on Maximum Ratio Diversity Reception for the Detection of Signals over Correlated Nakagami Fading Channels

  • Hong Wan-Pyo;Kim Chang-Hwan
    • Journal of information and communication convergence engineering
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    • v.2 no.3
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    • pp.145-148
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    • 2004
  • The performances of M-ary signals using L-branch maximum ratio combining (MRC) diversity reception in correlated Nakagami fading channels are derived theoretically. The coherent reception of M-ary differential phase shift keying (MDPSK), phase shift keying (MPSK), and quadrature amplitude modulation (MQAM) is considered. It is assumed that the fading parameters in each diversity branch are identical. The general formula for evaluating symbol error rate (SER) of M-ary signals in the independent branch diversity system is presented using the integral-form expressions.

Genetic Diversity and Phylogenetic Analysis of the Iranian Leishmania Parasites Based on HSP70 Gene PCR-RFLP and Sequence Analysis

  • Nemati, Sara;Fazaeli, Asghar;Hajjaran, Homa;Khamesipour, Ali;Anbaran, Mohsen Falahati;Bozorgomid, Arezoo;Zarei, Fatah
    • Parasites, Hosts and Diseases
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    • v.55 no.4
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    • pp.367-374
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    • 2017
  • Despite the broad distribution of leishmaniasis among Iranians and animals across the country, little is known about the genetic characteristics of the causative agents. Applying both HSP70 PCR-RFLP and sequence analyses, this study aimed to evaluate the genetic diversity and phylogenetic relationships among Leishmania spp. isolated from Iranian endemic foci and available reference strains. A total of 36 Leishmania isolates from almost all districts across the country were genetically analyzed for the HSP70 gene using both PCR-RFLP and sequence analysis. The original HSP70 gene sequences were aligned along with homologous Leishmania sequences retrieved from NCBI, and subjected to the phylogenetic analysis. Basic parameters of genetic diversity were also estimated. The HSP70 PCR-RFLP presented 3 different electrophoretic patterns, with no further intraspecific variation, corresponding to 3 Leishmania species available in the country, L. tropica, L. major, and L. infantum. Phylogenetic analyses presented 5 major clades, corresponding to 5 species complexes. Iranian lineages, including L. major, L. tropica, and L. infantum, were distributed among 3 complexes L. major, L. tropica, and L. donovani. However, within the L. major and L. donovani species complexes, the HSP70 phylogeny was not able to distinguish clearly between the L. major and L. turanica isolates, and between the L. infantum, L. donovani, and L. chagasi isolates, respectively. Our results indicated that both HSP70 PCR-RFLP and sequence analyses are medically applicable tools for identification of Leishmania species in Iranian patients. However, the reduced genetic diversity of the target gene makes it inevitable that its phylogeny only resolves the major groups, namely, the species complexes.

Performance Analysis of Wideband DS-CDMA System using Hybrid SC/$MRC-L_c$/L Diversity Received (하이브리드 SC/$MRC-L_c$/L 다이버시티 수신 광대역 DS-CDMA 시스템의 성능 해석)

  • 김영철;조성준
    • Proceedings of the Korean Institute of Information and Commucation Sciences Conference
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    • 2004.05b
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    • pp.489-493
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    • 2004
  • 본 논문에서는 다중경로 페이딩 환경에서의 하이브리드 (Hybrid) SC/MRC-L$_{c}$/L 다이버시티 수신기법과 콘볼루션 부호화 기법을 각각 이용할 때의 광대역 DS-CDMA 시스템의 성능을 구하였다. 다중경로 페이딩으로는 라이시안 페이딩 채널을 가정하였고, 다중사용자간섭의 영향을 함께 분석하였다. 그리고 하이브리드 SC/MRC-L$_{c}$/L 다이버시티 기법과 론볼루션 부호화 기법을 채용하여 성능개선정도를 비교, 분석하였다. 하이브리드 SC/MRC-L$_{c}$/L 수신에서는 각각의 반송파에 대하여 상관을 취하고 상관기 출력들 중에서 가장 큰 신호성분을 L$_{c}$개만큼 선택하여 최대비 합성하며, 콘볼루션 부호화는 다중경로 페이딩 및 다중접속간섭에 의하여 발생된 오류를 정정 및 검출한다. 분석 결과, 콘볼루션 부호화의 경우는 부호이득과 전력제한 시스템의 trade off를 고려한 부호화율의 선택과 하이브리드 SC/MRC-L$_{c}$/L 수신의 경우, 다이버시티 가지의 증가는 선택의 폭이 커져 성능개선은 이루어지지만 가지의 배수가 동일할 경우 가지의 수가 적은 것이 시스템의 복잡성과 경제적인 면에서 효율적임을 알 수 있었다

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Performance Analysis of MC-DS/CDMA System with Phase Error and Hybrid SC/MRC-(2/3) Diversity (위상 에러와 하이브리드 SC/MRC-(2/3)기법을 고려한 MC-DS/CDMA 시스템의 성능 분석)

  • Kim Won-Sub;Park Jin-Soo
    • The KIPS Transactions:PartC
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    • v.11C no.6 s.95
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    • pp.835-842
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    • 2004
  • In this paper, we have analyzed the MC-DS/CDMA system with input signal synchronized completely through adjustment of the gain in the PLL loop, by using the hybrid SC/MRC-(2/3) technique, which is said to one of the optimal diversity techniques under the multi-path fading environment, assuming that phase error is defined to the phase difference between the received signal from the multi-path and the reference signal in the PLL of the receiver. Also, assuming that the regarded radio channel model for the mobile communication is subject to the Nakagami-m fading channel, we have developed the expressions and performed the simulation under the consideration of various factor, in the MC/DS-CDMA system with the hybrid SC.MRC-(2/3) diversity method, such as the Nakagami fading index(m), $the\;number\;of\;paths\;(L_p),$ the number of hybrid SC.MRC-(2/3) $diversity\;branches\;(L,\;L_c),$ the number of users (K), the number of subcarriers (U), and the gain in the PLL loop. As a result of the simulation, it has been confirmed that the performance improvement of the system can be achieved by adjusting properly the PLL loop in order for the MC/DS-CDMA system with the hybrid SC/MRC-(2/3) diversity method to receive a fully synchronized signal. And the value of the gain in the PLL loop should exceed 7dB in order for the system to receive the signal with prefect synchronization, even though there might be a slight difference according to the values of the fading index and the spread processing gain of the subcarrier.

Genetic Diversity and Population Structure of maize, Zea mays, in Both Landraces and Cultivar Lines

  • Huh, Man-Kyu;Lee, In-Sup
    • Journal of Life Science
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    • v.12 no.1
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    • pp.27-32
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    • 2002
  • Enzyme electrophoresis was used to estimate genetic diversity and population structure of maize, Zea mays L. (Graminales) in Korea. In nine populations, fourteen of the 24 loci (58.3 %) showed detectable polymorphism. Genetic diversity (0.205) was higher than average values for species with similar life history traits. Although our data are relatively small and the landraces not direct ancestors of cultivar, apparently the domestication process has eroded the levels of genetic variation of maize. The recent cultivars were found to have fewer alleles per locus (1.42 vs. 1.56), fewer alleles per polymorphic locus (2.27 vs. 2.33), lower percent polymorphic locus (33.3% vs. 41.7%), and lower diversity (0.159 vs. 0.185) than landraces. These genetic diversity parameters indicated that the cultivar populations were genetically depauperate relative to landlaces. The GST value of nine populations was 0.239. Nearly 76% of the total genetic diversity in Zea mays was apportioned within populations. The indirect estimate of gene new based on mean GST was moderate (Nm=0.80).

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Genetic Diversity Analysis of Maintaining Lines for Kenyan Sunflower (Helianthus annus L.) Using Allele Specific SSR Markers

  • Mwangi, Esther W.;Lee, Myung-Chul;Sung, Jung Suk;Marzougui, Salem;Bwalya, Ernest C.
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2019.04a
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    • pp.61-61
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    • 2019
  • In any crop breeding program Selection and use of genetically diverse genotypes to develop cultivars with a broad genetic base is important. Molecular markers play a major role in selecting diverse genotypes. Molecular breeding programs of the crop can be made more efficient by use of molecular markers. The present study was done with an aim of analyzing genetic diversity and the population structure in 24 accessions of sunflower (Helianthus annus L.) from Kenya genetic diversity using 35 EST-SSR and gSSR primers.Out of the 35 markers 3 were not polymorphic as they indicated Polymorphic Information content( PIC) of value 0.00 and so the data analysis was done using 32 markers . The 32 set of markers used produced 29 alleles ranging from 2 to 7with a mean of 3.0 alleles per locus.The average value of polymorphic information contents(PIC) were 0.3 .Genetic diversity analysis using these markers revealed 3 major clusters. This result could be useful for designing strategies to make elite hybrid and inbreeding of crossing block for breeding and future molecular breeding programs to make elite variety.

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Phylogeography of Gloiopeltis furcata sensu lato (Gigartinales, Rhodophyta) provides the evidence of glacial refugia in Korea and Japan

  • Yang, Mi Yeon;Fujita, Daisuke;Kim, Myung Sook
    • ALGAE
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    • v.36 no.1
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    • pp.13-24
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    • 2021
  • The present-day genetic structure of macroalgal species reflects both geographical history and oceanic circulation patterns as well as anthropogenic introduction across native ranges. To precisely understand the genetic diversity and how the factors shape the current population structure of Gloiopeltis furcata sensu lato, we determined the mitochondrial 5' end of cytochrome c oxidase subunit I (COI-5P) sequences for 677 individuals sampled from 67 sites spanning almost the entire distribution range in Korea and Japan. Results from the phylogenetic analysis and haplotype distribution revealed eleven distinct lineages within G. furcata s.l. along the Korea-Japan coastal areas and displayed divergent phylogeographic patterns among lineages. Despite the closely related lineages distributed in same habitats as high rocky intertidal zone, they display different phylogeographic patterns among lineages. The populations from the south of Korea-Japan harbored the highest genetic diversity and unique endemism in comparison with other populations in the distribution range. This could be the evidence of southern refugia for G. furcata s.l. in the Northwest (NW) Pacific and the recent migration from native to introduced region. The reason is that an exceptional distribution pattern was found high genetic diversity in Hakodate of Japan where is the northern location in the NW Pacific. Our results imply the contemporary influence on the distribution due to current circulation pattern and anthropogenic effects. These phylogeographic findings provide the important insight into cryptic species diversity and the detailed distribution pattern of Gloiopeltis in the NW Pacific.