• ALGAE
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• v.28 no.4
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• pp.307-330
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• 2013

The genus Cryptomonas is easily recognized by having two flagella, green brownish color, and a swaying behavior. They have relatively simple morphology, and limited diagnostic characters, which present a major difficulty in differentiating between species of the genus. To understand species delineation and phylogenetic relationships among Cryptomonas species, the nuclear-encoded internal transcribed spacer 2 (ITS2), partial large subunit (LSU) and small subunit ribosomal DNA (rDNA), and chloroplast-encoded psbA and LSU rDNA sequences were determined and used for phylogenetic analyses, using Bayesian and maximum likelihood methods. In addition, nuclear-encoded ITS2 sequences were predicted to secondary structures, and were used to determine nine species and four unidentified species from 47 strains. Sequences of helix I, II, and IIIb in ITS2 secondary structure were very useful for the identification of Cryptomonas species. However, the helix IV was the most variable region across species in alignment. The phylogenetic tree showed that fourteen species were monophyletic. However, some strains of C. obovata had chloroplasts with pyrenoid while others were without pyrenoid, which used as a key character in few species. Therefore, classification systems depending solely on morphological characters are inadequate, and require the use of molecular data.

• Proceedings of the Korea Water Resources Association Conference
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• 2006.05a
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• pp.1333-1337
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• 2006

표층수를 주요 취수원으로 활용하는 우리나라의 경우 저수지 내 남조류 대발생시 주로 인공순환에 의한 제어방안을 적용하고 있다. 본 연구에서는 간헐식 폭기장치를 사용중에 있는 H호를 대상으로 식물플랑크톤 제어 효과를 평가하고, 이에 따른 식물플랑크톤의 수직적 분포와 선택 취수와의 연관성을 규명하여 정수장 유입 원수의 수질을 향상하고자 하였다. 2005년 H호의 남조류 농도는 최대 $1.2mg/m^3 $ 수준으로 낮은 분포로 조사되었다. 남조강에 대한 폭기 효과는 6월에는 워낙 그 농도가 낮아 효과 분석 자체가 무의미 하였으나, 10월에는 비영향지점 보다 영향지점의 최대 농도가 약 28% 저감되는 효과를 확인하였다. 조사 기간 중 가장 높은 농도를 보인 조류강은 Cryptophyta이었으며 6월9일에 약 $5mg/m^3$ 농도로 측정되었다. 10월6일에는 Diatom, Bluegreen, Green algae, Cryptophyta가 비슷한 농도 분포로 혼재된 양상을 보였다. 다른 조류강의 경우 조사 기간 중 $3mg/m^3$ 이하의 농도로 측정되었다. 취수탑을 중심으로 설치하여 운영하는 간헐식 폭기장치 1기의 유효 영향 범위를 조사하기 위하여 폭기 영향권에서 식물플랑크톤 분포를 submersible fluorescence probe로 현장에서 실시간으로 조사한 결과 식물플랑크톤 밀도는 감소하고 수직적인 분포층은 깊어지는 현상을 보였다. 이러한 효과를 보이는 거리는 폭기 장치로부터 약 50m로 나타났으며 pH, DO, 수온항목의 결과에서도 같은 현상을 보였다. 이 결과에 따르면 현재 설치된 총 7기의 폭기 장치의 유효영향 범위는 최대 $0.07km^2$ 면적에 그 효과를 기대할 수 있을 것으로 판단되어, 남조 수화현상이 심화될 경우 인공순환에 의한 저감효과가 크지는 않을 것으로 예측된다. 조사 기간중 H호의 현존 식물플랑크톤량의 $60%{\sim}87%$가 수심 10m 이내에 분포하였고, 녹조강과 남조강이 우점하는 하절기에는 5m 이내에 주로 분포하였다. 취수탑 지점의 수심이 연중 $25{\sim}35m$를 유지하는 H호의 경우 간헐식 폭기장치를 가동하는 기간은 물론 그 외 기간에도 취수구의 심도를 표층 10m 이하로 유지 할 경우 전체 조류 유입량을 60% 이상 저감할 수 있을 것으로 조사되었다.

• Journal of Ecology and Environment
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• v.42 no.4
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• pp.240-258
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• 2018

Background: Several investigations carried out from large brackish lagoons in South Korea. However, no studies have yet examined phytoplankton in lagoons that changed to freshwater, such as Cheonjin Lake. The present study examined the algae from Cheonjin Lake. Methods: Samples were collected at monthly inetrvals from May 2017 to April 2018, from the surface layer using a plankton net (mesh size $20{\mu}m$), and sequeezing submerged macrophytes. Microscopic examinations were conducted at a magnification of 200 to 1000x using a Zeiss microscope (Axio Imager. A2), and photographs were taken with an AxioCam HRC camera. Silica-scaled samples of Chrysophyta for SEM were placed on coverglass, air dried, coated with gold, and then examined with a Hitachi SV8220 SEM. Results: A total of 376 taxa from six major algal groups (Chlorophyta, Chrysophyta, Euglenophyta, Cyanophyta, Dinophyta, and Cryptophyta) were identified. Among these algae, 28 taxa of desmids, 9 taxa of Euglenophyceae, 4 taxa of Chlorophyceae, 2 taxa of Chrysophyceae, and 1 taxon of Xanthophyceae are reported for the first time in Korea. A new species, Cosmarium hexagonum sp. nov was described. The phytoplankton communities were characterized by an abundance of Desmids (within Charophyceae) accounted for 148 taxa from 22 genera. Species richness were particularly high in the Autumn. Conclusion: In this study, a total 376 taxa of 148 desmids (Charophyceae), Chlorophyceae (103 taxa), Chrysophyceae (53 taxa), Euglenophyta (49 taxa), Dinophyta (8 taxa), and Cryptophyta (2 taxa) were identified from Cheonjin Lake. Twenty-eight taxa of desmids including a new species (Cosmarium hexagonum sp. nov.), 9 taxa of Euglenophyceae, 4 taxa of Chlorophyceae, 2 taxa of Chrysophyceae, and 1 taxon of Xanthophyceae were newly recorded in Korea.

• Korean Journal of Environmental Biology
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• v.40 no.1
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• pp.112-123
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• 2022

To assess the influence of environmental factors on the phytoplankton community structure and total phytoplankton biomass during four seasons in 2014, we investigated the abiotic and biotic factors at 25 stations in the Busan coastal region. The phytoplankton community and total phytoplankton biomass were strongly dependent on the discharge from the Nakdong River, and the high density of phytoplankton was related with the introduction of the Tsushima Warm Current (TWC), particularly in the thermohaline fronts of the fall season. The relationship between the salinity and nutrient (Dissolved inorganic nitrogen=DIN: R²=0.72, p<0.001 and Dissolved inorganic silicon=DSi: R²=0.78, p<0.001) highly correlated with the river discharge, implying that those nutrients have played a crucial role in the growth of diatom and cryptophyta. The total phytoplankton biomass was highest in the summer followed by autumn, spring, and winter. Diatom and cryptophyta species were dominant species during the four seasons. Additionally, there were strong positive correlations between Chlorophyll a and total phytoplankton biomass (R²=0.84, p<0.001), cryptophyta (R²=0.76, p<0.001) and diatom (R²=0.50, p<0.001), respectively. In particular, we found that there were significant differences in the nutrients, phytoplankton community compositions, and total phytoplankton biomass between the inner and the outer coastal region of Busan, depending on the amount of river discharge from the Nakdong River, particularly during rainy seasons. Therefore, the seasonal change of TWC and river discharge from the Nakdong River serve an important role in determining phytoplankton population dynamics in the Busan coastal region.

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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• v.17 no.3
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• pp.160-180
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• 2012

We have studied the eukaryotic plankton species diversity to compare the community structure of fresh and brackish waters in the lower reaches of the Nakdong River using metagenomic methods. We constructed 18S rDNA clone libraries of total DNAs extracted from environmental water samples collected at Mulgeum (MG100929, fresh) and Eulsukdo bridge (ES, brackish). Through the steps of colony PCR, PCR-RFLP, sequencing and similarity analysis, we discovered the diverse species composition of eukaryotic plankton. Total 338 clones (170 at MG100929 and 168 at ES) were analyzed, and then we found 74 phylotypes (49 for MG100929 and 25 for ES). From the phylogenetic analysis, we confirmed various eukaryotic plankton of broad range of taxonomic groups, including Stramenopiles, Cryptophyta, Viridiplantae, Alveolata, Rhizaria, Metazoa, and Fungi. We also found several unreported species in Korea and candidates of new taxonomic entities at levels higher than genus. Especially, the cryptic species diversity including unreported phylotypes of Pirsonia (Stramenopiles) and Perkinsea (Alveolata) suggests that the molecular monitoring method can produce new informative biological data in monitoring the changes in the Nakdong River Mouth ecosystem.

• Korean Journal of Environmental Biology
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• v.38 no.2
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• pp.278-288
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• 2020

Rhodomonas salina is a phototrophic marine flagellate. We examined the ultrastructure of R. salina with particular attention to the flagellar apparatus by transmission electron microscopy and compared it with that of other cryptomonads reported previously. The major components of the flagellar apparatus in R. salina were a keeled rhizostyle (Rhs), a striated fibrous root(SR), a SR-associated microtubular root (SRm), a mitochondrion-associated lamella (ML), and three types of microtubular roots (9r, 4r, and 2r). The keeled Rhs originated near the proximal end of the dorsal basal body, passed near the nucleus and dissociated at the posterior end of the cell. The SR and SRm originated between two basal bodies and laterally extended to the right side of the cell. The ML originated between two basal bodies and extended to the left side of the cell. The 9r originated between the ventral basal body and the Rhs and extended toward the anterior dorsal lobe of the cell. The 4r originated near the 9r and extended toward the dorsal lobe with the 2r, which originated between two basal bodies. Here, the flagellar apparatus in R. salina is described, and the ultrastructure of the flagellar apparatus is compared among cryptomonad species.

• Animal cells and systems
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• v.5 no.2
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• pp.117-126
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• 2001

Occurence, seasonal changes and vertical distribution of the silica-scaled chrysophytes in a small fish-free pond were studied using electron microscopy (EM) and light microscopy (LM) from October 1998 to July 1999. The phytoplankton community was characterized by Chrysophyta and Cryptophyta. Ten species of the silica-scaled chrysophytes of genera Mallomonas, Synura, Chrysosphaerella and Spiniferomonas were identified by EM, and the most abundant species were Mallomonas akrokomos and M. portae-ferreae. The maximum population density of M. akrokomos was observed in December and several peaks appeared periodically at about one to two month intervals, whereas M. portae-ferreae developed the maximum density in March. The diurnal vertical distribution of M. akrokomos exhibited clear downward migration at night and slightly upward migration in the morning. A complex interaction among physico-chemical and biological factors seemed to affect the vertical distribution of M. akrokomos. However, the seasonal changes of M. akrokomos did not show significant corre1ations with the physico-chemical and some biologica1 factors. Although M. akrokomos was evenly distributed throughout the water column during some experimental periods, the diurnal patterns found in the two diurnal cycles showed consistency in that it clearly avoided the surface water during the day. This suggested that M. akrokomos may be a shade plankton with maximum densities below surface layer.

• ALGAE
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• v.28 no.4
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• pp.331-341
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• 2013

Rhinomonas reticulata var. atrorosea G. Novarino is a photosynthetic marine flagellate that is known to have typical characteristics of cryptomonads. We examined the flagellar apparatus of R. reticulata var. atrorosea by transmission electron microscopy. The major components of the flagellar apparatus of R. reticulata var. atrorosea consisted of four types of microtubular roots (1r, 2r, 3r, and mr), a non-keeled rhizostyle (Rhs), mitochondrion-associated lamella (ML), two connections between basal bodies, a striated fibrous root (SR) and a striated fiber-associated microtubular root (SRm). Four types of microtubular roots originated near the ventral basal body and extended toward the left side of the basal bodies. The non-keeled Rhs originated at the Rhs-associated striated fiber, which was located between two basal bodies and extended into the middle of the cell. The ML was a plate-like fibrous structure associated with mitochondria and originating from a Rhs-associated fiber. It split into two parts and extended toward the dorsal-posterior of the cell to a mitochondrion. The SR and SRm extended parallel to the anterior lobe of the cell. The overall configuration of the flagellar apparatus in R. reticulata var. atrorosea was similar to the previously reported descriptions of those of Cryptomonas paramecium, C. pyrenoidifera, C. ovata, Hanusia phi, Guillardia theta, and Proteomonas sulcata. However, the flagellar apparatus system of R. reticulata var. atrorosea was more complex than those of other cryptomonad species due to the presence of an additional microtubular root and other distinctive features, such as a rhizostyle-associated striated fiber and large ML.

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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• v.21 no.1
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• pp.24-35
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• 2016

To assess the relationship between environmental factors and seasonal phytoplankton community structure, we investigated abiotic and biotic factors in Ulsan Bay, Korea. We divided the bay into two areas based on geographical characteristics and compared the difference in each factor between inner and outer bay with t-test statistics. As a result, temperature in the outer bay was higher than that of the inner bay during winter (t = -5.833, p < 0.01) and autumn (p > 0.05). However, opposite trend was observed during spring (t = 4.247, p < 0.01) and summer (t = 2.876, p < 0.05). Salinity was significantly lower in the inner bay than in the outer bay in winter, spring, and summer (p < 0.01). However, the salinity was not significantly different between the inner and the outer bay in the autumn (p > 0.05). In particular, high nutrient concentration was observed in most stations during winter season due to vertical well mixing. The nutrient concentration was significantly higher in surface layers of inner bay after rainfall, particularly in the summer. The relative contribution (approximately 70%) of < $20{\mu}m$ (nano and pico) size phytoplankton was increased in all seasons with continuously low nutrients from the offshore water due to their adaption to low nutrient without other large competitors. Interestingly, high population of Eutreptiella gymnastica was kept in the inner bay during the spring and summer associated with high DIN (nitrate+nitrite, ammonium) after river discharge following rainfall, suggesting that DIN supply might have triggered the increase of Eutreptiella gymnastica population. In addition, high density of freshwater species Oscillatoria sp. and Microcystis sp. were found in several stations of the inner bay that were provided with large amounts of freshwater from the Tae-wha River. Diatom and cryptophyta species were found to be dominant species in the autumn and winter. Of these, centric diatom Chaetoceros genus was occupied in the outer bay in the autumn. Cryptophyta species known as opportunistic micro-algae were found to have high biomass without competitors in the inner bay. Our results demonstrated that Ulsan Bay was strongly affected by freshwater from Tae-wha River during the rainy season and by the surface warm water current from the offshore of the bay during dry season. These two external factors might play important roles in regulating the seasonal phytoplankton community structures.

• Korean Journal of Ecology and Environment
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• v.54 no.4
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• pp.303-314
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• 2021

To understand how to efficiently observe the biomass and community of phytoplankton, phytoplankton sampling was carried out from June to October 2019 at the Yeongju dam sediment control reservoir(YJ) and Bohyeonsan dam reservoir(BH1 and BH2). The results derived from microscopic observation, such as the conventional phytoplankton qualitative/quantitative analysis, and from the CHEMTAX method based on the pigments, were compared. The relative contribution of phytoplankton, calculated by the microscopy and CHEMTAX methods, showed a significant difference in all four classes: cryptophyta, chlorophyta, cyanobacteria, and diatoms. In addition, the correlation between the two observation methods was poor. This might be caused by methodological differences in microscopy that do not consider the varying cell sizes among phytoplankton species. In this study, by converting the cells into carbon, the slope between both carbon biomasses based on microscopy and CHEMTAX was improved close to the 1 : 1 line, and the y-intercept was closer to 0 for cryptophyta and diatoms. For cyanobacteria, the slope increased, the y-intercept decreased, and the plot approached 1 : 1 although the correlation coefficients were not improved in all classes. The present study suggests that application of CHEMTAX based on pigment analysis could be a possible approach to efficiently determine the relative carbon proportions of individual classes of phytoplankton community composition.