• Korean Journal of Microbiology
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• v.28 no.4
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• pp.324-330
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• 1990

The distribution of physicochemical environmental factors and microbiological factors was studied at 6 sampling sites in Kyeongge Bay of Yellow Sea from October 1989 to October 1990. The total bacterial number, saprophytic bacterial number, petroleum-degrading bacterial number, bacterial biomass, and bacterial secondary production were measured in the range of 0.09~1.24*10$^{7}$ cells/ml, 7~60000 CFUs/ml, 0~240 cells/ml, 14.16~301 .$\mu$g-C/l, and 0.13~11.82 mg-C/m$^{3}$/hr, respectively. The turnover times of $^{3}$H-glucose and $^{3}$H-acetate were in range of 6.5~6984 and 41~24897 hours, respectively. The spatial distribution of heterotrophic bacterial communities were hightly affected by influx of organic pollutants from the coastal area and the seawater exchange with offshore.

• Journal of Microbiology and Biotechnology
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• v.23 no.5
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• pp.602-613
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• 2013

This paper aims at an investigation of the features of bacterial communities in surface sediments of the South China Sea (SCS). In particular, biogeographical distribution patterns and the phylogenetic diversity of bacteria found in sediments collected from a coral reef platform, a continental slope, and a deep-sea basin were determined. Bacterial diversity was measured by an observation of 16S rRNA genes, and 18 phylogenetic groups were identified in the bacterial clone library. Planctomycetes, Deltaproteobacteria, candidate division OP11, and Alphaproteobacteria made up the majority of the bacteria in the samples, with their mean bacterial clones being 16%, 15%, 12%, and 9%, respectively. By comparison, the bacterial communities found in the SCS surface sediments were significantly different from other previously observed deep-sea bacterial communities. This research also emphasizes the fact that geographical factors have an impact on the biogeographical distribution patterns of bacterial communities. For instance, canonical correspondence analyses illustrated that the percentage of sand weight and water depth are important factors affecting the bacterial community composition. Therefore, this study highlights the importance of adequately determining the relationship between geographical factors and the distribution of bacteria in the world's seas and oceans.

• 한국해양학회지
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• v.27 no.2
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• pp.154-163
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• 1992

Bacterial abundance, production, and environmental parameters were investigated three times to study distribution of bacterial variables and to examine how estuarine mixing would influence the distribution of bacterial variables in the euphotic zone of the estuarine system of the Mankyung river and Dongjin river during a period of October, 1990-August, 1991. Although a limited number of investigations were made, bacterial abundance and production showed large variations from 0.4 to 5.8${\times}$10/SUP 9/ 1/SUP -1/ and from 0.1 to 22.2 ug C 1/SUP -1/ d/SUP -1/, respectively. The wide ranges of bacterial variables indicated very dynamic changes in conditions of bacterial growth in the estuary. Interestingly, bacterial abundance substantially increased with depth in most stations f shallow depth. but bacterial production remarkably decreased with depth. We propose that the observed distribution of bacterial abundance and production would be explained by estuarine mixing in the estuary. Analyses of mixing diagrams showed that estuarine mixing would mix conservatively bacteria and bacterial production. Further, estuarine mixing often seemed to cause an increase in bacterial abundance and reduction of bacterial production presumably due to resuspension of sediment. This suggests that roles of estuarine mixing would be significant in the distribution of bacterial abundance and production, and thus in biogeochemical cycles in the estuary.

• Journal of Wetlands Research
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• v.7 no.2
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• pp.37-52
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• 2005

Vertical distribution of bacterial population and activities were compared between the muddy and sandy sediment of the tidal flat located in southern area of Ganghwa Island. The average of bacterial number and activities in mud flat was slightly higher than that in sand flat. Bacterial number was markedly increased at the sandflat during the investigation period, which seemed to be the result of increase of mud content. The number and activities of microorganisms in mudflat was comparable to that of the mangrove sediments. There was no differences in bacterial number with the depth, but the aminopeptidase activity and bacterial productivity were decreased markedly within 3~5cm depth of sediment due to the availability of carbon sources and molecular oxygen in pore water. The number and activities of microorganisms in mudflat did not correlated with the distribution of benthic microalgae; however, those in sand flat were closely correlated with the distribution of benthic microalgae. The distribution of marsh plant in the mudflat area might be the reason of the difference.

• Ocean and Polar Research
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• v.30 no.4
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• pp.509-518
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• 2008

Distribution of bacterial abundance and production was investigated in seawater around Saemangeum dike 7 times during March, $2007{\sim}July$, 2008. In the inner area of the dike, salinity variation was great due to river runoff from Mangyung and Dongjin Rivers and high chlorophyll a (chl a) concentrations up to $124.3{\mu}g\;l^{-1}$ was found. In the outer area of the dike, salinity was higher than in the inner area of the dike, and chl a was lower up to 10 times than in the inner area of the dike. Thus, the area of Saemangeum showed meso- to hypereutrophic conditions. Bacterial abundance and production ranged from 0.3 to $4.3{\times}10^9\;cells\;l^{-1}$ and from 5.2 to $570 pmol\;l^{-1}h^{-1}$ in outer area of the dike, respectively, while in the inner area of the dike bacterial abundance and production was 3 to 4 times higher ($0.4{\sim}12.7{\times}10^9\;cells\;l^{-1}$ and $12.3{\sim}1309\;pmol\;l^{-1}h^{-1}$, respectively) than those in the outer area. In both areas, bacterial abudance and production was highest in summer and lowest in winter. However, the variations of bacterial parameters was very large in each season. These large variations seemed to be related with the supply of organic matter. Bacterial abundance and production showed significant negative correlations with salinity in the inner area, suggesting that allochthonous organic matter input by river runoff could be an important factor in regulating the distribution of bacterial abundance and production. In addition, bacterial production also correlated positively with chl a in the inner area, suggesting that autochthonous substrate might be another regulating factor of bacterial growth in the area. These results suggest that the supply of both allochthonous organic substrates introduced by river runoff and autochthonous substrates produced by phytoplankon could be important in regulating bacterial growth and utilization of organic matter in the area. Thus, to manage water quality in the inner area of dike, it seems to be important to lower the load of both organic and inorganic nutrients from adjacent rivers.

• Korean Journal of Microbiology
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• v.27 no.2
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• pp.130-138
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• 1989

Microbiological parameters such as bacterial biovolume and biomass in Soyang Reservoir was statistically analyzed with the physico-chemical enviromental factors. Analysis of correlation and multiple regression showed that temperature affects most of microbiological parameters. Variations of total bacterial number, total bacterial biovolume and saprophyte number were highly correlatd with the concentrations of chlorophyll a and pheophytin a. Bacterial production by the $^{3}H$-thymidine incorporation rate was largely affected by Seston. It suggests that microbiological factors such as bacterial biovolume and bacterial biomass were controled by the concentration of seston and distribution of phytoplankton which acts as carbon and energy source for the bacterial community in the water column of Soyang Reservoir.

• The Plant Pathology Journal
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• v.26 no.3
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• pp.238-244
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• 2010

Spatial and temporal distribution of Bacillus licheniformis N1 was investigated over time on the leaves, petioles and crowns of the strawberry plants. Bacterial population on the strawberry plants was quantified over time by selective plating. Bacterial population of N1 containing a plasmid pWH43G carrying green fluorescent protein (GFP) declined relatively faster on the plant surface as compared to the Strain N1 itself. However, this result was found to be enough to utilize the strain to visualize bacterial colonization on the plant surface. When B. licheniformis N1 was treated together with Silwet L-77 at 0.03%, the bacterial population on plant surface persisted for up to 7 days. B. licheniformis N1 (pWH43G) containing Silwet L-77 was applied on the strawberry plants and the GFP expressing bacteria were visualized by confocal laser scanning microscopy. Bacterial persistence was also investigated in a growth chamber and in a plastic house after N1 bioformulation treatment on the strawberry plant. The Strain N1 colonized three different tissues well and persisted over 3 to 5 days on the strawberry plants. They formed bacterial aggregates on plant surfaces for at least 3 days, resulting in a biofilm to resist fluctuating plant surface environment. However, the bacterial persistence dramatically declined after 7 days in all tested tissues in a plastic house. This study suggest that B. licheniformis N1 colonizes the strawberry plant surface and persists for a long time in a controlled growth chamber, while it can not persist over 7 days on the plant surface in a plastic house.

• Journal of Microbiology
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• v.34 no.4
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• pp.300-304
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• 1996

To define the effects of zooplankton and phytoplankton to bacteria, bacterial numbers, frequency of dividing cells (FDC) and size distribution were performed with image analysis in the surface layer of Lake Soyang. In August 1992, when Anabaena was blooming, the bacterial number increased at daytime. Bacterial numbers and FDC value had a negative correlation (r = 0.83, P < 0.01). Bacterial size spectrums were dynamically changed during the day and night, especially the small bacteria less than $0.5\;{\mu}m^3$. Meanwhile, in October, after the bloom, the bacterial number was only one third of that in August, even though the FDC was higher than that in August. The bacterial numbers of small size class dropped at 13:00. But the size spectrums were relatively constant during the night time. These results suggest that the bacterial growth was tightly coupled with phytoplankton during Anabaena bloom. And after the bloom, the bacterial number was controlled grazing activity of zooplankton at daytime.

• Biomedical Science Letters
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• v.22 no.4
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• pp.150-159
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• 2016

Knowledge of the distribution and biodiversity of environmental bacteria and the ecosystem that influences them is crucial for predicting an ecosystem. However, bacterial culture methods can only analyze approximately 0.1% of the existing microorganisms, those that are readily cultured under laboratory conditions. By contrast, next-generation sequencing (NGS) has generally been known to obtain more diverse profiling of bacterial composition. We compared the bacterial communities using both a culture-dependent (MALDI-TOF) and culture-independent (NGS) methods. Environmental specimens were obtained from both freshwater and seawater. Water samples were also analyzed by both pyrosequencing and MiSeq sequencing, in order to select one NGS platform which could analyze comparatively more diverse microbiota. Bacterial distribution analyzed with MALDI-TOF showed no difference between the microbiota of freshwater and seawater, whereas the results analyzed with NGS distinguished between the two. The diversity indexes of MiSeq sequencing were higher than for Pyrosequencing. This indicated that MiSeq sequencing is capable of analyzing a comparatively wider diversity of bacteria. The genus of Flavobacterium and Planktophila were identified as being unique to freshwater, whereas EU801223 and OM43 were found in the seawater. Difference between the bacterial composition of the freshwater and seawater environments was identified by MiSeq sequencing analysis.

• Fisheries and Aquatic Sciences
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• v.22 no.7
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• pp.14.1-14.8
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• 2019

Olive flounder (Paralichthys olivaceus) is the major species developed for aquaculture in South Korea. Over the long history of olive flounder aquaculture, complex and diverse diseases have been a major problem, negatively impacting industrial production. Vibriosis is a prolific disease which continuously damages olive flounder aquaculture. A bacterial disease survey was performed from January to June 2017 on 20 olive flounder farms on Jeju Island. A total of 1710 fish were sampled, and bacteria from the external and internal organs of 560 fish were collected. Bacterial strains were identified using 16 s rRNA sequencing. Twenty-seven species and 184 strains of Vibrio were isolated during this survey, and phylogenetic analysis was performed. Bacterial isolates were investigated for the distribution of pathogenic and non-pathogenic species, as well as bacterial presence in tested organs was characterized. V. gigantis and V. scophthalmi were the dominant non-pathogenic and pathogenic strains isolated during this survey, respectively. This study provides data on specific Vibrio spp. isolated from cultured olive flounder in an effort to provide direction for future research and inform aquaculture management practices.