This study aims at a proposal of the plan that can improve raw water quality by an experimental study using influent water of Nak-dong river, which has been used as raw water for drinking in U-city, through the establishment of the submerged biofilter process PILOT PLANT of media packing channel method. From the analysis of removal efficiency for each water quality item of the collected sample, following results are obtained. First of all, the removal rate of suspended material, BOD, COD, T-N, TOC, turbidity, and $NH_3$ -N appear 82%, 78%, 42%, 15%, 57%, 43%, 54%, and 55% respectively and it is known that the submerged biofilter process of media packing channel method takes effects on water quality improvement from the above analysis results of water treatment efficiency. And the analyzed results for water temperature, residence time, and activities of microorganism, which can be the factors affect on water quality improvement, are as follows. 1) The removal rate variation of SS, BOD, and COD attendant on water temperature change is examined and it is known that the removal rate increases at $13^{\circ}C$ or above. 2) The removal rate of SS, BOD, and COD attendant on residence time is most active in the range of 0~18hr, 0~1.8hr, 0~2.7hr respectively, so it is found that the removal rate becomes smaller after 2.7hr. 3) From the examination of microorganism activity with the abundance of normal bacteria, it is found that the floating bacteria decrease as the flow distance from raw water inflow point of PILOT PLANT increases, and the adhesive bacteria have no concern with the flow distance. And it its known that the biomass of fine algae decreases as the flow distance from the raw water inflow point of PILOT PLANT increases from the examination with Chl-a.