• Title/Summary/Keyword: stem surface

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Sequence Dependent Binding Modes of the ΔΔ- and ΛΛ-binuclear Ru(II) Complexes to poly[d(G-C)2] and poly[d(A-T)2]

  • Chitrapriya, Nataraj;Kim, Raeyeong;Jang, Yoon Jung;Cho, Dae Won;Han, Sung Wook;Kim, Seog K.
    • Bulletin of the Korean Chemical Society
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    • v.34 no.7
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    • pp.2117-2124
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    • 2013
  • The binding properties and sequence selectivities of ${\Delta}{\Delta}$- and ${\Lambda}{\Lambda}-[{\mu}-Ru_2(phen)_4(bip)]^{4+}$ (bip = 4,4'-biphenylene (imidazo [4,4-f][1,10]phenanthroline) complexes with $poly[d(A-T)_2]$ and $poly[d(G-C)_2]$ were investigated using conventional spectroscopic methods. When bound to $poly[d(A-T)_2]$, a large positive circular dichroism (CD) spectrum was induced in absorption region of the bridging moiety for both the ${\Delta}{\Delta}$- and ${\Lambda}{\Lambda}-[{\mu}-Ru_2(phen)_4(bip)]^{4+}$ complexes, which suggested that the bridging moiety sits in the minor groove of the polynucleotide. As luminescence intensity increased, decay times became longer and complexes were well-protected from the negatively charged iodide quencher compared to that in the absence of $poly[d(A-T)_2]$. These luminescence measurements indicated that Ru(II) enantiomers were in a less polar environment compared to that in water and supported by minor groove binding. An angle of $45^{\circ}$ between the molecular plane of the bridging moiety of the ${\Delta}{\Delta}-[{\mu}-Ru_2(phen)_4(bip)]^{4+}$ complex and the local DNA helix axis calculated from reduced linear dichroism ($LD^r$) spectrum further supported the minor groove binding mode. In the case of ${\Lambda}{\Lambda}-[{\mu}-Ru_2(phen)_4(bip)]^{4+}$ complex, this angle was $55^{\circ}$, suggesting a tilt of DNA stem near the binding site and bridging moiety sit in the minor groove of the $poly[d(A-T)_2]$. In contrast, neither ${\Delta}{\Delta}$-nor ${\Lambda}{\Lambda}-[{\mu}-Ru_2(phen)_4(bip)]^{4+}$ complex produced significant CD or $LD^r$ signal in the absorption region of the bridging moiety. Luminescence measurements revealed that both the ${\Delta}{\Delta}$- and ${\Lambda}{\Lambda}-[{\mu}-Ru_2(phen)_4(bip)]^{4+}$ complexes were partially accessible to the $I^-$ quencher. Furthermore, decay times became shorter when bis-Ru(II) complexes bound to $poly[d(G-C)_2]$. These observations suggest that both the ${\Delta}{\Delta}$- and ${\Lambda}{\Lambda}-[{\mu}-Ru_2(phen)_4(bip)]^{4+}$ complexes bind at the surface of $poly[d(G-C)_2]$, probably electrostatically to phosphate group. The results indicate that ${\Delta}{\Delta}$- and ${\Lambda}{\Lambda}-[{\mu}-Ru_2(phen)_4(bip)]^{4+}$ are able to discriminate between AT and GC base pairs.

Germinability, Morphological Development during Germination and Anatomical Observation Gentiana scabra Bunge var. buergeri Max. (자생 용담의 발아성 및 발아과정 중의 형태 형성과 조직의 해부학적 관찰)

  • Son, Byung-Gu;Choi, Young-Hwan;An, Jong-Gil;Cho, Dong;Kang, Jum-Soon;Jung, Yong-Mo;Kwon, Oh-Chang
    • Journal of Life Science
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    • v.9 no.2
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    • pp.127-135
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    • 1999
  • Gentiana scabra Bunge var buergeri Max, can be widely used such as cut-flower, ornamental and medicinal plant among the native plants. Microscopic and Scanning electron microscopic observation plant were carried out to estimates the characteristics correlated with germinability and germination process, and the results were as follows. The seeds were germinated just after harvest, and it means that there is no or little dormancy of the seeds. Matured seeds showed higher germinability than those of immatured. As the storage period was longer, immatured seeds showed shorter longevity than those of matured. The average longevity was about 190 days. According to the observation results of morphological changes during the germination, seed coat was expanded with water absorption immediately after seeding, and radicals were observed 2 days after seeding. Root hairs were formed behind the growing tip of the root on 4 days after seeding and cotyledon were unfolded on 6 days after seeding. In the microscopic observation of leaf tissues, it could be easily distinguished between midrib, and leaf blade, and also observed upper epidermis, palisade parenchyma and spongy parenchyma consisted as a sing1e layer. Palisade parenchyma was consisted of a single layer of cell. Stomata were restricted lower surface, arranged as anamocytic type, and surrounded by guard cells. In the microscopic anatomy of stem were consisted of cortical layer, forming a single layer of epidermis and parenchyma, and vascular bundle which was consisted of continuous cylinder of vascular tissues.

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Effects of Temperature and Light Intensity on the Growth of Red Pepper(Capsicum annuum L.) in Plastic House During Winter. IV. Growth Responses Influenced by Temperatures and Light Intensities in Growth Chamber (동계 plastic house내 고추(Capsicum annuum L.) 육묘시 온도와 광도가 생장에 미치는 영향 IV. 생장상내 온도 및 광환경 변화에 따른 생장반응)

  • 정순주;이범선;권용웅
    • Journal of Bio-Environment Control
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    • v.4 no.2
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    • pp.125-130
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    • 1995
  • Observations on the seedling growth of red pepper responding to different temperature(10, 20, 3$0^{\circ}C$) and light intensity(5, 15, 25 klux) were made in the growth Chamber during 7 weeks. The results obtained were as follows; 1. Best results of the combinations of temperature and light intensity were obtained from the combinated treatment of 3$0^{\circ}C$ and 25klux. At all of the temperature levels in this experiment, the more the light intensity is high, the more the growth is favor, but at low temperature below 2$0^{\circ}C$ and low light intensity below 15 klux, the growth of red pepper seedlings was decreased markedly. 2. Multiple regression polynomial equations of the characteristics of red pepper seedlings grown in the different combinations of temperature and light intensity fitted well in the plant height, number of leaves, leaf area, stem dry weight and shoot dry weight. 3. Multiple regression polynomial equation to the shoot dry weight was partial differentiated and diagrammatized the response surface using its theoretical value. Light intensity affected more to the shoot dry weight in the temperature below 2$0^{\circ}C$ but above 2$0^{\circ}C$ the role of the temperature showed greatly influence however, interaction effects of light intensity and temperature showed strongly.

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Effect of Boron in Nutrient Solution on Root Development and Freezing Tolerance of Mulberry

  • Le, Quang-Tu;Keu
    • Journal of Sericultural and Entomological Science
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    • v.37 no.2
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    • pp.99-108
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    • 1995
  • The experiment was carried out to define the effect of the boron in nutrient solution on the development of mulberry root and cold damage. The length of shoots only attained about 50cm and then stopped in case of boron deficiency, while the mulberry trees developed vigorous and attained over 190cm long under boron supply condition. When boron is deficient, the measles appeared on surface of the stem and the necrosis appeared on the petiole, midribs and veins of leaves. At 70 days after planting, almost all new roots and old roots changed to brown, the lateral roots became necrosis by boron deficiency. After three days of stopping boron supply, many new roots changed to brown and after two days of boron resupply, new roots began to grow out and then new roots normally developed. Content of boron in leaves and barks increased by the increase of boron concentration in nutrient solution and maximum boron content in leaves and barks was obtained with boron-sufficient treatment of 0.5ppm. Treatment of 0.5ppm boron supply indicated that the leaves and barks contained more phospholipid, protein, sugar, RNA and proline than treatment of 0.01ppm boron supply in nutrient solution. The cuttings grown in boron supply nutrition have a sufficient tolerance at -10$^{\circ}C$ and -15$^{\circ}C$ for 24 hours while cuttings grown in boron-deficient nutrition have a weak tolerance at the same condition. As mentioned above, we can conclude that the effect of boron deficiency on root development is much severe and the relationship between the lack of boron and cold damage is very closely related.

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Characteristics of Tamarix chinensis Population in Shiwha Lake (시화호 내 위성류(Tamarix chinensis) 개체군의 특성)

  • Min, Byeong-Mee;Yi, Dong-Hoon;Lee, Hye-Won;Choi, Jong-In
    • The Korean Journal of Ecology
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    • v.28 no.5
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    • pp.327-333
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    • 2005
  • For the first time in Korea, plant size, distribution pattern and root growth form of Tamarix chinensis were surveyed at natural stand in Shiwha Lake, from June to July in 2005. T, chinensis grew in the range of 350 m towards north-south and 270 m in east-west direction. The mean number of stems germinated from same root system was 1.9. On the stem base, the numbers of living and dead plants were 1,398 and 114, respectively. Mean perimeter and height of 1,398 plants were $5.9{\pm}3.2$ cm and $159{\pm}51$ cm, respectively. By dividing into 10 classes based on the perimeter size, the largest number of plants were included in the second smallest class category. However, by dividing into 10 classes on the bases of plant height, variation in the number of plants along the height showed normal distribution curve. The heights of dead plants were small in perimeter but diverse in height. On the root base, the number of plants was the greatest in the smallest size class, and conspicuously decreased with size increment. Distribution of T. chinensis was clumped pattern. Age of the largest plant was 8-year. T. chinensis had two types of root growth. One was horizontal growth in the periphery of soil surface, and the other vertical growth.

Effect of Space Limitation of Rhizosphere on Morphology and Development of Root System in Tobacco Seedlings (담배 육묘시 근권의 공간 제한이 근계의 형태와 발달에 미치는 영향)

  • 이상각;심상인;강병화
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.41 no.4
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    • pp.475-481
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    • 1996
  • This study was carried out to acquire the basic information of root growth under different pot size, imposing different space limitation on rhizosphere. Different size of pots that had same surface area but different depth, 5cm(Iength)$\times$5cm(width)$\times$30, 15, 5cm(depth), were used during the seedling stage of tobacco plant. Space limitation on rhizosphere affected not only the aerial growth, stem height, leaf area and shoot dry weight, but also root growth and root architecture. Aerial growth was highly related to growth of underground part, so space limitation on rhizosphere decreased aerial growth. Limitation on pot volume by reducing pot depth induced new rooting on crown. Root number and relative multiplication rate were higher in small pot that had 5cm depth than large pot, but total root length and mean extension rate showed reverse patterns. Root numbers of 1st order and 2nd order were increased as pot depth was increased, but the root number of 3rd order was increased in small pot. Root system of seedling grown in large pot distributed more horizontally than that in small pot at 20 days after temporary planting (DAT), but the root architecture of seedling was reversed at 25 DAT.

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A Taxonomic Review of Phytolacca insularis (Phytolaccaceae) (섬자리공(Phytolacca insularis, 자리공과)의 분류학적 재검토)

  • Chae, Seung-Hee;So, Soonku;Han, Kyeongsuk;Kim, Muyeol;Park, Sang-Hong;Lee, Joongku
    • Korean Journal of Plant Taxonomy
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    • v.37 no.4
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    • pp.431-446
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    • 2007
  • The purpose of this study is to review the taxonomical position of Phytolacca insularis Nakai based on morphological characters and ITS sequences. Phytolacca insularis was similar to P. acinosa in the stem shape, inflorescence, apocarpous, eight pistils, eight stamens, pink anther, and eight fruits. But the unique difference between P. insularis and P. acinosa was leaf size and pistil color. Phytolaccri insularis and P. acinosa have a similar sculpturing patterns as an foveolate and microscabrate in pollen, but they differed from P. americana in having a bigger foveolae size in sculpture pattern. Phytolacca insularis and P. acinosa were similar in the seed size but different from P. americana by having a small size of seed. The seed surface of P. insularis and P. acinosa was similar with a irregularly undulate shape, but its feature of P. americana differed in having the reticulate shape. Phytolacc a insularis had identical ITS sequences with P. acinosa. Phytolacca insularis and P. acinosa have a close relationship in the morphological characters and ITS sequences. The examinations of morphology and ITS sequences suggest that P. insularis be a form of P. acinosa although it has been formerly treated as a distinct species.

Studies on the Mass Propagation of Pinellia ternata (Thunb.) Breit in Vitro (조직배양에 의한 반하〔Pinellia ternata(Thunb.) Briet〕의 대량번식에 관한 연구)

  • 최정식;나의식
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.31 no.1
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    • pp.30-42
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    • 1986
  • In order to find out the best media, explants and environmental conditions for induction of calluses and organogeneses of Pinellia ternata (Thunb.) Breit in vitro, various parts of adult have been cultured on Murashige & Skoog's medium containing various levels of 2,4-dichlorophenoxy acetic acid(2,4-D) and kinetin. The results obtained were as follows: Calluses were induced from the surface of apical meristem and leaf tissue. Formation and growth of calluses in petiole ex plants were best on the MS medium complemented with 2,4-D 2.0 mg/l and kinetin 0.2mg/l. But callus formation in stem ex plants of the nearest tuber was not induced at all kinds of media. Plantlets occured at all treatment except absence of growth regulator. Their numbers, size, leaf and fresh weight were promoted by 2,4-D 2.0mg/l and kinetin 0.2mg/l. Root growth was increased on the medium containing higher 2,4-D concentrations. Size and fresh weight of callus were increased at 25$^{\circ}C$ compared with 10, 20 and 30$^{\circ}C$, respectively. Optimal pH value was at 6.0 for growth of callus. Morphological aberrations were observed in plantlets, especially in regenerated leaves. The separation of the broad leaved plantlets and albino were observed in some cultures. Growth of plantlets after transplantation was best in pots with the sterilized vermiculte. But abnormal variants withered up.

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Fruit Quality and Fruit Locule Air Hole of Kiwifruit (Actinidia deliciosa cv. Hayward) Affected by Early Defoliation (조기낙엽이 참다래 '헤이워드' 과실 바람들이와 품질에 미치는 영향)

  • Kwack, Yong-Bum;Kim, Hong-Lim;Choi, Young-Hah;Lee, Jae-Han;Kim, Jin-Gook;Lee, Yong-Bok
    • Korean Journal of Environmental Agriculture
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    • v.31 no.3
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    • pp.229-234
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    • 2012
  • BACKGROUND: The fruit quality and flowering characteristics of Kiwifruit (A. deliciosa cv. Hayward) in the following year is known to be affected by the extent and timing of defoliation of the current year. In korea, the production of kiwi, which is a perennial, straggling deciduous warm-temperate fruit, is often restricted by wind damage due to typhoons resulting to defoliation at the middle season of its growing period. In this paper, we report the effect of the different timing of defoliation and severities at the current season to the kiwifruit quality. METHODS AND RESULTS: Twenty seven-year-old 'Hayward' trees grown under polyethylene film rain-shelter were defoliated in different days from August to September at seven day-intervals. In each day, 0, 25, 50, 75 and 100% of leaves were removed from the trees. Fruits from each treatment were classified into four floating types (L: lying in bottom, S: standing on bottom, F: floating and SF: floating at the surface of water) by submerging them into tap water. Defoliation of kiwifruit trees in August and September caused air holes in locules of inner pericarp. Increased number of air hole in locules of a fruit was observed in floating types F and SF, and most of the air holes were located in stem end. The defoliation of trees in August significantly reduced the ratio of L-floating type fruits, which have the least number of locule air holes. The extent of defoliation also affected the distribution of the four types, the more leaves removed, the less L-floating type fruits harvested. The weight of fruits from trees defoliated in August was lower than that of fruits from September. Soluble solids content decreased as the number of locule air holes increased. Negative correlations were observed between the extent of defoliation and the weight and soluble solids content of fruits. CONCLUSION: Early defoliation effect on kiwifruit locule air hole occurrence and fruit quality were more severe in August than in September. And also if the defoliation severity is over 25%, severe fruit quality reduction expected to happen due to increase of fruit locule air hole in the inner pericarp.

Crown Gall of Weeping Fig Caused by Agrobacterium larrymoorei and A. tumefaciens (Agrobacterium larrymoorei와 A. tumefaciens에 의한 벤자민고무나무 뿌리혹병)

  • Lee, Young-Kee;Hwang, Hye-Kyung;Hwang, Tae-Ho;Myung, Inn-Shik;Koo, Han-Mo;Cha, Jae-Soon
    • Research in Plant Disease
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    • v.12 no.3
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    • pp.189-196
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    • 2006
  • Crown gall on lower stem of weeping fig(Ficus benjamina Roxb.) was first observed at Daejon in 2003. Tumors were about 15 cm in size and semi-round with rough surface texture of dark brown color. Two virulent isolates among ten bacteria isolated from the tumor tissues were characterized. Their colonies were convex, glistening, circular with an entire edge, and white or tannish cream in color on potato dextrose agar supplemented with 0.5% $CaCO_3$. They were rod shape with peritrichous flagellae, gram-negative, aerobic growth, oxidase-positive, and grew on D1M agar. The isolates were identified as Agrobacterium larrymoorei and A. tumefaciens based on biochemical and physiological characteristics, fatty acid profiles and substrate utilization patterns. Seedlings of some host plants excepting grapevine produced typical galls two to three weeks after inoculation with cell suspensions of the virulent strains. This is the first report on crown gall of weeping fig in Korea.