• The Korean Journal of Malacology
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• v.27 no.2
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• pp.99-105
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• 2011

This study was conducted to compare the species composition of sessile organisms on the artificial substrates of PVC submerged at different time intervals and duration in Jangmok Bay, Geoje Island, southern coast of Korea. Three PVC plates were submerged at one month interval from March to October and retrieved in November, 2007. A mussel, Mytilus galloprovincialis exclusively occupied the artificial substrates submerged from March to April and occurred as a dominant species to July. An ascidian, Styela plicata occurred as a dominant sessile species from May to August. Balanus amphtrite, Bugula sp., and hydrozoans occurred as dominant species on the plates submerged from July to September. There was a mis-match between the peak time of settlement and dominance of sessile organisms due to the interspecies competitions when the PVC plates were retrieved in November. There was no clear relationship between submerged duration and the abundance of sessile organisms due to the different settlement period. M. galloprovincialis seemed to be a strong competitor which could exclude the previous recruiters of macroalgae by overgrowth and occupy the substrate surface and maintain its high population density by preventing the settlement of other species until late autumn. These results suggested that the composition of sessile organisms in vacant hard substrates could be determined by the combined effects of supply-timing of larvae and post-settlement competitions.

• The Korean Journal of Malacology
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• v.27 no.1
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• pp.29-33
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• 2011

This study was conducted to investigate the recruitment pattern of sessile organisms on the artificial substrates of PVC in Jangmok Bay, Geoje Island, southern coast of Korea. Five PVC plates were submerged from March to October, 2007 at one month interval, and two plates were retrieved after one month. The dominant recruiters were a green algae, Entermorpha prolifera in March, Mytilus galloprovincialis in April, M. galloprovincialis and Styela plicata in May, S. plicata and Bugula sp. in June. During August, Balanus amphtrite and anthozoans were dominant recruiters, and a serpulid worm, Hydroides ezoensis in October. There was a clear specific recruiting period of sessile faunas depending on their reproduction cycles in a sheltered embayment like Jangmok Bay.

• Molecules and Cells
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• v.39 no.8
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• pp.587-593
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• 2016

As sessile organisms, plants must be able to adapt to the environment. Plants respond to the environment by adjusting their growth and development, which is mediated by sophisticated signaling networks that integrate multiple environmental and endogenous signals. Recently, increasing evidence has shown that a bHLH transcription factor PIF4 plays a major role in the multiple signal integration for plant growth regulation. PIF4 is a positive regulator in cell elongation and its activity is regulated by various environmental signals, including light and temperature, and hormonal signals, including auxin, gibberellic acid and brassinosteroid, both transcriptionally and post-translationally. Moreover, recent studies have shown that the circadian clock and metabolic status regulate endogenous PIF4 level. The PIF4 transcription factor cooperatively regulates the target genes involved in cell elongation with hormone-regulated transcription factors. Therefore, PIF4 is a key integrator of multiple signaling pathways, which optimizes growth in the environment. This review will discuss our current understanding of the PIF4-mediated signaling networks that control plant growth.

• The Plant Pathology Journal
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• v.31 no.4
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• pp.323-333
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• 2015

As sessile organisms, plants are exposed to persistently changing stresses and have to be able to interpret and respond to them. The stresses, drought, salinity, chemicals, cold and hot temperatures, and various pathogen attacks have interconnected effects on plants, resulting in the disruption of protein homeostasis. Maintenance of proteins in their functional native conformations and preventing aggregation of non-native proteins are important for cell survival under stress. Heat shock proteins (HSPs) functioning as molecular chaperones are the key components responsible for protein folding, assembly, translocation, and degradation under stress conditions and in many normal cellular processes. Plants respond to pathogen invasion using two different innate immune responses mediated by pattern recognition receptors (PRRs) or resistance (R) proteins. HSPs play an indispensable role as molecular chaperones in the quality control of plasma membrane-resident PRRs and intracellular R proteins against potential invaders. Here, we specifically discuss the functional involvement of cytosolic and endoplasmic reticulum (ER) HSPs/chaperones in plant immunity to obtain an integrated understanding of the immune responses in plant cells.

• Molecules and Cells
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• v.42 no.4
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• pp.285-291
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• 2019

Eukaryotic cells use conserved quality control mechanisms to repair or degrade defective proteins, which are synthesized at a high rate during proteotoxic stress. Quality control mechanisms include molecular chaperones, the ubiquitin-proteasome system, and autophagic machinery. Recent research reveals that during autophagy, membrane-bound organelles are selectively sequestered and degraded. Selective autophagy is also critical for the clearance of excess or damaged protein complexes (e.g., proteasomes and ribosomes) and membrane-less compartments (e.g., protein aggregates and ribonucleoprotein granules). As sessile organisms, plants rely on quality control mechanisms for their adaptation to fluctuating environments. In this mini-review, we highlight recent work elucidating the roles of selective autophagy in the quality control of proteins and RNA in plant cells. Emphasis will be placed on selective degradation of membrane-less compartments and protein complexes in the cytoplasm. We also propose possible mechanisms by which defective proteins are selectively recognized by autophagic machinery.

• Ocean and Polar Research
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• v.43 no.4
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• pp.255-267
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• 2021

To understand the composition and community changes of benthic species by water depth (5 m, 20 m, 30 m) in the cage facilities, net substrate made of fish cages were installed at intervals of 2 months from March to September 2019, which is the main period of sessile organism recruitment. Water temperature and salinity varied in the ranges of 1~5℃ and 1~4 mg/L at 5 m from June to August, respectively, and less difference was observed according to water depth in other investigation periods. A total of 37 benthic animals were recruited, and Kamptozoa unid., Caprella scaura and Jassa slatteryi were verified during the entire study period. Mytilus galloprovincialis, a Mediterranean mussel, showed seasonality dominant only from spring to early summer (March to July). The community structure classified by temporal and spatial factors, and Bugula neritina, Kamptozoa unid., and Sertularella sp. contributed to the formation of the community. The depth of 5 m was exposed to environmental changes in water temperature and salinity temporally, so there was a seasonal variation in the composition of the sessile organism, but at depths of 20 m and 30 m, there was less significant environmental change and it showed relatively stable than 5 m.

• Journal of Environmental Science International
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• v.20 no.11
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• pp.1383-1394
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• 2011

Environmental impacts of suspended solids (SS) released in coastal area by dredging, reclamation and construction can cause serious damages to coastal habitats and benthic organisms. Acute toxicity tests (4-7 days) were conducted to identify the relationship between SS concentration and mortality of three marine benthic species; benthic copepod (Tigriopus japonicus) adult, Pacific abalone (Haliotis discus hannai) spat, and olive flounder (Paralichthys olivaceus) fry. Benthic copepod was the most sensitive to SS followed by olive flounder fry and Pacific abalone spat, with an $LC_{50}$ (lethal concentration of 50% mortality) value of 61.0 mg/L and LOEC (lowest observed effective concentration) value of 31.3 mg/L for benthic copepod. LOEC and 7 day-$LC_{50}$ for Pacific abalone spat were 500.0 mg/L and 1887.7 mg/L, and those for olive flounder fry were 125.0 mg/L and 156.9 mg/L, respectively. The tolerance limits of the test species to SS revealed the various concentration ranges of SS, which reflects the physiology and ecology of the test species. These results are very valuable for the determination of SS concentration of effluents released into the coastal area by dredging, reclamation and construction etc. Also, sharp increase of SS can cause long-term damages to the benthic and sessile fauna by blanketing of benthic substratum. These experimental procedures for marine bioassay and acute toxicity results can be a useful guideline for practical management planning of SS discharge into coastal area.

• Molecules and Cells
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• v.42 no.7
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• pp.503-511
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• 2019

As sessile organisms, plants have developed sophisticated system to defend themselves against microbial attack. Since plants do not have specialized immune cells, all plant cells appear to have the innate ability to recognize pathogens and turn on an appropriate defense response. The plant innate immune system has two major branches: PAMPs (pathogen associated molecular patterns)-triggered immunity (PTI) and effector-triggered immunity (ETI). The ability to discriminate between self and non-self is a fundamental feature of living organisms, and it is a prerequisite for the activation of plant defenses specific to microbial infection. Arabidopsis cells express receptors that detect extracellular molecules or structures of the microbes, which are called collectively PAMPs and activate PTI. However, nucleotidebinding site leucine-rich repeats (NB-LRR) proteins mediated ETI is induced by direct or indirect recognition of effector molecules encoded by avr genes. In Arabidopsis, plasmamembrane localized multifunctional protein RIN4 (RPM1-interacting protein 4) plays important role in both PTI and ETI. Previous studies have suggested that RIN4 functions as a negative regulator of PTI. In addition, many different bacterial effector proteins modify RIN4 to destabilize plant immunity and several NB-LRR proteins, including RPM1 (resistance to Pseudomonas syringae pv. maculicola 1), RPS2 (resistance to P. syringae 2) guard RIN4. This review summarizes the current studies that have described signaling mechanism of RIN4 function, modification of RIN4 by bacterial effectors and different interacting partner of RIN4 in defense related pathway. In addition, the emerging role of the RIN4 in plant physiology and intercellular signaling as it presents in exosomes will be discussed.

• Ocean and Polar Research
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• v.22 no.1
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• pp.25-36
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• 2000

The polychaeta fauna of the benthos and fouling of the northwestern part of the East Sea was studied during the period of 1971-1998. Three introduced species of polychaetes: Hydorides elegans (Haswell), Polydora limicola Annenkova, and Pseudopotamilla occelata Moore were found. H. elegans was discovered only on the artificial surfaces in Golden Horn Inlet (port Vladivostok), where this species may occur because of hermal pollution due to the discharge of warm waters of the water cooling system of Thermal-Electric Power Station-2 (TEPS-2) in Vladivostok which has been in function since 1971. The abundant population of H. elegans exists in the bay throughout the year and is capable of reproduction. The biomass of H. elegans may reach several $kg/m^2$ in August-September. P. limicola was found at the same time in the fouling of hydrotechnical structures of Vladivostok, Nakhodka, Holmsk and Uglegorsk ports with a biomass of $1-3kg/m^2$. Slow introduction of P. limicola occurs by coastal sail ships at present. The invasion of P. occelata into Peter the Great Bay may be an example of introduction and subsequent naturalization, which produced considerable changes in the structure of benthic communities. The three species of polychaetous sessile organisms and their invasion occurred by ocean and coasters sea-going ships (unintentional transport vectors). H. elegans and P. occelata were most probably transported to the northwestern part of the East Sea from Japan, and P.

• Journal of Aquaculture
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• v.16 no.3
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• pp.196-201
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• 2003

Sessile organisms such as the oyster Crassostrea gigas have been given much attention as a potential biomonitoring indicator to assess the impact of toxicants on aquatic organism. In this study, we exposed cells isolated from gill of oyster (Crassostrea gigas) to hydrogen peroxide in vitro. In addition oysters were in vivo exposed to pyrene and benzo(a)pyrene at various concentrations for 2 weeks. Comet assay was used to detect DNA single strand breaks and to investigate the application of this technique as a tool for aquatic biomonitoring. Hydrogen peroxide increased DNA single strand break with increasing concentration after 30 minutes exposure in vitro. Pyrene and benzo(a)pyrene caused DNA damage only at very high concentration (100 $\mu\textrm{g}$/L or 1000 $\mu\textrm{g}$/L) at two week exposure in vivo. DNA damage was relatively higher at hemocyte than at gill. It suggested that metabolized PAHs are transferred to hemolymph from digestive gland which have a relatively high enzyme activity, and attacked the DNA of hemocyte, while gill accumulated PAHs without degrading them to their metabolites due to low enzyme activity at gill. Both in vitro and in vivo exposure experiments showed that the comet assay is an effective tool on screening whether the organism are exposed to genotoxic contaminants.