• Title/Summary/Keyword: population biology

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Geological Distribution of Aquatic Invertebrates Living in Paddy Fields of South Korea (한국의 논에 서식하는 수서무척추생물의 지리적 군집 분포)

  • Kim, Myung-Hyun;Han, Min-Su;Nam, Hyung-Kyu;Kang, Kee-Kyung;Kim, Miran
    • Korean Journal of Soil Science and Fertilizer
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    • v.45 no.6
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    • pp.1136-1142
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    • 2012
  • The roles of paddy fields are re-evaluated as an artificial wetland. Although 44% of total aquatic invertebrates in South Korea are observed in a rice paddy, information of their distribution and characteristics of habitat use is limited yet. This study was carried out to provide information and characterizing distribution of community of aquatic invertebrates using a rice paddy through the South Korea. Aquatic invertebrates were collected at 284 sites of a rice paddy in South Korea from June to August, 2005, 2006 and 2007. We grouped sampling sites according to its species and population of aquatic invertebrates using a non-metric multidimensional scaling (NMDS). Total 21 orders 60 families 114 species were collected from a rice paddy. Coleoptera (25%), Heteroptera (17%), Diptera (17%) and Odonata (12%) were observed. Aquatic invertebrates were classified into three groups (Group 1: Gangwon, Gyeonggi and Chungbuk; Group 2: Chungnam, Jeonbuk, Jeonnam and Jeju; Group 3: Gyeongbuk and Kyeongnam). In Group 1, Muljarus japonicas distributed mainly Gangwondo and Chungbuk. In Group 2, Sigara nigroventralis and S. substriata were mainly observed. In Group 3, higher density of Daphnia sp. and Chironomidae gen. spp. was found in the southern part of Korea.

Effect of Culture Media on Embryonic Cell Growth in Zebrafish, Danio rerio (배지에 따른 제브라피쉬(Danio rerio) 배아 유래세포의 성장 효과에 관한 연구)

  • Lee, Ki-Young;Kim, Jong-Yeon;Jo, Soo-Gun
    • Development and Reproduction
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    • v.12 no.1
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    • pp.51-56
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    • 2008
  • To optimize the cell culture conditions of zebrafish embryonic cells, we compared the efficiency of three types of medium, DMEM, K-NAC and D-NAC. In this study, we showed that the cells grown in K-NAC have better plating efficiency than DMEM, especially in the case of low cell seeding density. However, cells grew slower in K-NAC than those in DMEM in confluent cultures. The effect of 0.1% zebrafish embryo extracts was minimal. The presence of 1% trout serum in culture medium significantly increased the growth rate of cells(p<0.05). No difference was found at $2{\sim}3{\times}10^5$ cell seeding density(p<0.05). At $4{\sim}5{\times}10^5$ cell seeding density, cells grew better in DMEM than K-NAC (p<0.1). The results suggest that supplementation of NAC and A2P in Keratinocyte SFM may improves plating efficiency when cells are plated at low population. No difference was found for cell growth in either medium with 5%, 10% or 15% FBS supplemented (p<0.05). Cells culture in D-NAC grew significantly better than those in DMEM(p<0.05). Our results clearly showed that the use of NAC and A2P in the culture medium has a positive effect on cell growth regardless of the amount of FBS added.

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Control of Bulking and Foaming Caused by Microthrix parvicella (Microthrix parvicella에 의한 슬러지 벌킹과 거품문제 해결)

  • Kang, Min-Gi;Kim, Young-Chul;Bang, Seong-Ho;Lee, Jin-Woo;Ha, Jun-Su
    • Journal of Korean Society of Environmental Engineers
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    • v.28 no.4
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    • pp.376-383
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    • 2006
  • This study was undertaken to control sludge bulking and foaming problems at the biological nutrient removal processes. A sewage treatment plant(STP) had a severe sludge settling problem usually over 90% in 30 min settled sludge volume and 300 mL/g in SVI and also thick and heavy brown foam in the secondary clarifiers. Identification study shows that causative filament was Microthrix parvicella which has not been previously reported in Korea. According to the inspection of processes and other related parameters, excessive growth of this particular filament was associated with high SRT caused by lack of proper capacity in sludge treatment line. After providing an extension of the sludge treatment capability, the plant can decrease SRT by wasting more sludge from the processes and also decreasing SS concentration in recycled stream. Subsequently we were able to control growth of M. parvicella. The SVI value was reduced to half of those observed during the severe bulking, but also sludge blanket and its concentration in the clarifier became compact and dense. However, decrease in population of M. parvicella caused increase of total phosphorus concentration in the effluent.

Status of Birds Using a Rice Paddy in South Korea (우리나라 논 이용 조류 현황)

  • Kim, Mi-Ran;Nam, Hyung-Kyu;Kim, Myung-Hyun;Cho, Kwang-Jin;Kang, Kee-Kyung;Na, Young-Eun
    • Korean Journal of Environmental Agriculture
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    • v.32 no.2
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    • pp.155-165
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    • 2013
  • BACKGROUND: Rice paddies not only produce food but also provides wildlife habitats. Although more than half agricultural land of South Korea is rice paddy, a few studies have been conducted in rice paddy ecosystem. We investigated a status of bird using a rice paddy in South Korea using published data. METHODS AND RESULTS: Birds using a rice paddy have been defined as birds which breed, rest or forage on rice paddy, bank, reservoirs or irrigation ditches. According to the publication from 1980s, birds using a rice paddy were total 47 families 279 species. Scolopacidae and Charadriidae (18%), Falconidae, Accipitridae and Strigidae (12%) and Anatidae (11%) used a rice paddy. Half of bird species using a rice paddy visited a dried rice paddy during the winter and 39.4% of them used a flooded rice paddy in spring, autumn or summer. Dependency on a rice paddy was high in ducks, egrets, cranes, and shorebirds. Population of dabbling ducks has decreased for last 12 years while cranes have increased. CONCLUSION(S): Rice paddies provide both migratory and terrestrial birds including endangered species for habitate all through the year in Korea.

Effects of Protox Herbicide Tolerance Rice Cultivation on Microbial Community in Paddy Soil (Protox 제초제저항성 벼 재배가 토양미생물 군집에 미치는 영향)

  • Oh, Sung-Dug;Ahn, Byung-Ohg;Kim, Min-Kyeong;Sohn, Soo-In;Ryu, Tae-Hun;Cho, Hyun-Suk;Kim, Chang-Gi;Back, Kyoung-Whan;Lee, Kijong
    • Korean Journal of Environmental Agriculture
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    • v.32 no.2
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    • pp.95-101
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    • 2013
  • BACKGROUND: Rice (Oryza sativa) is the most important staple food of over half the world's population. This study was conducted to evaluate the possible impact of transgenic rice cultivation on the soil microbial community. METHODS AND RESULTS: Microorganisms were isolated from the rhizosphere of GM and non-GM rice cultivation soils. Microbial community was identified based on the culture-dependent and molecular biology methods. The total numbers of bacteria, fungi, and actinomycete in the rhizosphere soils cultivated with GM and non-GM rice were similar to each other, and there was no significant difference between GM and non-GM rice. Dominant bacterial phyla in the rhizosphere soils cultivated with GM and non-GM rice were Actinobacteria, Firmicutes, and Proteobacteria. The microbial communities in GM and non-GM rice cultivated soils were characterized using the denaturing gradient gel electrophoresis (DGGE). The DGGE profiles showed similar patterns, but didn't show significant difference to each other. DNAs were isolated from soils cultivating GM and non-GM rice and analyzed for persistence of inserted gene in the soil by using PCR. The PCR analysis revealed that there were no amplified protox gene in soil DNA. CONCLUSION(S): These data suggest that transgenic rice does not have a significant impact on soil microbial communities, although continued research may be necessary.

Studios on the Pen Shell Culture Development (I) -Reproductive Ecology of Pen Shell in Yoja Bay- (키조개의 양식개발에 관한 연구(I) -여계만산 키조개의 번식생태-)

  • Yoo Sung Kyoo;Yoo Myong-Suk
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.17 no.6
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    • pp.529-535
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    • 1984
  • This study aims at obtaining the basic data for the development of pen shell culture at Yoja Bay, the southwest coast of Korea. The authors dealt with the annual gonadal changes of the pen shell, Atrina pectinata japonica, to find out the gametogenesis, reproductive cycle and spawning season, and to investigate the fluctuation in the larval occurence in Yoja Bay. From July 1983 to June 1984, an average of 20 individuals as specimens were monthly collected by commercial fishing dredge near Manwol island located at the mouth of Yoja Bay. The degree of gonadal development was determined by the histological observations as resting spent stage, early developmental stage, after developmental stage, early spawning stage, after spawning stage and degenerative stage. According to these degrees of gonadal development, annual reproductive cycle of the pen shell population was determined. From July to August, the gonads were changed through degenerative into resting stage and, in September and October, they became entirely empty gonads. From November they showed the first sign of gametogenesis developing very slowly. Nevertheless, the developing gametes did not increase in number probably owing to a phagocytic phenomenon by phagocytes which appeared in the gonad during this stage. Some individuals started spawning in April and in May majarity of individuals were in spawning stage. In June, majority of the individuals showed signs of degenerative stage. Therefore, the authors came to a conclusion that the pen shells in Yoja Bay spawn chiefly in May. And this is also supported by the result of the survey on the planktonic occurrences of the pen shell larvae. Namely, there were no larvae at all in April, only a few in May and many in June by vertical water sampling.

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Breast Cancer Characteristics and Survival Differences between Maori, Pacific and other New Zealand Women Included in the Quality Audit Program of Breast Surgeons of Australia and New Zealand

  • Campbell, Ian;Scott, Nina;Seneviratne, Sanjeewa;Kollias, James;Walters, David;Taylor, Corey;Roder, David
    • Asian Pacific Journal of Cancer Prevention
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    • v.16 no.6
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    • pp.2465-2472
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    • 2015
  • Background: The Quality Audit (BQA) program of the Breast Surgeons of Australia and New Zealand (NZ) collects data on early female breast cancer and its treatment. BQA data covered approximately half all early breast cancers diagnosed in NZ during roll-out of the BQA program in 1998-2010. Coverage increased progressively to about 80% by 2008. This is the biggest NZ breast cancer database outside the NZ Cancer Registry and it includes cancer and clinical management data not collected by the Registry. We used these BQA data to compare socio-demographic and cancer characteristics and survivals by ethnicity. Materials and Methods: BQA data for 1998-2010 diagnoses were linked to NZ death records using the National Health Index (NHI) for linking. Live cases were followed up to December $31^{st}$ 2010. Socio-demographic and invasive cancer characteristics and disease-specific survivals were compared by ethnicity. Results: Five-year survivals were 87% for Maori, 84% for Pacific, 91% for other NZ cases and 90% overall. This compared with the 86% survival reported for all female breast cases covered by the NZ Cancer Registry which also included more advanced stages. Patterns of survival by clinical risk factors accorded with patterns expected from the scientific literature. Compared with Other cases, Maori and Pacific women were younger, came from more deprived areas, and had larger cancers with more ductal and fewer lobular histology types. Their cancers were also less likely to have a triple negative phenotype. More of the Pacific women had vascular invasion. Maori women were more likely to reside in areas more remote from regional cancer centres, whereas Pacific women generally lived closer to these centres than Other NZ cases. Conclusions: NZ BQA data indicate previously unreported differences in breast cancer biology by ethnicity. Maori and Pacific women had reduced breast cancer survival compared with Other NZ women, after adjusting for socio-demographic and cancer characteristics. The potential contributions to survival differences of variations in service access, timeliness and quality of care, need to be examined, along with effects of comorbidity and biological factors.

Molecular Analysis of Bacterial Community Structures in Paddy Soils for Environmental Risk Assessment with Two Varieties of Genetically Modified Rice, Iksan 483 and Milyang 204

  • Kim, Min-Cheol;Ahn, Jae-Hyung;Shin, Hye-Chul;Kim, Tae-Sung;Ryu, Tae-Hun;Kim, Dong-Hern;Song, Hong-Gyu;Lee, Geon-Hyoung;Ka, Jong-Ok
    • Journal of Microbiology and Biotechnology
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    • v.18 no.2
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    • pp.207-218
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    • 2008
  • The impacts of planted transgenic rice varieties on bacterial communities in paddy soils were monitored using both cultivation and molecular methods. The rice field plot consisted of eighteen subplots planted with two genetically modified (GM) rice and four non-GM rice plants in three replicates. Analysis with denaturing gradient gel electrophoresis (DGGE) of PCR-amplified 16S rRNA genes revealed that the bacterial community structures were quite similar to each other in a given month, suggesting that there were no significant differences in bacterial communities between GM and non-GM rice soils. The bacterial community structures appeared to be generally stable with the seasons, as shown by a slight variation of microbial population levels and DGGE banding patterns over the year. Comparison analysis of 16S rDNA clone libraries constructed from soil bacterial DNA showed that there were no significant differences between GM and non-GM soil libraries but revealed seasonal differences of phyla distribution between August and December. The composition profile of phospholipid fatty acids (PLFA) between GM and non-GM soils also was not significantly different to each other. When soil DNAs were analyzed with PCR by using primers for the bar gene, which was introduced into GM rice, positive DNA bands were found in October and December soils. However, no bar gene sequence was detected in PCR analysis with DNAs extracted from both cultured and uncultured soil bacterial fractions. The result of this study suggested that, in spite of seasonal variations of bacterial communities and persistence of the bar gene, the bacterial communities of the experimental rice field were not significantly affected by cultivation of GM rice varieties.

Spawning Ecology of Anchovy, Engraulis japonica, in the Southern Waters of Korea (한국 남해 멸치의 산란 생태)

  • KIM Jin-Yeong;KANG Yong-Joo
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.25 no.5
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    • pp.331-340
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    • 1992
  • A study on the spawning and fecundity of anchovy, Engraulis japonica, in the southern waters of Korea was carried out on the basis of data collected from gonad examination during March-september, 1991. Spawning period showed that length class in the range of 9-12cm fork length occurred during May-July, whereas adults above 12cm from March to September. In comparison with the oocyte compositions of the ovary of anchovy adult caught at sunrise and sunset, together with variation of the gonad weight and sex ratio of the fish sampled during time between 14:00 and 21:00, considering that the oocyte more than 600um in diameter existed much in the samples from sunset compared with that from sunrise, as well as a decreasing trend in the gonad weight and proportion of female of anchovy taken around sunset, spawning was estimated to occur mainly after sunset. The proportion of the adult with a pronounced peak above 600um in oocyte composition was estimated to be about $20\%$ of the spawning population. Fecundity was estimated to the range of about 23,000-315,000 with batch fecundity of 1,857-8,223 and specific batch fecundity of $438\pm146$.

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STUDIES ON THE FISHERY BIOLOGY OF THE PACIFIC SAURY, COLOLABIS SAIRA OF THE EAST COAST OF KOREA 1. Numbers of Vertebrae, Gill Rakers and Relative Growth (꽁치의 어업생물학적 연구 1. 척추골수, 새파수 및 상대성장)

  • Kim Ki-Joo
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.4 no.1
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    • pp.7-16
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    • 1971
  • This paper deals with the numbers of vertebrae, gill rakers and relative growth of the Pacific saury, Cololabis saira along the eastern coast of Korea in May, July and December 1970. About 90 percent of the total fish population possessed 64-66 vertebrae with the mean of 64.80 and the mode of 65. The number of gill rakers varied from 33 to 44 in December with the mean of 37.08. With regard to the number of vertebrae and gill rakers of the medium (26.0-28.0 cm in fork length) and large (30.0-31.0 cm in fork length) sized groups, there are similarities between the northbound modium sized group and the southbound large sized one, and also between the southbound medium and southbound large sized groups. Although no correlation was found between the numbers of vertebrae and gill rakers, in December the number of vertebrae of the large sized group exceeded that of the medium sized group, and on the other hand the number of gill rakers of the large sized group was fewer than that of the meduim sized one. There was a tendency of decreasing in ratio of the head length to the fork length as the latter increased, The relationships between the fork length and the head length varied depending on the northbound and southbound migration of the fish. The same tendency was also seen in the relationship between the fork length and the body weight. The body weight increased from July to December (from medium to largo sized group) showed more than twice than that from December to the following July (from medium to large sized group). The coefficient of fatness remained constant in December, but a distinct variation was found between the medium and large sized groups in July, corresponding to the spawning sea-son of the fish. Relatively higher coefficient was found in December as compared to that found in July.

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