• 생명과학회지
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• 제28권1호
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• pp.90-98
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• 2018

계란 가공 부산물인 난각(ES: Eggshell)은 탄산칼슘 함량이 높아 사료에 첨가하여 칼슘원으로 이용되고 있다. 본 연구에서는 ES를 생균제의 부형제인 운반체로서 활용 가능성을 처음으로 시도하였다. L. plantarum을 대두박(SBM: Soybean meal), 난각조각(ESL: Eggshell powder with large particles), 난각미세분말(ESF: Eggshell powder with fine particles), 그리고 이들의 복합운반체인 SBM+ESL과 SBM+ESF에 생균제를 흡착시켜 그 부착상태를 주사전자현미경으로 확인하였다. 이 중 복합운반체인 SBM+ESF는 상온에서 4주 동안 pH 7~8을 유지하면서 L. plantarum의 가장 높은 생존율을 보였다. 본 연구에 사용한 모든 생균제들은 보존기간 동안 $4^{\circ}C$에서는 높은 생존율을 보였다. $30^{\circ}C$에서는 유산균수는 크게 감소하였으나, B. licheniformis는 높은 생존율을 유지하였고 B. subtilis, B. amyloliquefaciens와 S. cerevisiae는 $2{\log}_{10}$ (CFU/g)정도 감소하였다. 상기 연구결과는 사료의 칼슘원으로 이용되는 난각미세분말(ESF)을 대두박과 혼합하여 사용하면 B. licheniformis를 비롯한 일부 생균제의 생존성을 향상시켜 부형제(운반체)로도 사용할 수 있음을 밝혔다.

• 한국터널지하공간학회 논문집
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• 제19권4호
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• pp.567-576
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• 2017

본 연구에서는 지반보강용 시멘트-페이스트에 초음파를 조사하여 온도변화, 점도, 일축압축강도, 육안관측 시험을 통해 초음파가 시멘트-페이스트에 어떠한 물리적 특성을 변화시키는지에 대하여 고찰하였다. 실험에 사용된 w/c는 50~100%까지 다양하게 진행하였으며, 그라우트재의 온도변화는 ${\pm}2^{\circ}C$내에서 범위를 벗어나지 않도록 조절하여 실험을 진행하였다. 실험결과 온도변화는 초음파 조사시간에 비례하여 일정하게 증가하였고, 초음파를 조사한 지반보강용 시멘트-페이스트 점도는 최대 40%까지 감소하는 것으로 나타났다. 일축압축강도는 평균 30% 증가하였으며 육안관측시험에서도 초음파를 조사한 시멘트-페이스트의 단면이 공극이 많이 감소하는 양상을 보였다.

• 한국축산식품학회지
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• 제40권6호
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• pp.1014-1032
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• 2020

This work aimed to investigate the psychobiotic effects of six bacterial strains on the mind and behavior of male Wistar rats. The probiotic (PRO) group (n=7) were rats pre-treated with antibiotics for 7 days followed by 14-day probiotic administration, antibiotics (ANT) group (n=7) were rats treated with antibiotics for 21 days without probiotics. The control (CON) group (n=7) were rats that received sham treatment for 21 days. The six bacterial strains with probiotic properties were mostly isolated from Thai fermented foods; Pedicoccus pentosaceus WS11, Lactobacillus plantarum SK321, L. fermentum SK324, L. brevis TRBC 3003, Bifidobacterium adolescentis TBRC 7154 and Lactococcus lactis subsp. lactis TBRC 375. The probiotics were freeze-dried into powder (6×10⁹ CFU/5 g) and administered to the PRO group via oral gavage. Behavioral tests were performed. The PRO group displayed significantly reduced anxiety level and increased locomotor function using a marble burying test and open field test, respectively and significantly improved short-term memory performance using a novel object recognition test. Antibiotics significantly reduced microbial counts in rat feces in the ANT group by 100 fold compared to the PRO group. Probiotics significantly enhanced antioxidant enzymatic and non-enzymatic defenses in rat brains as assessed using catalase activity and ferric reducing antioxidant power assay, respectively. Probiotics also showed neuroprotective effects with less pyknotic cells and lower frequency of vacuolization in cerebral cortex. This multi-strain probiotic formulation from Thai fermented foods may offer a potential to develop psychobiotic-rich functional foods to modulate human mind and behaviors.

• 생명과학회지
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• 제29권3호
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• pp.376-381
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• 2019

본 연구는 에탄올내성, 내열성, ${\beta}-glucanase$ 활성 및 xylose 대사가 가능한 새로운 생물시스템을 육종하기 위해 원형질체융합(protoplast fusion)이라는 방법을 사용하여 S. cerevisiae BYK-F11 균주와 P. $stipitis{\Delta}ura$ 균주와의 genome shuffling을 시도하였다. P. $stipitis{\Delta}ura$ 균주는 URA3 유전자를 결실시켜 uracil 영양요구주로 구축되었다. Protoplast fusion을 통해 몇몇의 융합체가 선별되었고, 두 모균주인 BYK-F11 균주와 P. $stipitis{\Delta}ura$ 균주의 핵형(karyotype)를 모두 가지는 BYKPS-F8 균주가 22개의 융합체중에서 최종 선정되었다. 이어 ${\beta}-glucanase$ 활성, xylose 이용능, 에탄올내성, 내열성 및 에탄올생산성에 대한 다양한 표현형이 조사되었다. BYKPS-F8 균주는 모균주인 BYK-F11 균주가 가지는 ${\beta}-glucanase$ 활성을 가지게 되었고, P. $stipitis{\Delta}ura$ 균주가 가지는 xylose 이용능도 모균주보다 1.2배 증가되었음을 확인할 수 있었다. BYKPS-F8 균주는 $40^{\circ}C$에서 내열성을 보였으며, 8% 에탄올이 첨가된 배지에서 모균주에 비해 에탄올 내성이 증가되었음을 확인 할 수 있었다. 20 g/l의 xylose가 함유된 배지에서 72시간 배양에 의해 약 7.5 g/l의 에탄올을 생산할 수 있었으며, 260시간의 장기간의 배양에도 BYKPS-F8균주에 도입한 다형질이 안정적으로 유지됨을 확인하였다. 따라서, 본 연구에서 사용된 균주 육종방법을 통해 다형질을 가진 다른 속간의 균주 융합 및 산업적으로 유용한 생물시스템의 육종이 가능함을 확인하였다.

• 생명과학회지
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• 제29권1호
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• pp.84-89
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• 2019

신규 항세균물질을 탐색하는 사전조사에서 몇몇 분리균주들이 그람양성 세균과 그람음성 세균 모두에 항균활성을 보이며, 심지어 methicillin내성 Staphylococcus aureus (MRSA)에도 항균활성을 나타내었다. 이들 균주 중에서 한 균주가 표현형과 계통분석을 이용하여 특히 16S 리보좀 RNA 유전자 염기서열에 기초하여 Pseudomonas aeruginosa로 동정되었다. BCNU 1204 균주의 항균물질은 King's medium B (pH 7.0)에서 $35^{\circ}C$의 온도 조건으로 4일 배양 후 가장 최대로 생산되었다. 항균물질을 각종 유기용매로 분획한 결과, P. aeruginosa BCNU 1204의 dichloromethane (DCM)분획과 ethylacetate (EA) 분획이 그람 양성 세균에 강력한 항균활성을 보였으며, 특히 ethylacetate (EA) 분획이 methicillin내성 Staphylococcus aureus (MRSA)에 대하여 강한 항균활성을 나타내었다. Recycling preparative LC와 preparative TLC 로 활성물질 하나(분획 5-2)를 분리하여 GC-MS 분석한 결과 phenazine 화합물에 속하는 phenazine-1-carboxylic acid 로 동정하였다. 그리고 MRSA 균주에 대한 최소저해농도(minimum inhibitory concentration, MIC)가 MRSA균주인 CCARM 3089, 3090, 3091 그리고 3095 균주에 대하여 각각 $25{\mu}g/ml$, $50{\mu}g/ml$, ${\geq}25{\mu}g/ml$ 그리고 ${\geq}50{\mu}g/ml$ 임을 확인하였다. 그러므로 P. aeruginosa BCNU 1204 분리균주는 항 MRSA 항생물질을 개발하기 위한 잠재 가치가 높은 생물자원으로 기대되며, P. aeruginosa BCNU 1204 균주로부터 리더 화합물을 획득하기 위한 보다 많은 연구가 요구된다.

• Biomolecules & Therapeutics
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• 제29권2호
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• pp.234-247
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• 2021

We used a heterozygous gene deletion library of fission yeasts comprising all essential and non-essential genes for a microarray screening of target genes of the antifungal terbinafine, which inhibits ergosterol synthesis via the Erg1 enzyme. We identified 14 heterozygous strains corresponding to 10 non-essential [7 ribosomal-protein (RP) coding genes, spt7, spt20, and elp2] and 4 essential genes (tif302, rpl2501, rpl31, and erg1). Expectedly, their erg1 mRNA and protein levels had decreased compared to the control strain SP286. When we studied the action mechanism of the non-essential target genes using cognate haploid deletion strains, knockout of SAGA-subunit genes caused a down-regulation in erg1 transcription compared to the control strain ED668. However, knockout of RP genes conferred no susceptibility to ergosterol-targeting antifungals. Surprisingly, the RP genes participated in the erg1 transcription as components of repressor complexes as observed in a comparison analysis of the experimental ratio of erg1 mRNA. To understand the action mechanism of the interaction between the drug and the novel essential target genes, we performed isobologram assays with terbinafine and econazole (or cycloheximide). Terbinafine susceptibility of the tif302 heterozygous strain was attributed to both decreased erg1 mRNA levels and inhibition of translation. Moreover, Tif302 was required for efficacy of both terbinafine and cycloheximide. Based on a molecular modeling analysis, terbinafine could directly bind to Tif302 in yeasts, suggesting Tif302 as a potential off-target of terbinafine. In conclusion, this genome-wide screening system can be harnessed for the identification and characterization of target genes under any condition of interest.

• 한국생물공학회:학술대회논문집
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• 한국생물공학회 2003년도 생물공학의 동향(XII)
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• pp.40-44
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• 2003

Soil-borne infectious disease including Pythium aphanidermatum and Rhizoctonia solani causes severe damage to plants, such as cucumber. This soil-borne infectious disease was not controlled effectively by chemical pesticide. Since these diseases spread through the soil, chemical agents are usually ineffective. Instead, biological control, including antagonistic microbe can be used as a preferred control method. An efficient method was developed to select an antagonistic strain to be used as a biological control agent strain. In this new method, surface tension reduction potential of an isolate was included in the ‘decision factor’ in addition to the other factors, such as growth rate, and pathogen inhibition rate. Considering these 3 decision factors by a statistical method, an isolate from soil was selected and was identified as Bacillus sp. GB16. In the pot test, this strain showed the best performance among the isolated strains. The lowest disease incidence rate and fastest seed growth was observed when Bacillus sp. GB16 was used. Therefore this strain was considered as plant growth promoting rhizobacteria (PGPR). The action of surface tension reducing component was deduced as the enhancement of wetting, spreading, and residing of antagonistic strain in the rhizosphere. This result showed that new selection method was significantly effective in selecting the best antagonistic strain for biological control of soil-borne infectious plant pathogen. The antifungal substances against P. aphanidermatum and R. solani were partially purified from the culture filtrates of Bacillus sp. GB16. In this study, lipopeptide possessing antifungal activity was isolated from Bacillus sp. GB16 cultures by various purification procedures and was identified as a surfactin-like lipopeptide based on the Fourier transform infrared spectroscopy (FT-IR), nuclear magnetic resonance (NMR), high performance liquid chromatography mass spectroscopy (HPLC-MS), and quadrupole time-of-flight (Q-TOF) ESI-MS/MS data. The lipopeptide, named GB16-BS, completely inhibited the growth of Pythium aphanidermatum, Rhizoctonia solani, Penicillium sp., and Botrytis cineria at concentrations of 10 and 50 mg/L, respectively. A novel method to prevent the foaming and to provide oxygen was developed. During the production of surface active agent, such as lipopeptide (surfactin), large amount of foam was produced by aeration. This resulted in the carryover of cells to the outside of the fermentor, which leads to the significant loss of cells. Instead of using cell-toxic antifoaming agents, low amount of hydrogen peroxide was added. Catalase produced by cells converted hydrogen peroxide into oxygen and water. Also addition of corn oil as an oxygen vector as well as antifoaming agent was attempted. In addition, Ca-stearate, a metal soap, was added to enhance the antifoam activity of com oil. These methods could prevent the foaming significantly and maintained high dissolved oxygen in spite of lower aeration and agitation. Using these methods, high cell density, could be achieved with increased lipopeptide productivity. In conclusion to produce an effective biological control agent for soil-borne infectious disease, following strategies were attempted i) effective screening of antagonist by including surface tension as an important decision factor ii) identification of antifungal compound produced from the isolated strain iii) novel oxygenation by $H_2O_2-catalase$ with vegetable oil for antifungal lipopeptide production.

• Journal of Microbiology and Biotechnology
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• 제22권11호
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• pp.1532-1539
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• 2012

The ${\alpha}$-galactosidase-coding gene agaAJB13 was cloned from Sphingomonas sp. JB13 showing 16S rDNA (1,343 bp) identities of ${\leq}97.2%$ with other identified Sphingomonas strains. agaAJB13 (2,217 bp; 64.9% GC content) encodes a 738-residue polypeptide (AgaAJB13) with a calculated mass of 82.3 kDa. AgaAJB13 showed the highest identity of 61.4% with the putative glycosyl hydrolase family 36 ${\alpha}$-galactosidase from Granulicella mallensis MP5ACTX8 (EFI56085). AgaAJB13 also showed <37% identities with reported protease-resistant or Sphingomonas ${\alpha}$-galactosidases. A sequence analysis revealed different catalytic motifs between reported Sphingomonas ${\alpha}$-galactosidases (KXD and RXXXD) and AgaAJB13 (KWD and SDXXDXXXR). Recombinant AgaAJB13 (rAgaAJB13) was expressed in Escherichia coli BL21 (DE3). The purified rAgaAJB13 was characterized using p-nitrophenyl-${\alpha}$-D-galactopyranoside as the substrate and showed an apparent optimum at pH 5.0 and $60^{\circ}C$ and strong resistance to trypsin and proteinase K digestion. Compared with reported proteaseresistant ${\alpha}$-galactosidases showing thermolability at $50^{\circ}C$ or $60^{\circ}C$ and specific activities of <71 U/mg with or without protease treatments, rAgaAJB13 exhibited a better thermal stability (half-life of >60 min at $60^{\circ}C$) and higher specific activities (225.0-256.5 U/mg). These sequence and enzymatic properties suggest AgaAJB13 is the first identified and characterized Sphingomonas ${\alpha}$-galactosidase, and shows novel protease resistance with a potential value for basic research and industrial applications.

• Smart Structures and Systems
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• 제21권5호
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• pp.687-694
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• 2018

The problem of wheel tread defects has become a major challenge for the health management of high-speed rail as a wheel defect with small radius deviation may suffice to give rise to severe damage on both the train bogie components and the track structure when a train runs at high speeds. It is thus highly desirable to detect the defects soon after their occurrences and then conduct wheel turning for the defective wheelsets. Online wheel condition monitoring using wheel impact load detector (WILD) can be an effective solution, since it can assess the wheel condition and detect potential defects during train passage. This study aims to develop an FBG-based track-side wheel condition monitoring method for the detection of wheel tread defects. The track-side sensing system uses two FBG strain gauge arrays mounted on the rail foot, measuring the dynamic strains of the paired rails excited by passing wheelsets. Each FBG array has a length of about 3 m, slightly longer than the wheel circumference to ensure a full coverage for the detection of any potential defect on the tread. A defect detection algorithm is developed for using the online-monitored rail responses to identify the potential wheel tread defects. This algorithm consists of three steps: 1) strain data pre-processing by using a data smoothing technique to remove the trends; 2) diagnosis of novel responses by outlier analysis for the normalized data; and 3) local defect identification by a refined analysis on the novel responses extracted in Step 2. To verify the proposed method, a field test was conducted using a test train incorporating defective wheels. The train ran at different speeds on an instrumented track with the purpose of wheel condition monitoring. By using the proposed method to process the monitoring data, all the defects were identified and the results agreed well with those from the static inspection of the wheelsets in the depot. A comparison is also drawn for the detection accuracy under different running speeds of the test train, and the results show that the proposed method can achieve a satisfactory accuracy in wheel defect detection when the train runs at a speed higher than 30 kph. Some minor defects with a depth of 0.05 mm~0.06 mm are also successfully detected.

• Applied Biological Chemistry
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• 제40권2호
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• pp.157-162
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• 1997

Cephem계 항생물질의 기본 구조인 7-aminocephalosporanic acid (7-ACA)의 $C_3$ 위치에 thiol기를 도입하고 $C_7$ 위치 aminothiazole기를 결합시킨 신규 화합물(YH-487)에 대한 감염치료효과, 체내동태 그리고 이의 투여에 의한 흰쥐의 장내균총들의 영향에 관하여 검토한 결과, YH-487을 흰쥐에 꼬리정맥을 통하여 20mg/kg으로 투여시 혈중 최고농도 등 체내동태는 제 3세대 ${\beta}-lactam$계 약물인 cefotaxime 등과 유사한 결과를 보였으며 장기조직으로의 이행성은 신장으로의 이행율이 가장 좋았고 배설은 신장 배설 타입이었으며 배설된 약물은 체내의 대사에 의한 변화를 받지 않았다. 또한 YH-487의 대장균 감염증에 대한 치료효과는 cefotaxlme의 3배, cefotiam의 약 20배 정도 높았다. 한편 YH-487의 투여에 의한 흰쥐의 장내 균총의 변화는 Enterobacter와 Bacteroides속 등 Gram 음성 세균은 투여 후 균수가 크게 감소 하였으나 Lactobacillus, Bifidobacterium과 Staphylococcus속 등 Gram 양성 세균은 영향을 받지 않았다. 또한 YH-487을 연속 투여한 후 분리한 균주의 항균활성은 투여전의 균주와 차이가 없어 내성균의 출현 가능성이 낮았다.