• Journal of Microbiology and Biotechnology
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• v.11 no.1
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• pp.118-123
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• 2001

The alginate lyase A1-III gene of Sphingomonas species A1 is composed of 1,077 nucleotides, encoding a protein (359 amino acids) with a molecular mass of 40,322 Da. Recombinant A1-III expressed in Escherichia coli exhibited the same full enzymatic activity as native A1-III. In order to identify the critical residue for activity, a site-directed mutation was introduced into the A1-III gene (H192A, His192->Ala). Recombinant A1-III (H192A) exhibited a significant decrease in enzyme activity (one-thirty thousandth of that of A1-III), without any conformational change, as detected by the CD spectra in the far UV region. Also, the chemical modification of wild-type A1-III with methyl 4-nitro benzene sulfonate resulted in a 40% decrease from the initial activity, whereas the same modification of A1-III (H192A) produced no change in the activity. The role of His192 on the catalytic process was also explored based on a model of A1-III docked with mannuronic acid into the active site.

• The Korean Journal of Community Living Science
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• v.27 no.4
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• pp.891-906
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• 2016

This study examined the working site environment of Korean native cattle raising farmers and their actual condition of wearing personal protective equipment as part of preventing disasters during agricultural work. To this end, 160 Korean cattle raising farmers were surveyed and a site visit was performed on 10 farms. According to an examination of the cattle breeding environment, the major harmful factors were in the following order: fine dust (12.8%), organic feed dust (10.3%), contact with cattle (9.7%), manure (8.2%), germs and viruses (8.1%), harmful gases (7.4), contact with obstacles (6.7), and temperature (6.6%). The current status of the rate of wearing protection was in the order of gloves (20.9%), working hats (19.7%), boots (19.6%), masks (10.9%), protective clothing (8.9%), and specialized working clothing (6.6%). Nevertheless, most Korean cattle raising farmers recognized the risks when they did not wear protective equipment and the need for wearing protectors, but they mostly did not wear personal protective equipment due to a lack of knowledge on the selection of appropriate personal protective equipment and the discomfort they experience when they put on protectors. Even when they put on protective equipment, 38% was inappropriate for the farming work environment. Given the research results, improvements on and the development of specialized working clothing and personal protective equipment to protect farmers from harmful and dangerous materials from the cattle nurturing environment is necessary. Overall, based on the study data, objectified data collection, a determination of the necessary performance elements of personal protective equipment, and R&D will be needed through an on-site current status investigation.

• Journal of Embryo Transfer
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• v.21 no.4
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• pp.273-280
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• 2006

MC4R, PRKAG3, FABP3, and ESR have reported as important candidate genes related to some economic traits in pigs. To investigate the association between these genes and economic traits, the analysis of restriction fragment length polymorphism (RFLP) was conducted on 147 individuals (96 Durocs and 86 Korea native pigs; KNP) using single nucleotide polymorphism (SNP). Different genotype frequencies of 4 candidate genes were observed in Duroc and KNP. There were significant associations between MC4R polymorphic site and average daily gain (ADG, p<0.05) and backfat thickness (BF, p<0.05) in the Duroc, ADG (p<0.05) and days to 70 kg (p<0.05) in KNP. PRXAG3 polymorphic site were significantly .elated to BF (p<0.05) in the Duroc, ADG (p<0.05) and days to 70 kg (p<0.05) in the KNP. In FABP3, association with BF (p<0.05) in the Duroc, ADG (p<0.05) and days to 70 kg (p<0.05) in the KNP were found. ESR polymorphic site was not significantly associated to any other traits.

• BMB Reports
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• v.32 no.4
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• pp.326-330
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• 1999

An aspartase purified from Hafnia alvei was inactivated by diethylpyrocarbonate (DEP) in a pseudo-first-order inactivation. The first-order plot was biphasic. The inactivation process was not saturable and the second order rate constant was $1.3\;M^{-1}s^{-1}$. The inactivated aspartase was reactivated with NH₂OH. The difference absorption spectrum of DEP-inactivated vs native enzyme preparations revealed a marked peak around 242 nm. The pH dependence of the inactivation rate suggests that an amino acid residue having a pK value of 7.2 was involved in the inactivation. L-aspartate, fumarate (substrates), and chloride ion (inhibitor) protected the enzyme against inactivation, indicating that histidine residues for the enzyme activity are located at the active site of this aspartase. Inspection of the presence and absence of $Cl^-$ ion demonstrated that the number of essential histidine residues is less than two. Thus, one or two histidines are in or near the aspartate binding site and participate in an essential step of the catalytic reaction.

• International Journal of Fuzzy Logic and Intelligent Systems
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• v.4 no.2
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• pp.176-181
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• 2004

This paper introduces a Web site login system that uses user's native voice to improve the bother of remembering the ID and password in order to login the Web site. The DTW method that applies fuzzy inference is used as the speaker recognition algorithm. We get the ACC(Average Cepstrum Coefficient) membership function by each degree, by using the LPC that models the vocal chords, to block the recorded voice that is problem for the speaker recognition. We infer the existence of the recorded voice by setting on the basis of the number of zeros that is the value of the ACC membership function, and on the basis of the average value of the ACC membership function. We experiment the six Web sites for the six subjects and get the result that protects the recorded voice about 98% that is recorded by the digital recorder.

• Journal of the Korean Institute of Landscape Architecture
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• v.20 no.4
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• pp.1-11
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• 1993

This study was conducted to investigate the plant community structure and to propose ecological management planning for the urban forest on Sungdongku, Joongku and Yongsanku in Seoul. Field survey was excuted October 1991 and the results were as follows. Robinia pseudoacasia community covered 61.1% and Populus x albaglandulosa covered 3.8% of survey site II and survey site was covered by the deciduous-broad leaf mixtured forest. According to the human impact and inappropriate management impact, survey area was divided into five forest community. As for the analysis of plant community structure which was classified into five forest community, the importance values, ecological diversity, number of species, number of individuals, basal area and crown coverage of the native plant community showed relatively higher than community that vegetation deterioration degree by the human impact showed seriously. In landscape forest of Mt. Daehyun, it showed problems for the planting method and the soil condition. So it was proposed to management guide, vegetation restoration and soil management through ecological management planning based on above results.

• Korean Journal of Environment and Ecology
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• v.33 no.3
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• pp.280-291
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• 2019

A. antiquum, first observed in Jeju Samdo Island in 1949, was designated as the Natural Monument No. 18 in December 1962 in recognition of its academic value. In Korea, it grows in nature only in Samdo in Jeju Island. Although its natural habitat was greatly damaged and almost destroyed due to firewood, stealing, etc. After the emancipation, it has been maintained by the transplantation and restoration. The site observed by this study has been managed as a restricted area since 2011. Since it has been about 20 years since the restoration of the native site in the 2000s, it is necessary to check the official management history records, such as the origin of transplantation and restoration to monitor the changes in the growth status and to control the habitat. As the results of this study, we have secured the records of cultural property management history, such as the identification of native species and the transplantation and restoration records. We also examined the change of the growth and development of A. antiquum 20 years after the restoration. There are no official records of the individuals transplanted to the restored natural habitat of A. antiquum in the 1970s and 1980s, and there was a controversy about the nativeness of those individuals that were restored and transplanted in 1974 since they were Japanese individuals. The studies of identifying native as the results of this study, we have secured the records of cultural property management history, such as the identification of native species and the transplantation and restoration records. We also examined the change of the growth and development of A. antiquum 20 years after the restoration. There are two sites in natural habitat in Samdo Island. A total of 65 individuals grow in three layers on three stone walls in a site while 29 individuals grow in two columns in the other site. A. antiquum grows in an evergreen broad-leaved forest dominated by Neolitsea sericea, and we did not find any other individuals of naturally growing A. antiquum outside the investigated site. This study checked the distribution of A. antiquum seedlings observed initially after the restoration. There were more than 300 seedling individuals, and we selected three densely populated sites for monitoring. There were 23 A. antiquum seedlings with 4 - 17 leaves per individual and the leaf length of 0.5 - 20 cm in monitoring site 1. There were 88 individuals with 5 - 6 leaves per individual and the leaf length of 1.3 - 10.4 cm in monitoring site 2 while there were 22 individuals with 5 - 9 leaves per individual and the leaf length of 4.5 - 12.1 cm in monitoring site 3. Although the natural habitat of A. antiquum was designated as a restricted public area in 2011, there is a high possibility that the habitat can be damaged because some activities, such as fishing and scuba diving are allowed. Therefore, it is necessary to enforce the law strictly, to provide sufficient education for the preservation of natural treasures, and to present accurate information about cultural assets.

• Proceedings of the Korean Society for Applied Microbiology Conference
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• 2001.06a
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• pp.149-153
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• 2001

To investigate the mode of bactericidal action for antimicrobial peptide, pediocin, synthetic and mutant pediocins were prepared by direct chemical synthesis. Native pediocin was purified from Pedio-coccus acidilactici M and its conformational structure and bactericidal functions were analyzed and compared to synthetic pediocin. Schematic mode of pediocin actions, how pediocin binds on the target cell membrane, penetrates and makes tunnel are proposed. For these purposes, primary and secondary structures of pediocin was analyzed and disulfide bond assignment was also done. The pediocin purified from P. acidilactici M had high effective bactericidal ability against gram positive bacteria, especially Listeria monocytogenes and was very stable at extreme pHs and even at high temperatures such as autoclaving temperature (121$^{\circ}C$). Pediocin was consisted of 44 amino acids with four cysteines. Novel synthetic peptides were achieved by solid phase peptide synthesis(SPPS) method. To explain the function of cysteine in C-terminal region, mutant pediocin, Ped[C24A＋C44A], was synthesized and their structural and biological functions were analyzed. Second mutant pediocin, Ped[KllE], was prepared to explain the function of lysine at 11 of N-terminal part of pediocin, especially loop of $\beta$-sheet, and to predict the initial binding site of pediocin. The native and synthetic pediocins was showed random coil conformation by spectropolarimetry in moderate conditions. This conformation was observed in extreme conditions such as high temperature and low and high pHs, also. Circular dichroism(CD) data also showed the existence of $\beta$-turn structure in N-terminal part both native and synthetic pediocins. A structural model for pediocin predicts that 18 amino acids in the N-terminal part of the peptide assume a three-strand $\beta$-sheet conformation. This random coil in C-terminal part of pediocin was converted to folding structure, helix structure, in nonpolar solvents such as alcohol and TFE. The disulfide bond between $^{9}$ Cys and $^{14}$ Cys was concrete and inevitable, however, evidences of disulfide bond between $^{24}$ Cys and $^{44}$ Cys was not. Data of Ped[C24A＋C44A], pediocin mutant showed that $^{44}$ Cys was required during killing the target cells but not inevitable, since Ped[C24A＋C44A] still have bactericidal activity but much less than native pediocin. Another pediocin mutant, Ped[KllE], had still bactericidal activity, was controversial to propose that positive charge like as $^{11}$ Lys in loop or hinge in bacteriocin bound or helped to binding to microorganism with electrostatic interaction between cell membrane especially teichoic acid and positive amino acid nonspecifically. The conformation of pediocin among native, synthetic and mutant pediocins did not show big difference. The conformations between oxidized and reduced pediocin were almost similar regardless of native or synthetic.

• Journal of the Korean Institute of Landscape Architecture
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• v.20 no.1
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• pp.39-52
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• 1992

In order to make plan for landscape construction by ecological methods in Yukong R & D Complex site, environmental factors and structure of plant community were investigated and analyzed around Yukong R & D Complex site of Daeduk. The result of this study were as follows: 1. In the result by the classification of TWINSPAN and ordination (DCA) techniques for analysing of plant community structure, thirty plant community structure, thirty plots were divided into four groups according to soil moisture and succession trends were seem to be from the development of subsidiary vegetation through Pinus densiflora, Quercus spp., Robinia psudoacasia community to Q. acutissima community. So this result was proposed to validity of vegetation introduction for planning of ecological landscape construction in studied site. 2. On the analysis of environmental factors by ordination techeniques, the plant community were divided by soil moisture. Soilcondition will be fertilized by introduction of broad-leaved tree and the development of succession trends from the present state of plant community to Q. acutissima community. 3. The problems of horiticultural places happened to studied site, so horiticultural places for ecological landscape construction was proposed planting techniques that were considered to soil suitability, economical efficiency, native species and wildlife. 4. If we attempt to ecological landscape designs on natural systems and use natural processes to achieve desired end-points, we are more likely to produce self-sustaining solutions.

• Asian-Australasian Journal of Animal Sciences
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• v.19 no.9
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• pp.1240-1244
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• 2006

The complete coding region sequence of the SRY gene in Chinese swamp buffalo was determined by PCR product sequencing. Comparison of swamp and river buffalo SRY gene sequences revealed a single nucleotide polymorphism (SNP, C/G) at the 202 bp site of the coding region. Further, a total of 124 male domestic buffaloes were genotyped at this SNP site using the PCR-SSCP method, and it was found that all Chinese indigenous swamp buffaloes had a guanine (G) at this site, while introduced river buffaloes and crossbred buffaloes showed a cytosine (C). Our findings suggested that this Y-linked SNP displayed type-specific alleles differentiating swamp and river buffaloes, and could be used as an effective marker to detect crossbreeding of swamp buffaloes with introduced river buffaloes in native buffalo populations, and thereby assess genetic diversity status and make proper conservation decisions for indigenous swamp buffaloes. In addition, this SNP can be potentially applied in the study of Asian water buffalo phylogeny from a male perspective.