• Title/Summary/Keyword: mating type A-1

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Anura Call Monitoring Data Collection and Quality Management through Citizen Participation (시민참여형 무미목 양서류 음성신호 수집 및 품질관리 방안)

  • Kyeong-Tae Kim;Hyun-Jung Lee;Won-Kyong Song
    • Korean Journal of Environment and Ecology
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    • v.38 no.3
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    • pp.230-245
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    • 2024
  • Amphibians, sensitive to external environmental changes, serve as bioindicator species for assessing alterations or disturbances in local ecosystems. It is known that one-third of amphibian species within the order Anura are at risk of extinction due to anthropogenic threats such as habitat destruction and fragmentation caused by urbanization. To develop effective protection and conservation strategies for anuran amphibians, species surveys that account for population characteristics are essential. This study aimed to investigate the potential for citizen participation in ecological monitoring using the mating calls of anura species. We also proposed suitable quality control measures to mitigate errors and biases, ensuring the extraction of reliable species occurrence data. The Citizen Science project was carried out nationwide from April 1 to August 31, 2022, targeting 12 species of anura amphibians in Korea. Citizens voluntarily participated in voice signal monitoring, where they listened to anura species' mating calls and recorded them using a mobile application. Additionally, we established a quality control process to extract reliable species occurrence data, categorizing errors and biases from citizen-collected data into three levels: omission, commission, and incorrect identification. A total of 6,808 observations were collected during the citizen participation in anura species vocalization monitoring. Through the quality control process, errors and biases were identified in 1,944 (28.55%) of the 6,808 data. The most common type of error was omission, accounting for 922 cases (47.43%), followed by incorrect identification with 540 cases (27.78%), and commission with 482 cases (24.79%). During the Citizen Science project, we successfully recorded the mating calls of 10 out of the 12 anuran amphibian species in Korea, excluding the Asian toads (Bufo gargarizans Cantor), Korean brown frog (Rana coreana). Difficulties in collecting mating calls were primarily attributed to challenges in observing due to population decline or discrepancies between the breeding season of non-emergent individuals and the timing of the citizen science project. This study represents the first investigation of distribution status and species emergence data collection through mating calls of anura species in Korea based on citizen participation. It can serve as a foundation for designing future bioacoustic monitoring that incorporates citizen science and quality control measures for citizen science data.

Characteristics of Lentinula edodes Fruiting Bodies Formed by Mono-mono Hybridization Using Mating Type Analysis (교배형 분석을 활용한 표고 교배균주 육성 및 자실체 발생 특성)

  • Yeongseon Jang;Mi-Jeong Park;Eunjin Kim;Min-Jun Kim;Yeun Sug Jeong;Kang-Hyeon Ka
    • The Korean Journal of Mycology
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    • v.51 no.4
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    • pp.389-396
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    • 2023
  • In this study, dikaryotic strains of Lentinula edodes were generated by mono-mono hybridization using mating type analysis and their fruiting body characteristics were investigated. Approximately 100 monokaryotic strains were isolated from the basidiospores of Sanbaekhyhang, and homokaryotic strains were isolated from Chungheung 1ho using protoplast isolation and regeneration. Their mating types were evaluated and a total of 60 dikaryotic strains were hybridized. Using these strains, fruiting bodies were produced and their characteristics were examined after cultivation on sawdust media. The results indicated that the rate of hybridization was 100% and that 55 of 60 strains formed fruiting bodies. These showed normal pileus and gill structures; however,10 strains also produced fruiting bodies with abnormal pileus and gill structures. The weight and size of the fruiting bodies differed depending on the strains. Overall, further studies are needed for predicting the characteristics of hybridized strains based on their parental strains.

Structure-Function Analysis of DNA Binding Domain of the Yeast ABF1 Protein (효모 ABF1 단백질의 DNA Binding 부위에 대한 구조 기능 연구)

  • Cho, Gi-Nam;Lee, Sang-Kyung;Kim, Hong-Tae;Kim, Ji-Young;Rho, Hyune-Mo;Jung, Gu-Hung
    • Korean Journal of Microbiology
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    • v.32 no.2
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    • pp.102-108
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    • 1994
  • Autonomously replicating sequence Binding Factor 1(ABF1) is a DNA-binding protein that specifically recognizes the $RTCRYN_5ACG$ at many sites in the yeast genome including the promoter element, mating-type silencer and ARS. To express the intact full-length ABF1 gene in E. coli, the ABF1 gene has been cloned into pMAL-c2 and His-61, Leu-353 and Leu-360 were substituted with other amino acid. ABF1 fusion proteins of wild type ABF1 and H61A, L353R and L360R nutants were purified by amylose resin affinity chromatography. Fusion protein of MBP and ABF1 was digested by Factor Xa and Characterized by gel retardation assay and complementation test. As aresult, we suggested that other DNA binding motif except atypical inc-finger motif is in the middle region of ABF1.

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Factors affecting transfer frequency of pAM$\beta$$_1$from streptococcus faecalis to lactobacillus casei (Streptococcus faecalis의 pAM $\beta$$_1$을 lactobacillus casei로의 전이에 영향을 미치는 요인)

  • 허정원;강성훈
    • Korean Journal of Microbiology
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    • v.28 no.3
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    • pp.188-191
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    • 1990
  • The streptococcal plasmid pAM$\beta_{1}$ (erythromycin resistance)was transferred via conjugation from Streptococcus faecalis DS 5 to Lactobacillus casei YIT 9018 by a filter mating method. The transfer frequency depended greatly on the type, pore size and side(front or back) of membrane filter. Water passing through a membrane under reduced pressure induced very tight contact between the cells, increased the transconjugation frequency about 1.3 to 37-fold when Millipore membrane filter (0.45.$\mu$m, front side up) was used.

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Screening for Antifungal Activity of the Pine Extracts Against Fusarium circinatum (Fusarium circinatum에 대한 소나무류 추출물의 항균력 검정)

  • Kim, Myoung-Ju;Shim, Gyu-Yul
    • Asian Journal of Turfgrass Science
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    • v.24 no.2
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    • pp.165-169
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    • 2010
  • Fusarium circinatum is the causal agent of the pine disease commonly referred to as pitch canker. In this study, F. circinatum was isolated from the diseased Pinus rigida in the golf courses, Korea. The morphological characteristics and the molecular features of the isolates were investigated to identify the pathogen. Histone H3 gene and IGS rDNA region was analyzed and consequently the isolates identified as F. circinatum. All of them have the same sequences and the mating type was determined as MAT1-1. The inhibitory effect of the methanol extracts from the disease resistant pine species, Pinus koraiensis and Pinus densiflora and a susceptible species, P. rigida were evaluated against the isolate, F. circinatum. As a result, the extracts of P. koraiensis and P. densiflora showed higher antifungal activity than that of the susceptible, P. rigida.

Evaluation of Pepper Genetic Sources (Capsicum spp.) for Disease Resistance Breeding (병저항성 육종을 위한 고추 유전자원의 저항성 평가)

  • Lee, Sang-Jun;Kim, Byung-Sup
    • Horticultural Science & Technology
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    • v.30 no.2
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    • pp.185-191
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    • 2012
  • For initiation of resistance breeding program of the red pepper, 21 PR ($Phytophthora$ resistance) cultivars, 36 cultivars collected from USA and 'Supermanitta' which is a susceptible cultivar against phytophthora blight were assayed against phytophthora blight, powdery mildew, and anthracnose. For seedling assay of phytophthora blight, three different mating type strains of $Phytophthora$ $capsici$ were used (A1, A2, Sterile). The result showed that most of the pepper of PR cultivars were resistance or moderately resistance at each mating type. 'Yeokganghongjanggun' was resistant to all three $P.$ $capsici$ strains and 'PR-Datta' and 'PR-Manitta' were resistant or moderately resistant at each type. In case of the collected cultivars, 'NuMex J.E.Parker', 'Omni Color', and 'SCM334' were resistant to all the three types and some cultivars including 'Sweet Banana' and 'Tabasco' were moderately resistant to each type fungi. 'Orange Habanero' and 'Black Cuban' were resistant to powdery mildew and 'Supermanitta' and 'PR Keumdong' were moderately resistant, while 'Santa Fe Grande', 'NuMex Pinata' and 'Puya' were very susceptible. In the case of anthracnose, 'Aji Limon' and 'Capsicum baccatum var. pendulum 3-4' were resistant and 'Pobalno', 'Omni Color', 'Negro', 'Mesilla', 'Mulato', 'Bhut Jolokia', 'Big Dipper', 'Black Cuban', 'NuMex Pinata', and 'NuMex Big Jim' were moderately resistant. The most PR cultivars except 'Taesan' were susceptible or very susceptible. These resistant individuals identified through this experiment can be used as sources of resistance to pepper pathogens in the future breeding programs.

The Studies on the Heterogenous Gene Expression in Schizophyllum commune (치마버섯에서 이형 유전자 발현에 관한 연구)

  • Park, Dong-Chul;Kim, Hyun-Jeong;Kim, Ok-Mi;Bae, Jun-Tae;Park, Sun-Hee;Lee, Byeung-Hun;Lee, Kap-Rang
    • The Korean Journal of Mycology
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    • v.26 no.1 s.84
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    • pp.103-107
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    • 1998
  • The trp2 gene encoding trifunctional enzyme in Coprinus cinereus was investigated the expression in the heterothallic mushroom species. To identify the homology of trp2 gene to Schizophyllum commune and Pleurotus ostreatus, southern hybridization was performed with plasmid pHIONA8 containing C. cinereus trp2 gene as a probe, which resulted in a strong signal indicating an homologous sequence to the chromosomal DNA of S. commune. About 50 transformants per dish was appeared in the complementation test by pHIONA8 using S. commune tryptophan auxotroph as host. In the mating test between transformants and other mating type alleles, the fruiting body of S. commune was formed at $30^{\circ}C$ in $2{\sim}3$ weeks.

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Genetic Analysis of Pigmentation in Cordyceps militaris

  • Shrestha, Bhushan;Choi, Sung-Keun;Kim, Ho-Kyoung;Kim, Tae-Woong;Sung, Jae-Mo
    • Mycobiology
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    • v.33 no.3
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    • pp.125-130
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    • 2005
  • Pigmentation of ascospore-derived isolates from seven different natural specimens of Cordyceps militaris EFCC C-5888, EFCC C-7159, EFCC C-7833, EFCC C-7991, EFCC C-8021, EFCC C-8023 and EFCC C-8179 was observed on the plates of Sabouraud Dextrose agar plus Yeast Extract at $25^{\circ}C$ under continuous illumination (500 lux). Pigmentation of the wild-type isolates of C. militaris was diverse ranging from yellowish white to orange, while white color was believed as a mutant. Inheritance of pigmentation was found to be controlled by both parental isolates when F1 progeny were analyzed. Pigmentation and mating type were shown to be either independent or distantly linked each other due to the high percentage of non-parental phenotypes among F1 progeny. Crosses between white mutant isolates of C. militaris yielded progeny with wild type pigmentations, indicating that the albino mutations in the parents were unlinked to each other.

First Report of Anthracnose of Shine Muscat Caused by Colletotrichum fructicola in Korea

  • Lim, Yang-Sook;Hassan, Oliul;Chang, Taehyun
    • Mycobiology
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    • v.48 no.1
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    • pp.75-79
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    • 2020
  • Anthracnose is one of the major problems for cultivating many crops, including vegetables, fruits, and trees. It is a continual threat for fruits grower worldwide. Colletotrichum fructicola was isolated from Shine Muscat berries showing typical anthracnose symptom in Korea. It was identified as C. fructicola based on morphology, pathological signs and concatenated sequences of internal transcribed spacer region of rDNA, glyceraldehyde-3-phosphate dehydrogenase, β-tubulin-2, chitin synthase-1, calmodulin, and the Apn2-Mat1-2 intergenic spacer and partial mating type (Mat1-2) gene. To the best of our knowledge, this is the first report first report of anthracnose of Shine Muscat caused by C. fructicola in Korea.

Analysis of Wear Debris on the Lubricated Machine Surface by the Neural Network (Neural Network에 의한 기계윤활면의 마멸분 해석)

  • 박흥식
    • Tribology and Lubricants
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    • v.11 no.3
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    • pp.24-30
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    • 1995
  • This paper was undertaken to recognize the pattern of the wear debris by neural network as a link for the development of diagnosis system for movable condition of the lubricated machine surface. The wear test was carried out under different experimental conditions using the wear test device was made in laboratory and wear testing specimen of the pin-on-disk type were rubbed in paraffine series base oil, by varying applied load, sliding distance and mating material. The neural network has been used to pattern recognition of four parameter (diameter, elongation, complex and contrast) of the wear debris and learned the friction condition of five values (material 3, applied load 1, sliding distance 1). The three kinds of the wear debris had a different pattern characteristic and recognized the friction condition and materials very well by the neural network. The characteristic parameter of the large wear debris over a few micron size enlarged recognition ability.