• 제목/요약/키워드: laboratory aim

검색결과 1,204건 처리시간 0.025초

Co-amplification at Lower Denaturation-temperature PCR Combined with Unlabled-probe High-resolution Melting to Detect KRAS Codon 12 and 13 Mutations in Plasma-circulating DNA of Pancreatic Adenocarcinoma Cases

  • Wu, Jiong;Zhou, Yan;Zhang, Chun-Yan;Song, Bin-Bin;Wang, Bei-Li;Pan, Bai-Shen;Lou, Wen-Hui;Guo, Wei
    • Asian Pacific Journal of Cancer Prevention
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    • 제15권24호
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    • pp.10647-10652
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    • 2015
  • Background: The aim of our study was to establish COLD-PCR combined with an unlabeled-probe HRM approach for detecting KRAS codon 12 and 13 mutations in plasma-circulating DNA of pancreatic adenocarcinoma (PA) cases as a novel and effective diagnostic technique. Materials and Methods: We tested the sensitivity and specificity of this approach with dilutions of known mutated cell lines. We screened 36 plasma-circulating DNA samples, 24 from the disease control group and 25 of a healthy group, to be subsequently sequenced to confirm mutations. Simultaneously, we tested the specimens using conventional PCR followed by HRM and then used target-DNA cloning and sequencing for verification. The ROC and respective AUC were calculated for KRAS mutations and/or serum CA 19-9. Results: It was found that the sensitivity of Sanger reached 0.5% with COLD-PCR, whereas that obtained after conventional PCR did 20%; that of COLD-PCR based on unlabeled-probe HRM, 0.1%. KRAS mutations were identified in 26 of 36 PA cases (72.2%), while none were detected in the disease control and/or healthy group. KRAS mutations were identified both in 26 PA tissues and plasma samples. The AUC of COLD-PCR based unlabeled probe HRM turned out to be 0.861, which when combined with CA 19-9 increased to 0.934. Conclusions: It was concluded that COLD-PCR with unlabeled-probe HRM can be a sensitive and accurate screening technique to detect KRAS codon 12 and 13 mutations in plasma-circulating DNA for diagnosing and treating PA.

Effect of Chlorella Growth Factor on the Proliferation of Human Skin Keratinocyte

  • Yong-Ho Kim;Yoo-Kyeong Hwang;Yu-Yon Kim;Su-Mi Ko;Jung-Min Hwang;Yong-Woo Lee
    • 대한의생명과학회지
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    • 제8권4호
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    • pp.229-234
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    • 2002
  • Chlorella is rich in chlorella growth factor (CGF). A review of the literature has described that CGF improves the capability of a Th1-based immunity, anticancer, antioxidant antibacterial activity, growth promotion, wound healing and so on, but has not studied the effect for the metabolism and the proliferation of human skin keratinocyte. The aim of this study was to examine the effect of metabolism and the proliferation of human skin keratinocyte in vitro. CGF was extracted with an autoclaving method which is a modified hot-water extraction method from dried chlorella and conformed by means of absorbance 0.22 at 260 nm. We have measured the extracellular acidification rate (ECAR) of the CGF by Cytosensor$^{\circledR}$ Microphysiometer and evaluated responsiveness depending upon the dosage on the HaCaT cell. The ECAR for the concentrations of 0.15, 1.5, 15, 150 $\mu\textrm{g}$/ml of CGF increased as a 103.6, 128.2, 149.0 and 423.9%, respectively compared to control (0.0 $\mu\textrm{g}$/ml, 100% ECAR). The ECAR for ErbBl tyrosine kinase inhibited by 4-anilinoquinazolines, $C_{16}$H$_{14}$BrN$_3$O$_2$.HCl on tile HaCaT cells with the amounts of 10 $\mu\textrm{g}$/ml of the CCF compared with 100 $\mu\textrm{g}$/ml of rhEGF. The conclusion of the study is that CGF might increase human epidermal keratinocyte proliferation through the interaction between the epidermal growth factor receptor and itself.

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실험실 화학사고 특성 분석에 관한 연구 (Study fo the Characteristics Analysis of Laboratory Chemical Accidents)

  • 이태형;이덕재;박중돈;신창현
    • 한국화재소방학회논문지
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    • 제30권3호
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    • pp.110-116
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    • 2016
  • 본 연구는 실험실 화학사고를 대상으로 각 연도별 사고현황, 사고유형, 사고원인 등의 화학물질사고 특성을 분석하였다. 그 결과 실험실에서 발생한 화학사고는 총 30건이었으며, 이중 25건이 학교 실험실에서 발생하였다. 실험실화학사고의 사고유형 중 유출 및 누출에 의한 사고가 가장 많이 발생했으며, 사고원인에 대해서는 작업자부주의로 인한 사고가 가장 많았던 것으로 나타났다. 실험실 사고예방과 연구활동 종사자의 보호를 위해서는 현장점검 강화, 유해화학물질 관리 감독 강화, 안전교육 강화 등 다각적인 정책적 노력이 필요할 것으로 사료된다.

Hygro-thermo-mechanical bending response of FG plates resting on elastic foundations

  • Merazka, Bouzid;Bouhadra, Abdelhakim;Menasria, Abderrahmane;Selim, Mahmoud M.;Bousahla, Abdelmoumen Anis;Bourada, Fouad;Tounsi, Abdeldjebbar;Benrahou, Kouider Halim;Tounsi, Abdelouahed;Al-Zahrani, Mesfer Mohammad
    • Steel and Composite Structures
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    • 제39권5호
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    • pp.631-643
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    • 2021
  • The aim of this work is to study the hygro-thermo-mechanical bending responses of simply supported FG plate resting on a Winkler-Pasternak elastic foundation. The effect transverse shear strains is taken into account in which the zero transverse shear stress condition on the top and bottom surfaces of the plate is ensured without using any shear correction factors. The developed model contains only four unknowns variable which is reduced compared to other HSDTs models. The material properties of FG-plate are supposed to vary across the thickness of the plate according to power-law mixture. The differential governing equations are derived based on the virtual working principle. Numerical outcomes of bending analysis of FG plates under hygro-thermo-mechanical loads are performed and compared with those available in the literature. The effects of the temperature, moisture concentration, elastic foundation parameters, shear deformation, geometrical parameters, and power-law-index on the dimensionless deflections, axial and transverse shear stresses of the FG-plate are presented and discussed.

Evaluation of Swab in Maintaining Survival Efficiency according to the CLSI M40-A2 Standard

  • Hyeokjin Kwon;Myeongguk Jeong;Yeeun Kim;Yunhee Chang;Myeonggi Jeong;Go-Eun Choi
    • 대한의생명과학회지
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    • 제29권4호
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    • pp.249-255
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    • 2023
  • Transporting clinical samples for microbiological testing requires a proper transport medium that guarantees the survival of microorganisms. Therefore, the aim of the study was to determine the ability of Amies Transport Medium (ATM) to maintain the viability of microorganisms in clinical specimens and its suitability as a transport medium for microbiological testing. This study evaluated the performance of swab provided by KS Co., Ltd. for three groups of bacteria comprising aerobic and facultative anaerobic bacteria, anaerobic bacteria, and fastidious bacteria, according to the Clinical and Laboratory Standard Institute (CLSI) 8.11.2. The ATM stability test was conducted by dividing the medium into two groups based on the product expiration date of use. All tested media, A and B (the date of manufacture and expiration date are different) showed ≥5 CFU, and there was no significant difference in the result values of Category A and Category B with different serial numbers for each test. The results of this experiment when cross-checked with the guidelines suggest that ATM is a suitable transport medium for microbiological testing, as it maintains the viability of microorganisms and is suitable for overgrowth trials. In addition, compared to the number of CFUs at the origin, the number of CFUs did not increase by more than 1 log after storage. These results have important implications for the development of transport media that can guarantee the survival of microorganisms in clinical specimens.

Vascular Endothelial Growth Factor (VEGF) Gene Polymorphisms and Breast Cancer Risk in a Chinese Population

  • Luo, Ting;Chen, Long;He, Ping;Hu, Qian-Cheng;Zhong, Xiao-Rong;Sun, Yu;Yang, Yuan-Fu;Tian, Ting-Lun;Zheng, Hong
    • Asian Pacific Journal of Cancer Prevention
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    • 제14권4호
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    • pp.2433-2437
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    • 2013
  • Vascular endothelial growth factor (VEGF) is a potent regulator of angiogenesis and thereby involved in the development and progression of solid tumours. Associations between three VEGF gene polymorphisms (-634 G/C, +936 C/T, and +1612 G/A) and breast cancer risk have been extensively studied, but the currently available results are inconclusive. Our aim was to investigate associations between three VEGF gene polymorphisms and breast cancer risk in Chinese Han patients. We performed a hospital-based case-control study including 680 female incident breast cancer patients and 680 female age-matched healthy control subjects. Polymerase chain reaction restriction fragment length polymorphism (PCR-RFLP) analysis was performed to detect the three VEGF gene polymorphisms. We observed that women carriers of +936 TT genotypes [odds ratio (OR) =0.46, 95% confidence interval (CI) = 0.28, 0.76; P=0.002] or 936 T-allele (OR=0.81, 95% CI= 0.68, 0.98; P=0.03) had a protective effect concerning the disease. Our study suggested that the +1612G/A polymorphism was unlikely to be associated with breast cancer risk. The -634CC genotype was significantly associated with high tumor aggressiveness [large tumor size (OR=2.63, 95% CI=1.15, 6.02; P=0.02) and high histologic grade (OR=1.47, 95% CI= 1.06, 2.03; P=0.02)]. The genotypes were not related with other tumor characteristics such as regional or distant metastasis, stage at diagnosis, or estrogen or progesterone receptor status. Our study revealed that the VEGF -634 G/C and +936 C/T gene polymorphisms may be associated with breast cancer in Chinese Han patients.

Low-Complexity Distributed Algorithms for Uplink CoMP in Heterogeneous LTE Networks

  • Annavajjala, Ramesh
    • Journal of Communications and Networks
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    • 제18권2호
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    • pp.150-161
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    • 2016
  • Coordinated multi-point transmission (CoMP) techniques are being touted as enabling technologies for interference mitigation in next generation heterogeneous wireless networks (HetNets). In this paper, we present a comparative performance study of uplink (UL) CoMP algorithms for the 3GPP LTE HetNets. Focusing on a distributed and functionally-split architecture, we consider six distinct UL-CoMP algorithms: 1. Joint reception in the frequency-domain (JRFD) 2. Two-stage equalization (TSEQ) 3. Log-likelihood ratio exchange (LLR-E) 4. Symmetric TSEQ (S-TSEQ) 5. Transport block selection diversity (TBSD) 6. Coordinated scheduling with adaptive interference mitigation (CS-AIM) where JRFD, TSEQ, S-TSEQ, TBSD and CS-AIM are our main contributions in this paper, and quantify their relative performances via the post-processing signal-to-interference-plus-noise ratio distributions.We also compare the CoMP-specific front-haul rate requirements for all the schemes considered in this paper. Our results indicate that, with a linear minimum mean-square error receiver, the JRFD and TSEQ have identical performances, whereas S-TSEQ relaxes the front-haul latency requirements while approaching the performance of TSEQ. Furthermore, in a HetNet environment, we find that CS-AIM provides an attractive alternative to TBSD and LLR-E with a significantly reduced CoMP-specific front-haul rate requirement.

4차 산업혁명과 임상검사과학기술에 관한 연구 (Study on the Fourth Industrial Revolution and Clinical Laboratory Science Techniques)

  • 성현호;최광모;정유현;조은경
    • 대한임상검사과학회지
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    • 제51권3호
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    • pp.386-395
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    • 2019
  • 본 연구의 목적은 4차 산업혁명 핵심기술과 연계된 임상검사 과학기술을 소개하는 것이다. 4차 산업혁명 핵심기술 중 인공지능, 사물인터넷, 블록체인, 로봇, 나노기술, 총 5개의 핵심기술을 테마별 분석 연계하였다. 임상병리사의 업무범위는 검사의 학검사, 병리검사, 임상생리검사이다. 검사의학 분야의 최근기술은 73개, 병리학 분야는 27개, 임상생리학 분야는 47개로 조사하였다. 4차 산업혁명과 임상검사과학기술 연계는 인공지능은 4개, 사물인터넷 3개, 블록체인 4개, 로봇 3개, 나노기술 15개로 조사하였다. 본 연구의 제한점은 모든 자료를 수집 분석에는 한계가 있었다. 비임상분야는 분석하지 못했다. 그리고 타당성 확인이 없었고 비슷한 연구가 없었다. 결론으로 4차 산업혁명 핵심기술과 임상검사과학기술은 밀접한 관련이 있다. 따라서 임상검사과학기술의 사회적 이익과 분야별 관련 후속 연구가 필요하다.

Kinesin superfamily member 15 knockdown inhibits cell proliferation, migration, and invasion in nasopharyngeal carcinoma

  • Yi Cai;Qianyue Lai;Xuan Zhang;Yu Zhang;Man Zhang;Shaoju Gu;Yuan Qin;Jingshen Hou;Li Zhao
    • The Korean Journal of Physiology and Pharmacology
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    • 제27권5호
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    • pp.457-470
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    • 2023
  • The aim of this study was to investigate the role of kinesin superfamily member 15 (KIF15) in nasopharyngeal carcinogenesis (NPC) and explore its underlying mechanisms. We employed various assays, including the CCK-8 assay, flow cytometry, the Transwell and scratch assay, Western blotting, and nude mice transplantation tumor, to investigate the impact of KIF15 on NPC. Our findings demonstrate that KIF15 plays a critical role in the proliferation, apoptosis, migration, and invasion of NPC cells. Furthermore, we discovered that silencing KIF15 inhibits cell proliferation, migration, and invasion while promoting apoptosis, and that KIF15's effect on NPC cell growth is mediated through the PI3K/AKT and P53 signaling pathways. Additionally, we showed that KIF15 promotes nasopharyngeal cancer cell growth in vivo. Our study sheds light on the significance of KIF15 in NPC by revealing that KIF15 knockdown inhibits NPC cell growth through the regulation of AKT-related signaling pathways. These findings suggest that KIF15 represents a promising therapeutic target for the prevention and treatment of NPC.

Effect of fermented blueberry on the oxidative stability and volatile molecule profiles of emulsion-type sausage during refrigerated storage

  • Zhou, Hengyue;Zhuang, Xinbo;Zhou, Changyu;Ding, Daming;Li, Chunbao;Bai, Yun;Zhou, Guanghong
    • Asian-Australasian Journal of Animal Sciences
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    • 제33권5호
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    • pp.812-824
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    • 2020
  • Objective: The aim of this work was to assess the effect of fermented blueberry (FB; 2%, 4%, and 6%) on the oxidative stability and volatile molecule profiles of emulsion-type sausage stored at 4℃ for 28 days. Methods: The antioxidant activity of FB was determined through radical-scavenging activity against 2, 2-diphenyl-1-picrylhydrazyl (DPPH) and hydroxyl radicals. Four formulations of sausage treatments with different FB levels (0%, 2%, 4%, 6%) were prepared, then peroxide value (POVs), thiobarbituric acid-reactive substances (TBARS) values, protein carbonyls and thiol groups were measured. The aroma profiles of sausages for each treatment was also determined. Results: The half maximal inhibitory concentration indicated that FB had greater scavenging ability than ascorbic acid against DPPH and hydroxyl radicals. Sausages with FB significantly retarded increases in POVs and TBARS, as well as in the content of protein carbonyls during all storage days (p<0.05). Particularly, 4% and 6% FB-treated sausages had better oxidation inhibition effects. However, FB accelerated the reduction in thiol groups (p<0.05). Additionally, FB inhibits the excessive formation of aldehyde compounds; for example, hexanal, which may cause rancid flavors, decreased from 58.25% to 19.41%. FB also created 6 alcohols (i.e., 2-methyl-1-propanol, 3-methyl-1-butanol, and phenylethyl alcohol), 5 ester compounds (i.e., ethyl acetate, ethyl lactate, and ethyl hexanoate) and 3-hydroxy-2-butanone in the sausages that contribute to sausage flavors. The principal component analysis showed that the aroma profiles of sausages with and without FB are easily identified. Conclusion: The addition of FB could significantly reduce the lipid and protein oxidation and improve oxidative stability for storage. Also, adding FB could inhibit rancid flavors and contribute to sausage flavors.