• Title/Summary/Keyword: hydrolyze

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Role and Action Mechanism of Secretory phospholipase $A_2$ in Macrophage Activation

  • Baek, Suk-Hwan
    • Proceedings of the PSK Conference
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    • 2002.10a
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    • pp.179-180
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    • 2002
  • The phospholipase $A_2$($PLA_2$) family represents a diverse group of enzymes that hydrolyze sn-2 fatty acid from the cell membrane. Several mammalian cytosolic $PLA_2$ and secretory $PLA_2$(s$PLA_2$) have been characterized and classified into different families. At present, 12 distinct sPLA$_2$s have been identified in mammals and classified into different groups, depending on their primary structures as characterized by the number and position of cysteine residues. (omitted)

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Changes of Phosphorylcholine Metabolism in Barley Seedlings during Greening (녹화중 보리유식물에서 Phosphorylcholine대사의 변화)

  • 유경희
    • Journal of Plant Biology
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    • v.31 no.4
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    • pp.259-266
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    • 1988
  • We investigated the activities of choline kinase, CTP: phosphorylcholine cytidyltransferase, and phosphatase during the greening of etiolated barley seedlings. Activities of choline kinase in leaves increased until 6 hours after illumination and decreased considerably after 6 hours, while activities of CTP: phosphorylcholine cytidyltransferase increased after illumination. On the contrary, changes of these two enzymatic activities showed reverse pattern in roots. The activities of phosphatase which hydrolyze phosphorylcholine decreased in leaves but changed little in roots during greening. The concentration of phosphorylcholine increased in xylem exudate and in roots during greening, while decreased in leaves. These results suggested that more phosphorylcholine arrive in leaves from roots as greening of etiolated barley seedlings.

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Thin Layer Chromatogram by an Extracellular ${\beta}$-Amylase of Bacillus sp. KYJ 963 and its Amino Acid Composition

  • Kim, Young-Jae
    • Journal of Life Science
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    • v.11 no.2
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    • pp.92-93
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    • 2001
  • Bacillus sp. KYJ 963, which was isolated from Korean salt-fermented anchovy (anchovy-jeot), produces an extracellular ${\beta}$-amylase. The analysis of the digestion products of substrates by thin layer chromatography from the purified protein revealed that the enzyme could not hydrolyze maltose or ${\alpha}$-cyclodextrin. In the amino acid composition analysis, the major characteristic of the ${\beta}$-amylase was the high proportion of amino acids that possess short side chain such as glycine and alanine.

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DIVERGENT ROLES OF A NOVEL PHOSPHOLIPASE $A_2$ IN CELL DEATH

  • Schnellmann, Rick G.
    • Proceedings of the Korean Society of Toxicology Conference
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    • 2002.11b
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    • pp.68-88
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    • 2002
  • Phospholipase A$_2$ (s) are esterases that hydrolyze the sn-2 ester bond in phospholipids, releasing a fatty acid and a lysophospholipid. We previously showed that most PLA$_2$ activity in rabbit renal proximal tubule cells (RPTC) was Ca$\^$2+/-independent, localized to the endoplasmic reticulum (ER-iPLA$_2$), and inhibited by the specific Ca$\^$2+/-independent PLA$_2$ inhibitor bromoenol lactone (BEL).(omitted)

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Trehalose Metabolism: Gate to Stress Signaling and Seed Development in Plant\ulcorner

  • Chung, H-J;Kim, Y-S;Lee, E-J;Kim, J-S;Shin, Y-M;Cho, I-S;Jin, H-O;Cho, J-W;Chung, C-H
    • Korean Journal of Plant Tissue Culture
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    • v.27 no.5
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    • pp.415-421
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    • 2000
  • The disaccharide trehalose ($\alpha$-D-glucopyranosyl-$\alpha$-D-glucopyranoside) is found in variety of organ-isms that are able to withstand almost complete desiccation. In order to identify the function of trehalose in plants, we isolated Arabidopsis trehalase (AtTRE) gene that encodes the enzyme able to hydrolyze trehalose to glucose, and trehalose-6-phosphate synthase isolog, TPS3 gene by RT-PCR. The AtTRE had the substrate specificity to hydrolyze only trehalose, and a broad pH range of enzyme activity. The AtTRE promoter/GUS reporter gene was expressed in cotyledons, mature leaf tissues including guard cells, and developing siliques. The GUS expression driven by AtTPS3 promoter was significant in root tissues, and the level of GUS activity was much higher than that of the pBll 21 control seedlings. The knockout of AtTPS3 gene in Arabidopsis resulted in the retarded root development, whereas the overexpression of AtTPS3 increased the root elongation in the presence of sucrose in MS medium. Possible functions of AtTRE and AtTPS3 in plant will be discussed. In addition, ectopic expression of yeast TPS1 driven by the inducible promoters in tobacco and potato conferred the plants on the drought and freezing tolerances.

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Plant Biomass Degradation and Bioethanol Production Using Hyperthermophilic Bacterium Caldicellulosiruptor bescii (고온성 세균 Caldicellulosiruptor bescii를 이용한 식물성 바이오매스의 분해와 바이오에탄올의 생산)

  • Lee, Han-Seung
    • Journal of Life Science
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    • v.25 no.12
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    • pp.1450-1457
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    • 2015
  • To overcome the depletion of fossil fuels and environmental problems in future, the research and production of biofuels have attracted attention largely. Thermophilic microorganisms produce effective and robust enzymes which can hydrolyze plant biomass and survive under harsh bioprocessing conditions. Caldicellulosiruptor bescii, which can degrade unpretreated plants and grow on them, is the one of the best candidates for consolidated bioprocessing (CBP). C. bescii can hydrolyze pectin efficiently as well as the major plant cell wall components, cellulose and hemicelluloses. Many glycosyl hydrolases and carbohydrate lyases with multidomain structure play an important role in plant biomass decomposition. Recently genetic tools for metabolic engineering of C. bescii have developed and bioethanol production from unpretreated biomass is achieved in C. bescii. Here, we review the recent studies for biomass degradation by C. bescii and bioethanol production in C. bescii in order to provide information about metabolic engineering of themophilic bacteria and biofuel development.

Engineered Recombinant PON1-OPH Fusion Hybrids: Potentially Effective Catalytic Bioscavengers against Organophosphorus Nerve Agent Analogs

  • Lee, Nari;Yun, Hyeongseok;Lee, Chan;Lee, Yikjae;Kim, Euna;Kim, Sumi;Jeon, Hyoeun;Yu, Chiho;Rho, Jaerang
    • Journal of Microbiology and Biotechnology
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    • v.31 no.1
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    • pp.144-153
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    • 2021
  • Organophosphorus nerve agents (OPNAs), including both G- and V-type nerve agents such as sarin, soman, tabun and VX, are extremely neurotoxic organophosphorus compounds. Catalytic bioscavengers capable of hydrolyzing OPNAs are under development because of the low protective effects and adverse side effects of chemical antidotes to OPNA poisoning. However, these bioscavengers have certain limitations for practical application, including low catalytic activity and narrow specificity. In this study, we generated a fusion-hybrid form of engineered recombinant human paraoxonase 1 (rePON1) and bacterial organophosphorus hydrolase (OPH), referred to as GV-hybrids, using a flexible linker to develop more promising catalytic bioscavengers against a broad range of OPNAs. These GV-hybrids were able to synergistically hydrolyze both G-type OPNA analogs (paraoxon: 1.7 ~ 193.7-fold, p-nitrophenyl diphenyl phosphate (PNPDPP): 2.3 ~ 33.0-fold and diisopropyl fluorophosphates (DFP): 1.4 ~ 22.8-fold) and V-type OPNA analogs (demeton-S-methyl (DSM): 1.9 ~ 34.6-fold and malathion: 1.1 ~ 4.2-fold above) better than their individual enzyme forms. Among the GV-hybrid clones, the GV7 clone showed remarkable improvements in the catalytic activity toward both G-type OPNA analogs (kcat/Km (106 M-1 min-1): 59.8 ± 0.06 (paraoxon), 5.2 ± 0.02 (PNPDPP) and 47.0 ± 6.0 (DFP)) and V-type OPNA analogs (kcat/Km (M-1 min-1): 504.3 ± 48.5 (DSM) and 1324.0 ± 47.5 (malathion)). In conclusion, we developed GV-hybrid forms of rePON1 and bacterial OPH mutants as effective and suitable catalytic bioscavengers to hydrolyze a broad range of OPNA analogs.

Conversion of water-insoluble components of the basidiocarps of ganoderma lucidum to water-soluble components by hydrolyzing with chitinase

  • Cheong, Jae-Yeon;Park, Won-Bong
    • Archives of Pharmacal Research
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    • v.19 no.4
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    • pp.326-334
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    • 1996
  • We investigated the optimum conditions for conversion of water-insoluble components of basidiocarps of Ganoderma lucidum to water-soluble components by hydrolyzing with chitinase. We also tried it with Ganoderma luciclum residue remaining after extracting hot water-soluble components of Ganoderma lucidum. After hydrolyzing under optimum conditions (20 ppm chitinase, 2% Ganoderma lucidum or 6% Ganoderma lucidum residue, at pH 3 and at $ 35^{\circ}C$), the contents of total water-soluble components (polysaccharide or protein) were measured, and it was found that the contents of water-soluble components increased to 1.5-2.7 fold. Michaelis constant, $K_m$ and maximum rate, $V_max$ calculated by Lineweaver-Burk plot for hydrolysis of Ganoderma lucidum were 1.75% and 0.02%/min respectively and those for hydrolysis of Ganoderma lucidum residue were 53.15% and 0.53%/min respectively The protein-bound polysaccharide was isolated after hydrolysis and molecular weights were measured by Sepharose CL-4B gel filtration and compared with the molecular weights of polysaccharide before hydrolysis.

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Isolation of an Aromatic Polyhydroxyalkanoates-degrading Bacterium

  • JU, HE-SUG;JUNGHO KIM;HOON KIM
    • Journal of Microbiology and Biotechnology
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    • v.8 no.5
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    • pp.540-542
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    • 1998
  • Five microorganisms capable of degrading an aromatic medium-chain-length polyhydroxyalkanoate ($PHA_{MCL}$), poly(3-hydroxy-5-phenylvalerate) (PHPV), were isolated from wastewater-treatment sludge. Among the isolates, JS02 showed degrading activity consistantly during several transfers. The isolate JS02 could hydrolyze another aromatic MCL copolyester, poly(3-hydroxy-5-phenoxyvalerate-co-3-hydroxy-7-phenoxyheptanoate), [P(5POHV-co-7POHH)], and other short-chain-length PHAs ($PHA_{SCL}) such as poly(3-hydroxybutyrate) [P3(HB)], poly(3-hydroxybutyrate-co-4-hydroxybutyrate) [P(3 HB-co-4 HB)], and poly(3-hydroxybutyrate-co-3-hydroxyvalerate) [P(3HB-co-3HV)] with relatively low activity. The culture supernatant of JS02 showed hydrolyzing activity for the p-nitrophenyl esters of fatty acids.

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Studies on Fungi Isolated from Dermatomycoses Patients in Egypt

  • El-Said, A.H.M.
    • Mycobiology
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    • v.30 no.3
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    • pp.154-159
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    • 2002
  • Fifty cases of dermatomycoses were recorded from adult male and female at Qena Gvernorates. These included tinea capitis(62% of total cases), tinea corporis(20%), tinea versicolor(12%) and tinea unguium(6%). Males are more susceptible to all cases of tinea than females. Thirty-one species and 2 varieties belonging to 16 genera were recovered from several infection sites. These were identified as Aphanoascus fulvescens, A. terreus, Arthroderma fulva, A. obtusa, Trichophyton rubrum and T. soudanense. Several saprophytes were also found. These were : Aspergillus flavus, A. fumigatus, A. niger, A. terreus, Cochliobolus lunatus, Mycosphaerella tassiana, Penicillium chrysogenum and P. citrinum. Twenty-one isolates were able to hydrolyze gelatin with variable capabilities. T. rubrum was the most active protease producer. The maximum production of protease was obtained at 8 days of incubation at $30^{\circ}C$ in Sabouraud's basal medium with maltose as a carbon source and pepton as a nitrogen source. The optinal pH for the maximum production of protease was pH 6.