• Title/Summary/Keyword: helix F

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Fundamental Studies on the Landscape Use of Evergreen Ground Cover Plants in KANG WON Area -Propagation, Shade Tolerance, Cold Resistance, and Growth Rate (강원도 지역에서의 상록지피식물의 조경적 이용에 관한 기초적 연구(I) -증식, 내음성, 내한성, 생육량의 차이에 관하여)

  • 홍종운;이기철;허범람;원경렬;임병춘
    • Asian Journal of Turfgrass Science
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    • v.7 no.1
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    • pp.19-30
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    • 1993
  • Experiments were conducted to investigate propagation, shade tolerance, cold resistance and growth rate of evergreen ground cover plants ; Vinca minor K , Ajuga reptans L., Ophiopogon japonicus ker. f nanus hort , and Hedera helix.. The results were as follows : 1.It is convenient to use the growing case for rice seed to grow and transplant Vinca minor seed-ling. The most proper density of transplanting Vinea was 180 plants per 1m$^2$. At the end of growing season, the coverage came up to 90% The rooting ability of Hedera helix was best to cut from April to May (temperature 15~23˚C). The seedling length of Parthenocissus quinguefohlia were irregular and ranged from 5 cm of 200cm. 2. Ajuga reptans L., Ophiopogon j. and Vinca minor L. grew better under 50% light intensity than full sunlight. Particularly, under full sunlight and aestival high temperature, there were a few withering plants in Ajuga reptans L. , and V Vilica minor L. 3. Of Vinca minor K., Ajuga reptans L. , Ophiopogon japonicus ker. f. nanus hort. and Hedera helix. acclimatized in open field, where temperature was from -7~8˚C. There were few plants had damage in low temperature incubator to -16˚C after field acclimatization. 4.Tendrils of Parthenocissus quinguefolia strongly clung to the wire netting stone fence but intruded into the gap and cranny of the precast concrete fence and so clung to, so that it needed to install the bending net on the precast concrete fence.

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ASCL2 Gene Expression Analysis and Its Association with Carcass Traits in Pigs

  • Cheng, H.C.;Zhang, F.W.;Deng, C.Y.;Jiang, C.D.;Xiong, Y.Z.;Li, F.E.;Lei, M.G.
    • Asian-Australasian Journal of Animal Sciences
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    • v.20 no.10
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    • pp.1485-1489
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    • 2007
  • Achaete-scute like 2 (ASCL2) gene encodes a member of the basic helix-loop-helix transcription factor which is essential for the maintenance of proliferating trophoblasts during placental development. ASCL2 gene preferentially expresses the maternal allele in the mouse. However, it escapes genomic imprinting in the human. In this study, the complete open reading frame consisting of 193 amino acids of ASCL2 gene was obtained. Sequence analysis indicated that a C-G mutation existed in the 3' region between Meishan and Large White pigs. The polymorphism was used to determine the monoallelic or biallelic expression with RT-PCR-RFLP in pigs of Large $White{\times}Meishan$ $F_1$ hybrids. Imprinting analysis indicated that the ASCL2 gene expression was biallelic in all the tested tissues (heart, liver, spleen, lung, kidney, stomach, small intestine, skeletal muscle, fat, uterus, ovary and pituitary). PCR-RFLP was used to detect the polymorphism in 270 pigs of the "$Large\;White{\times}Meishan$" $F_2$ resource population. The statistical results showed highly significant associations of the genotypes and fat meat percentage (FMP), lean meat percentage (LMP) and ratio of lean to fat (RLF) (p<0.01), and significant associations of the genotypes and loin eye area (LEA) and internal fat rate (IFR) (p<0.05).

A Study On the Machinability of Steels by Drilling (드릴가공에서 강재의 피삭성에 관한 연구)

  • 김남훈
    • Journal of the Korean Society of Manufacturing Technology Engineers
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    • v.5 no.4
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    • pp.98-107
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    • 1996
  • In order to predict analytically torque, thrust force, tool life and chip formation in drilling, cutting models for chisel edge with various tool-chip contact length were developed in this type. Also, the experimental tests are run with various pilot holes. The following conclusions were obtained from the analysis. \circled1 It's also found experimentally that thrust force(Fz) decreases as pilot hole diameter increases. \circled2 Surface roughness for material(G) is larger that for material(J). The difference over two materials in roughness value about 0.5$mu extrm{m}$. \circled3 Flank wear of the drill in cutting material of G less than any other kinds of materials(F, G, H, I, J). \circled4 In drilling a deep hole on a workpiece over SM45C either twist drill. The chip was conical helix type at the fist suspensely change the two segment type and than two a long pitch helix style.

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The fluctuation and the rigidity study of F-actin filaments in a confined space

  • Park, Myung-Chul;Youli Li;Cyrus R. Safinya;Kim, Mahn-Won
    • Proceedings of the Korean Biophysical Society Conference
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    • 2003.06a
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    • pp.67-67
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    • 2003
  • Filamentous actin (F-actin) is a two stranded long helix that performs structural function in eukaryotic cells. F-actin had been assembled from Alexa-labeled G-actin and had been confined in microchannel. The fluctuation of single filaments was observed by fluorescence optical microscopy. We measured Tangent-tangent Correlation Function G(s) (where s is the distance along the contour of the chain), which tells us the confining wall effect of wormlike semi-flexible polymers as well as the flexural rigidity, such as persistence length.

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Photochemistry of pharaonis phoborhodopsin and its interaction with the transducer

  • Kamo, Naoki;Shimono, Kazumi;Iwamoto, Masayuki;Sudo, Yuki;Yoshida, Hideaki
    • Journal of Photoscience
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    • v.9 no.2
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    • pp.102-105
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    • 2002
  • Phoborhodopsin (pR or sensory rhodopsin II, sRII; the absorption maximum of ∼ 500 nm) is a retinoid protein and works as a photoreceptor of the negative phototaxis of Halobacterium salinarum. pharaonis phoborhodopsin (ppR or pharaonis sensory rhodopsin II, psRII) is a corresponding protein of Natronobacterium pharaonis. These sensory proteins form a complex with a cognate transducer protein in the membrane, and this complex transmits the light-signal to the cytoplasm to evoke avoidance reaction from blue-green light. Recently, the functional expression in Escherichia coli membrane of ppR was achieved, which can afford a large amount of the protein and enables mutant studies to clarify the role of various amino acid residues. A truncated transducer which can bind to ppR is also expressed in Escherichia. coli membrane. In this article, we will review properties of ppR mainly using observations of our laboratory; which contains photochemistry (photocycle), light-driven proton uptake, release and transport, F -helix titling during photocycle and association of the transducer.

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Backbone NMR Assignments of a Putative p53-binding Domain of the Mitochondrial Hsp40, Tid1

  • Jo, Ku-Sung;Sim, Dae-Won;Kim, Eun-Hee;Kang, Dong-Hoon;Ma, Yu-Bin;Kim, Ji-Hun;Won, Hyung-Sik
    • Journal of the Korean Magnetic Resonance Society
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    • v.22 no.3
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    • pp.64-70
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    • 2018
  • Human Tid1, belonging to the family of the Hsp40/DnaJ, functions as a co-chaperone of cytosolic and mitochondrial Hsp70 proteins. In addition, the conserved J-domain and G/F-rich region of Tid1 has been suggested to interact with the p53 tumor suppressor protein, to translocate it to the mitochondria. Here, backbone NMR assignments were achieved for the putative p53-binding domain of Tid1. The obtained chemical shift information identified five ${\alpha}$-helices including four helices characteristic of J-domain, which are connected to a short ${\alpha}$-helix in the G/F-rich region via a flexible loop region. We expect that this structural information would contribute to our progressing studies to elucidate atomic structure and molecular interaction of the domain with p53.

Putative Histone H2A Genes from a Red Alga, Griffithsia japonica

  • Lee, Yoo-Kyung;Lee, Hong-Kum
    • ALGAE
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    • v.18 no.3
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    • pp.191-197
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    • 2003
  • Histones are important proteins that interact with the DNA double helix to form nucleosome. Two putative histone genes, GjH2A-1 and GjH2A-2 were isolated from a red alga Griffithsia japonica. The putative open reading frame of GjH2A-1 and GjH2A-2 shared high similarity with the previously reported amino acid sequences of histone H2As. They have a motif consisting of seven amino acids A-G-L-Q-F-P-V, which matches the histone H2A motif [AC]-G-L-x-F-P-V. Phylogenetic trees were constructed from amino acid sequences of 38 histone H2As. The histone H2As were divided into two groups: major H2As and H2A.F/Z variants. The major histone H2A group consisted of animals, fungi, plants + green algae, and red algae H2A subgroups. The animal histone H2A subgroup was divided into vertebrates, echinoderms, nematodes, insects, and segmented worms H2As. The putative red algal histone genes, GjH2A-1 and GjH2A-2, constituted an independent lineage. This is the first report on red algal histone genes.

The Role of Residues 103, 104, and 278 in the Activity of SMG1 Lipase from Malassezia globosa: A Site-Directed Mutagenesis Study

  • Lan, Dongming;Wang, Qian;Popowicz, Grzegorz Maria;Yang, Bo;Tang, Qingyun;Wang, Yonghua
    • Journal of Microbiology and Biotechnology
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    • v.25 no.11
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    • pp.1827-1834
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    • 2015
  • The SMG1 lipase from Malassezia globosa is a newly found mono- and diacylglycerol (DAG) lipase that has a unique lid in the loop conformation that differs from the common alpha-helix lid. In the present study, we characterized the contribution of three residues, L103 and F104 in the lid and F278 in the rim of the binding site groove, on the function of SMG1 lipase. Site-directed mutagenesis was conducted at these sites, and each of the mutants was expressed in the yeast Pichia pastoris, purified, and characterized for their activity toward DAG and p-nitrophenol (pNP) ester. Compared with wild-type SMG1, F278A retained approximately 78% of its activity toward DAG, but only 11% activity toward pNP octanoate (pNP-C8). L103G increased its activity on pNP-C8 by approximately 2-fold, whereas F104G showed an approximate 40% decrease in pNP-C8 activity, and they both showed decreased activity on the DAG emulsion. The deletion of 103-104 retained approximately 30% of its activity toward the DAG emulsion, with an almost complete loss of pNP-C8 activity. The deletion of 103-104 showed a weaker penetration ability to a soybean phosphocholine monolayer than wild-type SMG1. Based on the modulation of the specificity and activity observed, a pNP-C8 binding model for the ester (pNP-C8, N102, and F278 form a flexible bridge) and a specific lipid-anchoring mechanism for DAG (L103 and F104 serve as "anchors" to the lipid interface) were proposed.

Development of Screw-Type Handy Earth Auger for an Improved Digging Efficiency(I) - Design and Manufacture - (토양굴취력이 향상된 스크류형 경량 식혈기 개발(I) - 설계 및 제작 -)

  • Kim, Jin Hyun;Lee, Jae Hyun;Kim, Ki Dong;Ko, Chi Woong;Kim, Dong Geun
    • Journal of agriculture & life science
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    • v.50 no.3
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    • pp.31-41
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    • 2016
  • This study was conducted to develop a handy earth auger for use in sloppy and rugged forest terrains in order to reduce labor cost which comprises a major part of the production costs in forest afforestation projects. The first prototype is developed consist of two parts, the soil-digging screw and the battery power source. The specifications of the first prototype screw are: length of 170mm, a top diameter of 60mm, bottom diameter of 47mm, 23° angle for each helix, and a 50mm awl-head tip. The use of a single line of screw was selected for reduced weight. In addition, a power source of rotary DC Motor(WD-6G2425, WONILL, Korea) with a maximum torque of 30kgf-cm, rotation of 20-30rpm, K6G30C decelerator with a reduction ratio of 30:1 which could be used with no load for 48 was operated. In consideration of its weight, a lithium battery was utilized in line with the goal of developing a lightweight auger. In order to evaluate the performance of the first prototype, test sites were selected as 6 areas. The rotational force was found to be highest in area A(Solid area), followed by areas F(Mounted slope 40° area) and E(Mounted slope 30° area). It was also observed that in general, the rotational force increased along with the increase in soil depth with the maximum rotational force recorded at 10cm.

In Vitro Evolution of Lipase B from Candida antarctica Using Surface Display in Hansenula polymorpha

  • Kim, So-Young;Sohn, Jung-Hoon;Pyun, Yu-Ryang;Yang, In-Seok;Kim, Kyung-Hyun;Choi, Eui-Sung
    • Journal of Microbiology and Biotechnology
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    • v.17 no.8
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    • pp.1308-1315
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    • 2007
  • Lipase B from Candida antarctica (CalB) displayed on the cell surface of H. polymorpha has been functionally improved for catalytic activity by molecular evolution. CalB was displayed on the cell surface by fusing to a cell-wall anchor motif (CwpF). A library of CalB mutants was constructed by in vivo recombination in H. polymorpha. Several mutants with increased whole-cell CalB activity were acquired from screening seven thousand transformants. The two independent mutants CalB 10 and CalB 14 showed an approximately 5 times greater whole-cell activity than the wild-type. When these mutants were made as a soluble form, CalB 10 showed 6 times greater activity and CalB 14 showed an 11 times greater activity compared with the wild-type. Sequence analyses of mutant CALB genes revealed amino acid substitutions of $Leu^{278}Pro$ in CalB10 and $Leu^{278}Pro/Leu^{219}Gln$ in CalB14. The substituted $Pro^{278}$ in both mutants was located near the proline site of the ${\alpha}$10 helix. This mutation was assumed to induce a conformational change in the ${\alpha}$10 helix and increased the $k_{cat}$ value of mutant CalB approximately 6 times. Site-directed mutagenized CalB, LQ ($Leu^{219}Gln$) was secreted into the culture supernatant at an amount of approximately 3 times more without an increase in the CalB transcript level, compared with the wild-type.