• Title/Summary/Keyword: ecosystem database

Search Result 90, Processing Time 0.019 seconds

Technological status of Biocluster in Daedeok Innopolis: With the focused on the patent analysis (대덕 바이오클러스터의 기술현황: 특허 분석을 중심으로)

  • Kim, Yoon-Dong;Choi, Jong-In
    • Journal of Technology Innovation
    • /
    • v.16 no.1
    • /
    • pp.215-237
    • /
    • 2008
  • KIPRIS patent database was analyzed for identifying the technological status of Daedeok Innopolis Biocluster. It was found that the pattern of activities among various technological areas in Daedeok Biocluster is similar to that of an advanced country rather than those of other cities in Korea. The technological growth in Daedeok Innopolis Biocluster is in the progressive stage, which may be due to the innovative activities rather than the rise in the number of new firms or institutes. The concentration of technology in Daedeok Innopolis Biocluster is a favorable condition for the innovation activities. The trend for the technological concentration was remarkably consistent with the growth curve that a population increases according to the logistic equation. The logistic growth may be represented by the result of competition due to the limited resource allocation and then innovation cluster is corresponding to the ecosystem composed by biological individuals. There is strong competition in Daedeok Innopolis Biocluster in around 2009, so the government might make a policy to encourage the technological diversity for healthy knowledge ecosystem.

  • PDF

PCR of Gut Contents for a Food Web Study of a Marine Ecosystem

  • Kim, Nack-Keun;Kim, Kyoung-Sun;Kim, Hyun-Woo
    • Fisheries and Aquatic Sciences
    • /
    • v.10 no.4
    • /
    • pp.179-185
    • /
    • 2007
  • Understanding dietary habits is one of the most important factors in studying food webs and other ecological processes. Here we designed universal primers to amplify portions of the 18S and 28S rDNA sequences to examine gut contents using PCR techniques. The gut contents of sailfin sandfish (Arctoscopus japonicus) and pacific squid (Todarodes pacificus) were examined. In total, 11 families of prey were identified with 18S and 28S rDNA using the universal primers. The DNA sequence data indicated that the primer sets successfully amplified a wide spectrum of species and represented gut contents in a relatively convenient way. We found that information in the NCBI database was not yet sufficient to discriminate the species we isolated. In addition, technology for the separation of heterogeneous PCR products and better resolution and quantification protocols would help increase data accuracy.

Design of Distributed Hadoop Full Stack Platform for Big Data Collection and Processing (빅데이터 수집 처리를 위한 분산 하둡 풀스택 플랫폼의 설계)

  • Lee, Myeong-Ho
    • Journal of the Korea Convergence Society
    • /
    • v.12 no.7
    • /
    • pp.45-51
    • /
    • 2021
  • In accordance with the rapid non-face-to-face environment and mobile first strategy, the explosive increase and creation of many structured/unstructured data every year demands new decision making and services using big data in all fields. However, there have been few reference cases of using the Hadoop Ecosystem, which uses the rapidly increasing big data every year to collect and load big data into a standard platform that can be applied in a practical environment, and then store and process well-established big data in a relational database. Therefore, in this study, after collecting unstructured data searched by keywords from social network services based on Hadoop 2.0 through three virtual machine servers in the Spring Framework environment, the collected unstructured data is loaded into Hadoop Distributed File System and HBase based on the loaded unstructured data, it was designed and implemented to store standardized big data in a relational database using a morpheme analyzer. In the future, research on clustering and classification and analysis using machine learning using Hive or Mahout for deep data analysis should be continued.

Ecoclimatic Map over North-East Asia Using SPOT/VEGETATION 10-day Synthesis Data (SPOT/VEGETATION NDVI 자료를 이용한 동북아시아의 생태기후지도)

  • Park Youn-Young;Han Kyung-Soo
    • Korean Journal of Agricultural and Forest Meteorology
    • /
    • v.8 no.2
    • /
    • pp.86-96
    • /
    • 2006
  • Ecoclimap-1, a new complete surface parameter global database at a 1-km resolution, was previously presented. It is intended to be used to initialize the soil-vegetation- atmosphere transfer schemes in meteorological and climate models. Surface parameters in the Ecoclimap-1 database are provided in the form of a per-class value by an ecoclimatic base map from a simple merging of land cover and climate maps. The principal objective of this ecoclimatic map is to consider intra-class variability of life cycle that the usual land cover map cannot describe. Although the ecoclimatic map considering land cover and climate is used, the intra-class variability was still too high inside some classes. In this study, a new strategy is defined; the idea is to use the information contained in S10 NDVI SPOT/VEGETATION profiles to split a land cover into more homogeneous sub-classes. This utilizes an intra-class unsupervised sub-clustering methodology instead of simple merging. This study was performed to provide a new ecolimatic map over Northeast Asia in the framework of Ecoclimap-2 global database construction for surface parameters. We used the University of Maryland's 1km Global Land Cover Database (UMD) and a climate map to determine the initial number of clusters for intra-class sub-clustering. An unsupervised classification process using six years of NDVI profiles allows the discrimination of different behavior for each land cover class. We checked the spatial coherence of the classes and, if necessary, carried out an aggregation step of the clusters having a similar NDVI time series profile. From the mapping system, 29 ecosystems resulted for the study area. In terms of climate-related studies, this new ecosystem map may be useful as a base map to construct an Ecoclimap-2 database and to improve the surface climatology quality in the climate model.

A Study of the Development of Wetland Database for the Nakdong River Estuary using GIS and RS (GIS와 원격탐사를 이용한 낙동강 하구 습지 데이터베이스 구축에 관한 연구)

  • Yi, Gi-Chul;Yoon, Hae-Soon;Kim, Seung-Hwan;Nam, Chun-Hee;Ok, Jin-A
    • Journal of the Korean Association of Geographic Information Studies
    • /
    • v.2 no.3
    • /
    • pp.1-15
    • /
    • 1999
  • This study was carried out to find out the way to build a comprehensive wetland ecosystem database using the technique of remote sensing and geographic information system. A Landsat TM image taken in May 17, 1997 was used for the primary source for the image analysis. Field surveys were conducted March to September of 1998 to help image analysis and examine the results. An actual wetland vegetation map was created based on the field survey. A Landsat TM image was analyzed by unsupervised and supervised classification methods and finally categorized into such 5 classes as Phragmites australis community, mixed community, sand beach, Scirpus trigueter community and non-vegetation intertidal area. Wetland basemap was developed for the overall accuracy assesment in wetland mapping. Vegetation index map of wetland vegetation was developed using NDVI(normalized difference vegetation index). The map of wetland productivity was developed based on the productivity of Phragmites australis and the relationship to the proximity of adjacent water bodies. The map of potential vegetation succession map was also developed based on the experience and knowledge of the field biologists. Considering these results, it is possible to use the remote sensing and GIS techniques for producing wetland ecosystem database. This study indicated that these techniques are very effective for the development of the national wetland inventory in Korea.

  • PDF

Current Status of Mammal Fauna on Jindo Island, Korea

  • Oh, Hong Shik;Park, Seon Mi;Kim, Yoo Kyung;Han, Sang Hyun;Lee, Hwa Jin;Ha, Jeong Wook
    • Animal Systematics, Evolution and Diversity
    • /
    • no.spc9
    • /
    • pp.73-79
    • /
    • 2016
  • In the present study, to explore the current status of mammals that inhabit Jindo Island, Jeollanam-do, South Korea, a survey was conducted from July 6 to July 9, 2016. Using several survey methods, such as Sherman's live trap, footprint, caves, excretions, and road-kill investigations, the mammals observed on Jindo Island were found to be from 5 orders and 9 families, including 12 species in total. Among them, three species of small mammals were Mogera wogura, Crocidura shantungensis, and Apodemus agrarius. Additionally, two legally protected species were found through excretion observations. Lutra lutra and Prionailurus bengalensis, which were designated to endangered wild animal classes I and II, respectively. The survey results can be used as a valuable resource for identifying the distribution and habitat status of mammals in the Jindo-gun area, as well as for building a database for ecosystem preservation.

Improvement of the EIA for Land Reclamation Projects in the Coastal Areas of Korea (해양매립사업 환경영향평가의 개선방안)

  • Jang, Ju-Hyoung;Eom, Ki-Hyuk;Kwon, Kee-Young;Hong, Sok-Jin;Park, Jae-Hyeon;Kim, Gui-Young
    • Journal of Environmental Science International
    • /
    • v.16 no.7
    • /
    • pp.847-853
    • /
    • 2007
  • In Korean coastal areas, land reclamations are main development projects that should be based on environmental impact assessment(EIA), because those human interventions can change coastlines, damage tidal flats, and pollute adjacent areas to threat seafood safety and devaluate overall ecosystem service value. Existing procedures of the EIA for land reclamation projects were diagnosed and evaluated to enhance them. Problems were identified in the designation of survey areas, the consistency in survey sites and periods, the standardization of survey methods and reports, the confidence of survey results and the verification of predictions. Lack of integration was noticeable and could be improved by synthesizing different assessments from topography geography, marine physics, marine chemistry and marine biology. We suggest that successful precautionary marine environment management requires readjusting the cost of EIA, recruiting experts in marine environment, constructing database and establishing specialized assessment system.

Genotype and Phenotype of Echinococcus granulosus Derived from Wild Sheep (Ovis orientalis) in Iran

  • Eslami, Ali;Meshgi, Behnam;Jalousian, Fatemeh;Rahmani, Shima;Salari, Mohammad Ali
    • Parasites, Hosts and Diseases
    • /
    • v.54 no.1
    • /
    • pp.55-60
    • /
    • 2016
  • The aim of the present study is to determine the characteristics of genotype and phenotype of Echinococcus granulosus derived from wild sheep and to compare them with the strains of E. granulosus sensu stricto (sheep-dog) and E. granulosus camel strain (camel-dog) in Iran. In Khojir National Park, near Tehran, Iran, a fertile hydatid cyst was recently found in the liver of a dead wild sheep (Ovis orientalis). The number of protoscolices (n=6,000) proved enough for an experimental infection in a dog. The characteristics of large and small hooks of metacestode were statistically determined as the sensu stricto strain but not the camel strain (P=0.5). To determine E. granulosus genotype, 20 adult worms of this type were collected from the infected dog. The second internal transcribed spacer (ITS2) of the nuclear ribosomal DNA (rDNA) and cytochrome c oxidase 1 subunit (COX1) of the mitochondrial DNA were amplified from individual adult worm by PCR. Subsequently, the PCR product was sequenced by Sanger method. The lengths of ITS2 and COX1 sequences were 378 and 857 bp, respectively, for all the sequenced samples. The amplified DNA sequences from both ribosomal and mitochondrial genes were highly similar (99% and 98%, respectively) to that of the ovine strain in the GenBank database. The results of the present study indicate that the morpho-molecular features and characteristics of E. granulosus in the Iranian wild sheep are the same as those of the sheep-dog E. granulosus sensu stricto strain.

Development of GIS Based Wetland Inventory and Its Use (GIS에 기반한 습지목록의 제작과 활용)

  • Yi, Gi-Chul;Lee, Jae-Won;Kim, Yong-Suk
    • Journal of the Korean Association of Geographic Information Studies
    • /
    • v.13 no.1
    • /
    • pp.50-61
    • /
    • 2010
  • This study was carried out to find out the way to build a comprehensive wetland ecosystem database using the technique of remote sensing and Geographic Information System. A Landsat TM image (taken in Oct. 30, 2002), Kompsat-2 images (Jan. 17, 2008 & Nov. 20, 2008), LiDAR(Mar. 1, 2009) were used for the primary source for the image analysis. Field surveys were conducted March to August of 2009 to help image analysis and examine the results. An actual wetland vegetation map was created based on the field survey. Satellite images were analyzed by unsupervised and supervised classification methods and finally categorized into such classes as Phragmites australis community, mixed community, sand beach, Scirpus planiculmis community and non-vegetation intertidal area. The map of wetland productivity was developed based on the productivity of Phragmites australis and the relationship to the proximity of adjacent water bodies. The developed 3 dimensional wetland map showed such several potential applications as flood inundation, birds flyway viewsheds and benthos distribution. Considering these results, we concluded that it is possible to use the remote sensing and GIS techniques for producing wetland ecosystem spatial database and these techniques are very effective for the development of the national wetland inventory in Korea.

Standardization of KoFlux Eddy-Covariance Data Processing (KoFlux 에디 공분산 자료 처리의 표준화)

  • Hong, Jin-Kyu;Kwon, Hyo-Jung;Lim, Jong-Hwan;Byun, Young-Hwa;Lee, Jo-Han;Kim, Joon
    • Korean Journal of Agricultural and Forest Meteorology
    • /
    • v.11 no.1
    • /
    • pp.19-26
    • /
    • 2009
  • The standardization of eddy-covariance data processing is essential for the analysis and synthesis of vast amount of data being accumulated through continuous observations in various flux measurement networks. End users eventually benefit from the open and transparent standardization protocol by clear understanding of final products such as evapotranspiration and gross primary productivity. In this paper, we briefly introduced KoFlux efforts to standardize data processing methodologies and then estimated uncertainties of surface fluxes due to different processing methods. Based on our scrutiny of the data observed at Gwangneung KoFlux site, net ecosystem exchange and ecosystem respiration were sensitive to the selection of different processing methods. Gross primary production, however, was consistent within errors due to cancellation of the differences in NEE and Re, emphasizing that independent observation of ecosystem respiration is required for accurate estimates of carbon exchange. Nocturnal soil evaporation was small and thus the annually integrated evapotranspiration was not sensitive to the selection of different data processing methods. The implementation of such standardized data processing protocol to AsiaFlux will enable the establishment of consistent database for validation of models of carbon cycle, dynamic vegetation, and land-atmosphere interaction at regional scale.