• Title/Summary/Keyword: cytoplasmic

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Crystal Structure of Hypothetical Fructose-Specific EIIB from Escherichia coli

  • Park, Jimin;Kim, Mi-Sun;Joo, Keehyung;Jhon, Gil-Ja;Berry, Edward A.;Lee, Jooyoung;Shin, Dong Hae
    • Molecules and Cells
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    • v.39 no.6
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    • pp.495-500
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    • 2016
  • We have solved the crystal structure of a predicted fructose-specific enzyme $IIB^{fruc}$ from Escherichia coli ($EcEIIB^{fruc}$) involved in the phosphoenolpyruvate-carbohydrate phosphotransferase system transferring carbohydrates across the cytoplasmic membrane. $EcEIIB^{fruc}$ belongs to a sequence family with more than 5,000 sequence homologues with 25-99% amino-acid sequence identity. It reveals a conventional Rossmann-like ${\alpha}-{\beta}-{\alpha}$ sandwich fold with a unique ${\beta}$-sheet topology. Its C-terminus is longer than its closest relatives and forms an additional ${\beta}$-strand whereas the shorter C-terminus is random coil in the relatives. Interestingly, its core structure is similar to that of enzyme $IIB^{cellobiose}$ from E. coli ($EcIIB^{cel}$) transferring a phosphate moiety. In the active site of the closest $EcEIIB^{fruc}$ homologues, a unique motif CXXGXAHT comprising a P-loop like architecture including a histidine residue is found. The conserved cysteine on this loop may be deprotonated to act as a nucleophile similar to that of $EcIIB^{cel}$. The conserved histidine residue is presumed to bind the negatively charged phosphate. Therefore, we propose that the catalytic mechanism of $EcEIIB^{fruc}$ is similar to that of $EcIIB^{cel}$ transferring phosphoryl moiety to a specific carbohydrate.

Analysis of Phosphorylation of the BRI1/BAK1 Complex in Arabidopsis Reveals Amino Acid Residues Critical for Receptor Formation and Activation of BR Signaling

  • Yun, Hye Sup;Bae, Young Hee;Lee, Yun Ji;Chang, Soo Chul;Kim, Seong-Ki;Li, Jianming;Nam, Kyoung Hee
    • Molecules and Cells
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    • v.27 no.2
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    • pp.183-190
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    • 2009
  • The plasma membrane-localized BRASSINOSTEROID-INSENSITIVE1 (BRI1) and BRI1-ASSOCIATED KINASE1 (BAK1) are a well-known receptor pair involved in brassinosteroids (BR) signaling in Arabidposis. The formation of a receptor complex in response to BRs and the subsequent activation of cytoplasmic domain kinase activity share mechanistic characteristics with animal receptor kinases. Here, we demonstrate that BRI1 and BAK1 are BR-dependently phosphorylated, and that phosphorylated forms of the two proteins persist for different lengths of time. Mutations of either protein abolished phosphorylation of the counterpart protein, implying transphosphorylation of the receptor kinases. To investigate the specific amino acids critical for formation of the receptor complex and activation of BAK1 kinase activity, we expressed several versions of BAK1 in yeast and plants. L32E and L46E substitutions resulted in a loss of binding of BAK1 to BRI1, and threonine T455 was essential for the kinase activity of BAK1 in yeast. Transgenic bri1 mutant plants overexpressing BAK1(L46E) displayed reduced apical dominance and seed development. In addition, transgenic wild type plants overexpressing BAK1(T455A) lost the phosphorylation activity normally exhibited in response to BL, leading to semi-dwarfism. These results suggest that BAK1 is a critical component regulating the duration of BR efficacy, even though it cannot directly bind BRs in plants.

Hyphal growth, auxiliary cell development and hyphal healing process of arbuscular mycorrhizal fungi, Gigaspora and Scutellospora genera (Gigaspora 속(屬)과 Scutellospora 속(屬) 아버스큘 균근균(菌根菌)의 균사생장(菌絲生長), 보조세포 발달(發達), 손상된 균사재생(菌絲再生)의 과정(過程))

  • Ka, Kang-Hyeon;Koo, Chang-Duck;Yi, Chang-Keun
    • The Korean Journal of Mycology
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    • v.22 no.1
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    • pp.36-45
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    • 1994
  • Hyphal growth, auxiliary cell development and hyphal healing process of Gigaspora margarita, Scutellospora heterogama and S. verrucosa were investigated. The germinated hyphae from spores grew on the surface and the bottom of agar media. The hyphal growth on the surface stopped 19 to 23 days and the growth on the bottom 40 to 51 days after spore germination. Auxiliary cells began to develop 7 to 9 days after the spore germination in the media. The auxiliary cells almost always developed on the tip of a hypha branched from a secondary hypha. The cytoplasmic streaming rates in the hyphae of G. margarita and S. heterogama were $2.7\;to\;3.3\;{\mu}m/s\;and\;3.8\;to\;4.3\;{\mu}m/s$, respectively. The hyphae artificially cut were healed by connecting with a hypha grown from the spore-side hypha. We may suggest that the wound healing process of hyphae should be one of the characteristics obtained from symbiotic relationship between host plants and arbuscular mycorrhizal fungi for a long period of time.

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Effects of Rubus coreanus Miquel on the Expressions of Tyrosinase, TRP-1 and TRP-2 in B16 Melanoma Cells (복분자가 B16 세포주의 Tyrosinase, TRP-1 and TRP-2 발현에 미치는 영향)

  • Oh, Se-Mi;Mun, Yeun-Ja;Woo, Won-Hong
    • Journal of Physiology & Pathology in Korean Medicine
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    • v.21 no.6
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    • pp.1456-1461
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    • 2007
  • Melanogenesis is induced mainly by ultraviolet radiation of sunlight and ${\alpha}-melanocyte$-stimulating hormone (${\alpha}-MSH$) which binds to a specific G protein coupled receptor. The purpose of this study was to investigate the mechanism of melanogenesis inhibition in B16/F10 cells by methanol extract of Rubus coreanus Miquel (RCM). In the present study, ${\alpha}-MSH$ and forskolin led to a stimulation of melanin synthesis that appeared to result from an increased tyrosinase activity and melanin content. However, RCM inhibited the ${\alpha}-MSH$- and forskolin-induced melanin synthesis. In addition, RCM abolished the ${\alpha}-MSH$- and forskolin-induced cytoplasmic dendricity. Regarding protein levels of the melanogenic enzymes, the amounts of tyrosinase and tyrosinase-related protein 1 (TRP-1) were increased after incubation with α-MSH and forskolin. The treatment of RCM decreased the ${\alpha}-MSH$- and forskolin-induced expression levels of tyrosinase and TRP-1. Based on these findings, it is likely that RCM exerts its depigmenting effects in B16/F10 cells through the suppression of tyrosinase and TRP-1 expression, which are key enzymes for melanogenesis.

CELL-MATRIX ADHESIONS OF SOFT TISSUE CELLS AROUND DENTAL IMPLANTS (임플랜트 주위 연조직세포의 세포-기질 접착)

  • Lee Suk-Won;Rhyu In-Chul;Han Chong-Hyun;Lee Jai-Bong
    • The Journal of Korean Academy of Prosthodontics
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    • v.44 no.1
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    • pp.73-84
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    • 2006
  • The importance of soft tissue response to implant abutments has become one of the major issues in current implant dentistry. To date, numerous studies have emphasized on maintaining connective tissue barriers in quantity, as well as in quality fir the long term success of dental implants. The cells mainly consisting the soft tissue around dental implants are fibroblasts and epithelial cells. The mechanism of the fibroblasts adhesions to certain substrata can be explained by the 'focal adhesion' theory. On the other hand, epithelial cells adhere tn the substratum via hemidesmosomes. The typical integrin-mediated adhesions of cells to certain matrix are called 'cell-matrix adhsions'. The focal adhesion complex of fibroblasts, in relation to the cell-matrix adhsions, consists of the extracellular matrix(ECM) such as fibronectin, the transmembrane proteins such as integrins, the intracellular cytoplasmic proteins such as vinculin, talin, and more, and the cytoskeletal structures such as filamentous actin and microtubules. The mechanosensory function of integrins and focal adhesion complexes are considered to play a major role in the cells adhesion, migration, proliferation, differentiation, division, and even apoptosis. The '3-D matrix adhesions' defined by Cukierman et al. makes a promising future for the verification of the actual process of the cell-matrix adhesions in vivo and can be applied to the field of implant dentistry in relation to obtaining strong soft tissue attachment to the implant abutments.

The Fine Structure of the Sperm Ball and Sperm of Urechis unicinctus and Immunogold Localization of $\alpha-Tubulin$ (개불(Urechis unicinctus) Sperm Ball과 정자의 미세구조와 금 입자 면역 반응에 의한 $\alpha-Tubulin$의 분포)

  • Shin, Kil-Sang
    • Applied Microscopy
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    • v.28 no.2
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    • pp.193-205
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    • 1998
  • The Urechis unicinctus sperm and spermatogenic cells prepared from the testis are investigated to identify $\alpha-tubulin$ of axoneme microtubules using mouse monoclonal $anti-\alpha-tubulin$ as the first Ab and Gold(10nm) conjugated goat anti-mouse IgG as the Ab marker. The Ag-Ab reaction analyzed excellently the localization of $\alpha-tubulin$ and the gold particles incorporated with the proximal and distal centrioles, manchette microtubules, and flagellum. The gold particles can be also observed in the spermatogenic cells while the cells are still in sperm ball which is composed of a somatic cell and spermatogenic cells. The sperm ball is the functional unit of sperm production in U unicinctus testis. The spermatids are developed from the spermatogenic cells in the sperm ball and released into the testis cavity through a cortical cytoplasmic opening. The spermatid architectures are similar with the mature sperm of the testis cavity in aspects of shape of discoid acrosome, degree of nuclear condensation and ring type of mitochondrion. However, the distal centriole connecting with the flagella can be observed from the mature sperm while the both proximal and distal centrioles reveal only in the spermatids. The proximal centriole is directly connected with nuclear outer membrane during the stage of nuclear condensation and oriented perpendicularly to the distal centriole whose axis coinciding with the longitudinal axis of the spermatozoon. There are indications that the distal centriole is intimately associated with the polymerization of the flagellum. The manchette microtubules appear during spermatid development but the mature sperm have round head and no conspicuous middle piece.

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Ultrastructure and Histochemistry on the Integumentary System of the Rockfish, Sebastiscus tertius (Teleostei: Scorpaenidae) (붉은쏨뱅이 (Sebastiscus tertius) 피부계의 미세구조 및 조직화학적 특징)

  • Baek, Jae-Min;Kim, Chul-Won;Lim, Sang-Gu;Lee, Jae-Bong;Lee, Jung-Sick
    • Applied Microscopy
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    • v.34 no.2
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    • pp.83-93
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    • 2004
  • Integumentary structures of the rockfish, Sebastiscus tertius were examined by means of the light and transmission electron microscopy. Stratified epidermal layer consists of supporting cells, unicellular glands, granular cells and mitochondria-rich cells. The epidermal layer could be classified into superficial, intermediate and basal layer by morphology and structure of the supporting cells. Mucous cells of unicellular gland were observed in the superficial and intermediate layer of the epidermis. The mucous materials were identified as acidic and carboxylated mucosubstance by histochemical methods. Club cell has well-developed central vacuole, rough endoplasmic reticula and Golgi complex in the cytoplasm. Granular cells were observed in the superficial layer and contained numerous granules of high electron density. Mitochondria-rich cells are characterized by well-developed microfilaments in cortex and numerous tubular mitochondria in medullar cytoplasm. Three types of pigment cells in the dermal layer could be distinguished with electron density of cytoplasmic inclusions.

Effect of Addition of Granulosa Cells for Oocyte Maturation on Cleavage and Development of Bovine IVF Embryos (체외성숙시 중.대란포의 과립막세포 첨가가 배 발달에 미치는 영향)

  • 공일근;주영국;곽대오;노규진;박충생
    • Journal of Embryo Transfer
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    • v.9 no.1
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    • pp.1-6
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    • 1994
  • This experiment was investigated the effect of presence of granulosa cells from follicles of different size on bovine oocyte maturation, cleavage and development to late stage. The nuclear and cytoplasmic maturation of oocytes in the IVM-IVF system are critical for subsequent embryo development. Granulosa cells when the co-cultured with oocytes may interact with cumulus-oocytes complexes and influence the development competence of the oocytes. Granulosa cells from medium (2~6 mm) and large(>1O mm) size follicles were recovered by aspiration, washed 3 times by centrifugation at 500 x g for 5 min. and used for co-culture at a concentration of 2~3 x 106 cells/mi. The oocytes were matured in vitro (IVM) for 24 hrs. in TCM-199 supplemented with 35 $\mu$g/ml FSH, 10 $\mu$g/ml LH, 1 $\mu$g/ml estradiol-17$\beta$ and granulosa cells at 39$^{\circ}C$ under 5% $CO_2$ in air. They were fertilized in vitro (IVF) by epididymal spermatozoa treated with heparin for 24 hrs., and then the zygotes were co-cultured in vitro (I VC) with bovine oviductal epithelial cells for 7 to 9 days. The assessment of maturation revealed that Grade J oocytes showed significantly(P

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Early Development of Parthenogenetically Activated Porcine Oocyte after In Vitro Maturation for Various Periods (난자성숙시간에 따른 처녀발생유기 돼지난자의 초기발생)

  • Kim, S. B.;Lee, H.;Byun, T. H.;Jeon, J. T.;Lee, S. H.;Song, H. B.
    • Journal of Embryo Transfer
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    • v.9 no.1
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    • pp.117-125
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    • 1994
  • In vitro development of parthenogenetic embryo was examined after ethanol treatment of follicular oocytes matured in vitro for 42, 48, 54 and 60h in the pig. The follicular oocytes were matured in TCM 199 containing 15% FCS and gonadotrophins in an atmosphere of 39 $^{\circ}C$ 5% $CO_2$. The cumulus-free oocytes were activated by 10% ethanol treatment in M2+4mg /ml BSA for 10 min. The ethanol-activated oocytes were washed and further cultured in TCM199+20%FCS containing granulosa cell monolayer. Maturation rates at 42, 48, 54 and 60h of IVM were 75.0, 86.5, 81.6 and 87.9%, respectively. Thus the oocytes maturated in vitro for longer periods did not improve nuclear maturation much. Pronuclear formation rates at 18h post-activation in ethanol-activated oocytes were 21.9, 25.0, 47.4 and 32.6%. The cytoplasmic maturation leading to pronuclear formation upon activation increased when the I VM period was extended from 42 to 54h. When the activated oocytes were cultured for 96~120h to analyse early development of the activated oocytes, the rates of embryonic development upto $\leq$ 5~8 cell were 5.3, 5.8, 12.0 and 11.7% among the cultured embryos. The result indicate that earlier development of activated porcine occyte is dependent on the duration of oocyte maturation, and that better development could be obtained from the oocyte matured for 54h.

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Aspiration Cytology of Pilomatrixoma - Report of 2 Cases Misdiagnosed as Metastatic Carcinoma - (모기질 세포종의 흡인 세포학 - 전이성 암종으로 오진된 2예 보고 -)

  • Koh, Jae-Soo;Ha, Chang-Won;Cho, Kyung-Ja;Jang, Ja-June
    • The Korean Journal of Cytopathology
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    • v.4 no.1
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    • pp.25-29
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    • 1993
  • We describe cytologic findings of two cases of pilomatrixoma which had been cytologically misdiagnosed as suspicious malignant and malignant lesions in 35 year-old and 22 year-old females who presented a palpable neck mass. The cytologic smears showed many basaloid cells with a high nuclear-cytoplasmic ratio, nuclear hyperchromatism and prominent nucleoli, keratinized squamous cells with pyknotic nuclei, foreign body giant cells, and chronic inflammatory cells in necrotic back-ground. Retrospective view of this aspiration smear revealed that these findings were characteristic features of pilomatrixoma, and the evenly distributed chromatin pattern as well as the lack of nuclear pleomorphism were considered to be the differential points from malignant neoplasm. Pilomatrixoma is a benign neoplasm which should be included in differential diagnosis if the fine needle aspiration cytologic smear of a neck mass or subcutaneous mass of any site showed these features.

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