• 제목/요약/키워드: cell library

검색결과 574건 처리시간 0.037초

Inhibitory Mechanism of Novel Inhibitors of UDP-N-Acetylglucosamine Enolpyruvyl Transferase from Haemophilus influenzae

  • Jin, Bong-Suk;Han, Seong-Gu;Lee, Won-Kyu;Ryoo, Sung-Weon;Lee, Sang-Jae;Suh, Se-Won;Yu, Yeon-Gyu
    • Journal of Microbiology and Biotechnology
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    • 제19권12호
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    • pp.1582-1589
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    • 2009
  • Bacterial UDP-N-acetylglucosamine enolpyruvyl transferase (MurA) catalyzes the transfer of enolpyruvate from phosphoenolpyruvate (PEP) to uridine diphospho-N-acetylglucosamine (UNAG), which is the first step of bacterial cell wall synthesis. We identified thimerosal, thiram, and ebselen as effective inhibitors of Haemophilus influenzae MurA by screening a chemical library that consisted of a wide range of bioactive compounds. When MurA was preincubated with these inhibitors, their 50% inhibitory concentrations ($IC_{50}s$) were found to range from 0.1 to $0.7\;{\mu}M$. In particular, thimerosal suppressed the growth of several different Gram-negative bacteria such as Escherichia coli, Pseudomonas aeruginosa, and Salmonella typhimurium at a concentration range of $1-2\;{\mu}g/ml$. These inhibitors covalently modified the cysteine residue near the active site of MurA. This modification changed the open conformation of MurA to a more closed configuration, which may have prevented the necessary conformational change from occurring during the enzyme reaction.

벼 (Oryza sativa L.)배양세포의 고중력유도성 cDNA의 탐색 (Screening of Gravity Inducible cDNAs in Rice(Oryza sativa L.) Cultured Cell)

  • 권순태;김길웅
    • 식물조직배양학회지
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    • 제21권2호
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    • pp.111-115
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    • 1994
  • 벼(Oryza sativa L. cv Nipponbaie)배양세포에 중력 450,000 x g를 처리하여 cDNA library를 만들고, 무처리 및 고중력을 처리한 cDNA 프로브로 스크리닝을 실시하여 고중력에 특이적으로 양성반응을 나타내는 GSC 13 및 GSC124 cDNA를 선발하였다. 선발된 두 유전자 GSC 13 및 GSC 124의 길이는 각각 1.34 및 0.67 kilobase pairs였으며, 배양세포내에서 관련된 transcript의 크기는 각각 2.0 및 1.9 kilobase pairs인 것으로 나타났다. 두 유전자를 프로브로한 Northern hybridization을 실시한 결과 GSC 13, GSC 124 공히 배양세포내에 고중력처리에 의해 특이적으로 축적되는 mRNA가 나타났으며, 중력강도 300,000 x g 에 비해 450,000 x g 처리에서 더욱 강한 축적을 보였고 450,000 x g 4시간 처리에서 최대의 수준을 보였다.

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Cellular Mechanisms of a New Pyrazinone Compound that Induces Apoptosis in SKOV-3 Cells

  • Wang, Guan;Jiang, Meng-Ying;Meng, Ying;Song, Hong-Rui;Shi, Wei
    • Asian Pacific Journal of Cancer Prevention
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    • 제15권2호
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    • pp.797-802
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    • 2014
  • We screened a small molecular library that was designed and independently synthesized in vitro and found a new drug (MY-03-01) that is active against ovarian cancer. We established that MY-03-01 effectively inhibited SKOV-3 cell survival in a dose-dependent manner, based on cell viability rates, and that it not only induced SKOV-3 apoptosis by itself, but also did so synergistically with paclitaxel. Secondly, when MY-03-01 was applied at $40{\mu}M$, its hemolytic activity was less than 10%, compared with the control, and there was almost no damage to nor mal cells at this concentration. In addition, we used DAPI staining and flow cytometry to show that MY-03-01 could significantly induce apoptosis of SKOV-3 cells. Finally, we found that MY-03-01 likely induced SKOV-3 apoptosis by activating caspase3 and caspase9 through the mitochondrial pathway.

1,3,4-Thiadiazole 유도체의 합성 및 Akt1 카이네이즈 저해 활성 (Synthesis and Akt1 Kinase Inhibitory Activity of 1,3,4-Thiadiazole Derivatives)

  • 유경호;김세영;류재천
    • 한국응용과학기술학회지
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    • 제25권3호
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    • pp.370-379
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    • 2008
  • Akt, a serine/threonine protein kinase as a viral oncogene, is a critical regulator of PI3K-mediated cell proliferation and survival. On translocation, Akt is phosphorylated and activated, ultimately resulting in stimulation of cell growth and survival. As a part of our program toward the novel Akt1 inhibitors with potent activity over PI3K signaling pathway, we found primary hit compound 2 with an $IC_{50}$ value of $620\mu}M$ from protein kinase focused library. Based on the structural features of 2, new 1,3,4-thiadiazole derivatives were designed by the introduction of aromatic and heteroaromatic moieties onto thiadiazole nucleus. In this work, a series of 1,3,4-thiadiazole derivatives 1a-1 were synthesized and evaluated for Akt1 inhibitory activity.

Constructive Steganography by Tangles

  • Qian, Zhenxing;Pan, Lin;Huang, Nannan;Zhang, Xinpeng
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • 제12권8호
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    • pp.3911-3925
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    • 2018
  • This paper proposes a novel steganography method to hide secret data during the generation of tangle patterns. Different from the traditional steganography based on modifying natural images, we propose to construct stego images according to the secret messages. We first create a model to group a selected image contour, and define some basic operations to generate various pattern cells. During data hiding, we create a cell library to establish the relationships between cells and secret data. By painting the cell inside the image contour, we create a dense tangle pattern to carry secret data. With the proposed method, a recipient can extract the secret data correctly. Experimental results show that the proposed method has a flexible embedding capacity. The constructed stego tangle image has good visual effects, and is secure against adversaries. Meanwhile, the stego tangle pattern is also robust to JPEG compression.

Characterization of HRD3, a Schizosaccharomyces pombe Gene Involved in DNA Repair and Cell Viability

  • Choi, In-Soon
    • Animal cells and systems
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    • 제7권2호
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    • pp.159-164
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    • 2003
  • The RAD3 gene of Saccharomyces cerevisiae is required for excision repair and is essential for cell viability. The RAD3 encoded protein possesses a single stranded DNA-dependent ATPase and DNA and DNA-RNA helicase activities. To examine the extent of conservation of structure and function of a S. pombe RAD3 during eukaryotic evolution, the RAD3 homolog gene was isolated by screening of genomic DNA library. The isolated gene was designated as HRD3 (homolog of RAD3 gene). Southern blot analysis confirmed that S. pombe chromosome contains the same DNA as HRD3 gene and this gene exists as a single copy in S. pombe. The transcript of 2.8 kb was detected by Northern blot analysis, The level of transcripts increased by ultraviolet (UV) irradiation, indicating that HRD3 is one of the UV-inducible genes in S. pombe. Furthermore, the predicted partial sequence of HRD3 protein has 60% identity to S. cerevisiae RAD3 gene. This homology was particularly striking in the regions identified as being conserved in a group of DNA helicases. Gene deletion experiments indicate that the HRD3 gene is essential for viability and DNA repair function. These observations suggest evolutionary conservation of other protein components with which HRD3 might interact in mediating its DNA repair and viability functions.

비트 분할 데이터 시프트 및 다양한 형식 변환이 가능한 데이터 처리기의 VLSI 설계 (VLSI Design of Data Manipulation Unit capable of bit partitioned shifts and various data type conversions)

  • 유재희
    • 한국통신학회논문지
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    • 제27권6C호
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    • pp.594-600
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    • 2002
  • 일반적인 시프트 연산과 더불어, 비트 분할 시프트 및 멀티미디어 데이터의 다양한 형식변환이 가능한 데이터 처리기가 제안되었다. 데이터 형식 변환 연산과 시프트 연산의 유사점을 최대한 이용하여, Barrel 시프터를 변형하여, 약간의 interconnection을 추가함으로써, 최소의 하드웨어로써 두 개의 연산을 통합 처리 가능하도록 하였다. 제안된 데이터 처리기는 크게 일반적인 시프트 연산과 pack 연산을 수행하는 시프터 블록파 unpack 연산 등을 수행하는 블록으로 구성된다. 제안된 데이터 처리기는 Verilog HDL를 사용하여 설계되었으며, Compass 0.6$\mu\textrm{m}$ standard cell library를 사용하여 VLSI 구현된 결과에 대하여 논의된다

시각 셀 OOK 변조 : MIMO CamCom 연구 사례 (Visual Cell OOK Modulation : A Case Study of MIMO CamCom)

  • 레투안남;장영민
    • 한국통신학회논문지
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    • 제38C권9호
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    • pp.781-786
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    • 2013
  • Multiplexing information over parallel data channels based on RF MIMO concept is possible to achieve considerable data rates over large transmission ranges with just a single transmitting element. Visual multiplexing MIMO techniques will send independent streams of bits using the multiple elements of the light transmitter array and recording over a group of camera pixels can further enhance the data rates. The proposed system is a combination of the reliance on computer vision algorithms for tracking and OOK cell frame modulation. LED array are controlled to transmit message in the form of digital information using ON-OFF signaling with ON-OFF pulses (ON = bit 1, OFF = bit 0). A camera captures image frames of the array which are then individually processed and sequentially decoded to retrieve data. To demodulated data transmission, a motion tracking algorithm is implemented in OpenCV (Open source Computer Vision library) to classify the transmission pattern. One of the most advantages of proposed architecture is Computer Vision (CV) based image analysis techniques which can be used to spatially separate signals and remove interferences from ambient light. It will be the future challenges and opportunities for mobile communication networking research.

SDRAM 의 AC 변수 테스트를 위한 BIST구현 (The Implementation of the Built-In Self-Test for AC Parameter Testing of SDRAM)

  • Sang-Bong Park
    • 정보학연구
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    • 제3권3호
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    • pp.57-65
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    • 2000
  • 본 논문에서는 내장된 SDRAM 에 대한 기능 및 AC 변수를 테스트하는 BIST 회로의 알고리듬 및 회로 구현을 기술하였다 제안된 BIST 회로를 사용하여 내장된 SDRAM 의 고장난 비트 셀의 어드레스 위치를 출력시킴으로써 Redundancy 회로 사용에 관한 정좌를 제공하도록 설계하였다. 또 실지 동작 주파수에서의 내장된 SDRAM 의 AC 변수에 대한 테스트를 수행하여 메모리의 오동작이 발생된 경우 어떤 AC 변수가 설계 사양을 벗어나는지를 출력하도록 구현하였다. $0.25\mu\textrm{m}$ 셀 라이브러리를 이용하여 회로 합성하는 경우 전체 게이트 수는 약 4,500 개 정도이고, Verilog 레지스터 전송 언어를 사용하여 설계 및 시뮬레이션을 통하여 검증하였다. 하나의 AC 변수에 대해서 2Y-March 14N 알고리듬으로 테스트하는 경우 100Mhz 동작 주파수에서 테스트 시간은 200ms 정도이다.

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Practical resolution of angle dependency of multigroup resonance cross sections using parametrized spectral superhomogenization factors

  • Park, Hansol;Joo, Han Gyu
    • Nuclear Engineering and Technology
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    • 제49권6호
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    • pp.1287-1300
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    • 2017
  • Based on the observation that ignoring the angle dependency of multigroup resonance cross sections within a fuel pellet would result in nontrivial underestimation of the spatial self-shielding of flux, a parametrized spectral superhomogenization (SPH) factor library (PSSL) method is developed as a practical means of resolving the problem. Region-wise spectral SPH factors are calculated by the normal and transport corrected SPH iterations after ultrafine group slowing down calculations over various light water reactor pin-cell configurations. The parametrization is done with fuel temperature, U-238 number density, fuel radius, moderator source represented by ${\Sigma}_{mod}V_{mod}$, and the number density ratio of resonance nuclides to that of U-238 in a form of resonance interference correction factors. The parametrization is successful in that the root mean square errors of the interpolated SPH factors over the fuel regions of various pin-cells are within 0.1%. The improvement in reactivity error of the PSSL method is shown to be superior to that by the original SPH method in that the reactivity bias of -200 pcm to -300 pcm vanishes almost completely. It is demonstrated that the environment effect takes only about 4% in the reactivity improvement so that the pin-cell based PSSL method is effective in the assembly problems.