• Title/Summary/Keyword: biological factors

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Developing the Ecological Performance Standard for Replaced Wetlands by Analyzing Reference Wetlands (표준습지 분석을 통한 대체습지의 생태 성능 기준 개발)

  • Koo, Bon-Hak;Jeong, Jin-Yong;Park, Mi-Ok
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.14 no.1
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    • pp.11-22
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    • 2011
  • This study was established to build and suggest the Ecological Performance Standards for replaced wetlands as the mitigation strategies for the construction projects. The request performance and assessment factors and standards were derived by bibliographic review and verified by the field survey for the reference wetlands. And the weights for each factor were derived by AHP(Analytical Hierarchy Process) method. The results are as follows : 1) Assessment factors were induced by in-depth research of many wetland assessment models and benchmarks evaluated ecological functions. This study proposed final 12 assessment factors through ecological specialist and experts interviews added with literature analysis. 2) 10 natural wetlands were selected as Reference Wetlands as the measure to propose assessment factors and assessment criteria. Those reference wetlands are well-conserved inland natural wetlands classified to the one having worthy to conserve (grade "high") according to RAM(Rapid Assessment Method). Reference wetlands chosen by the study are Parksilji, Jeongyangji, Mulkubi, Bawineupkubi, Jilnalneup, Jinchonneup, Doomoso, Haepyung wetland, Whangjeong wetland, and Whapo wetland. The research developed assessment criteria for the performance assessment factors based on several explorations of the reference wetlands. 3) "Requiring performance" of replaced wetlands is defined as "to carry out similar or same ecological functions provided by natural wetlands", in overall. The detailed requiring performances are as follows; ${\bullet}$ to play a role of wildlife habitats ${\bullet}$ to have biological diversity ${\bullet}$ to connect with other ecosystems ${\bullet}$ to provide water environment to perform good ecological functions 4) The assessment factors for required performance are categorized by wildlife habitat function, biological diversity, connectivity of adjacent ecosystem, and water environment. Wildlife habitat category is consisted of wildlife habitat creation, size of replacement wetland, and site suitability. Biological diversity category contains the number of plant species, the number of wildlife species, and number of protected species as the sub-factors. Connectivity of adjacent ecosystem is comprised of wildlife corridor, green network and distance from other ecosystem. Finally, water environment make up with water quality, depth of water body, and shape of waterfront. 5) Finally, every assessment factors were verified and weighted by the AHP methods and the final standards were proposed. The weights of factors of requiring performance suggested as habitat (0.280), connectivity (0.261), diversity (0.260), hydraulic environment (0.199). And those of detailed sub-factors are site suitability (0.118), protected species (0.096), distance to neighbor ecosystem (0.093), habitat creating (0.091), green corridor (0.090) etc.

Development of the Evaluation Criteria for the Usefulness of Biological Resources (생물자원의 유용성 평가 기준 개발)

  • Lee, Hyun-Woo;Kim, Dong-Wook;Won, Hyo-Sig
    • Journal of Environmental Policy
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    • v.12 no.4
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    • pp.3-21
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    • 2013
  • This research aims to analyze the usefulness of biological resources from the perspective of the users from various angles and after taking these factors into consideration, provide policy implication and scientific criteria for judging and choosing useful biological resources. Among biological resources defined in CBD, the subject of the research was confined to the biological resource as a unit which can be actually used in benefit sharing and trade. Also, among diverse values of biological resources, the usefulness was assessed focusing on the utility value and scarcity. Usefulness was rated on a scale of 1 to 5 (5 grades). The rating was adjusted for the biological resources that need to be managed as a part of the management policy. It is expected that the criteria of this study will be useful for the following: (1) the procurement of biological resources in the need for primary protection and management (2) the utilization of secured biological resources by analyzing their utility value and using them in biological resources industry (3) securement of sovereignty over biological resources, such as prior access permit under the Nagoya protocol, through management and protection of biological resources in Korea.

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Biological and Genetic Prediction Factors Associated with Suicidal Behavior (자살 행동과 연관된 생물학적, 유전적 예측인자)

  • Kim, Yong-Ku
    • Korean Journal of Biological Psychiatry
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    • v.12 no.1
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    • pp.3-12
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    • 2005
  • Most suicides(about 90%) occur in the context of psychiatric disorders. Prediction of suicide risk in patients with mental illness is very important in preventing suicide attempts. However, current approaches to predict suicidality are based on clinical history and have low specificity and biological markers are not yet included. Many studies have explored the association between different biological parameters and suicidality. Studies of cerebro-spinal fluid(CSF) demonstrated that 5-HIAA and HVA levels were lower in patients with a history of suicide. Platelet serotonin transporter and the 5-HT2 serotonin receptor have also been studied in relation to violence and suicide. Depressive patients with greater suicidal tendency had significantly lower cholesterol concentrations but some researchers failed to find the correlation. DST non-supression is reported to predict suicidality in major depression. Several studies demonstrated a relationship between intron 7 polymorphism of tryptophan hydroxylase and suicidal behavior. Since suicide is not occurred in a single disease, the systematic and comprehensive study in large samples with various diagnoses is necessary to find the biological and genetic predictors of suicidal behavior.

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Evaluation on Biological Sensitivity of Three Fumigants Used for Conservation of Wooden Cultural Property

  • Kim, Si Hyun;Kim, Dae Woon;Lee, Hyun Ju;Lee, Byung Ho;Kim, Bong Su;Chung, Yong Jae
    • Journal of the Korean Wood Science and Technology
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    • v.44 no.4
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    • pp.526-538
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    • 2016
  • Fumigants are used worldwide for control of biological agents that damage wooden cultural property. To establish a policy for fumigant use, biological evaluation of insects and microorganisms considering many factors is required. This study was performed to evaluate biological sensitivity and wood penetration of three fumigants applied for control of biological agents that damage wooden cultural properties in Korea. Among these, methyl bromide and ethylene oxide can control insects and fungi when exposed directly. However, they were unable to completely control biological agents within deeper parts of wood. Ethanedinitrile, which was developed as an alternative fumigant, exhibited outstanding wood penetration and biocidal efficacy. Further research involving various environmental conditions is warranted.

Investigation of cultivation and FAME composition isolated Phaeodactylum tricornutum from Youngheung island (영흥도에서 분리된 Phaeodactylum tricornutum의 증식 및 Monounsaturated fatty acid 관련 지방산 조성 분석)

  • Lee, SangMin;Cho, Yonghee;Shin, ong-Woo;Jeon, Hyonam;Ryu, YoungJin;Lim, Sang-Min;Lee, Choul-Gyun
    • Journal of Marine Bioscience and Biotechnology
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    • v.6 no.2
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    • pp.47-52
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    • 2014
  • Oxidation stability and cold fuid property are considered as the most important factors for determining biodiesel quality. Among the fatty acids, monounsaturated fatty acid satisfy both oxidation stability and cold flow property of biodiesel quality standards. Microalgae with high monounsaturated fatty acid contents is have some benefit for producing to produce biodiesels with satisfying quality standards. In this study, monounsaturated fatty acid contents of a isolated microalga from Youngheung island was analyzed. Phaeodactylum tricornutum was isolated by streaking, and growth rate and fatty acid composition of the algae were investigated. Total FAME contents were consisted of 26% of saturated fatty acids, 43% of monounsaturated fatty acids, and 18% of polyunsaturated fatty acids. The contents of monounsaturated fatty acid were especially high in the Phaeodactylum species. This result implies that the FAMEs from P. tricornutum may contribute to improve the oxidation stability and cold flow property of biodiesel.

Quantitative Frameworks for Multivalent Macromolecular Interactions in Biological Linear Lattice Systems

  • Choi, Jaejun;Kim, Ryeonghyeon;Koh, Junseock
    • Molecules and Cells
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    • v.45 no.7
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    • pp.444-453
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    • 2022
  • Multivalent macromolecular interactions underlie dynamic regulation of diverse biological processes in ever-changing cellular states. These interactions often involve binding of multiple proteins to a linear lattice including intrinsically disordered proteins and the chromosomal DNA with many repeating recognition motifs. Quantitative understanding of such multivalent interactions on a linear lattice is crucial for exploring their unique regulatory potentials in the cellular processes. In this review, the distinctive molecular features of the linear lattice system are first discussed with a particular focus on the overlapping nature of potential protein binding sites within a lattice. Then, we introduce two general quantitative frameworks, combinatorial and conditional probability models, dealing with the overlap problem and relating the binding parameters to the experimentally measurable properties of the linear lattice-protein interactions. To this end, we present two specific examples where the quantitative models have been applied and further extended to provide biological insights into specific cellular processes. In the first case, the conditional probability model was extended to highlight the significant impact of nonspecific binding of transcription factors to the chromosomal DNA on gene-specific transcriptional activities. The second case presents the recently developed combinatorial models to unravel the complex organization of target protein binding sites within an intrinsically disordered region (IDR) of a nucleoporin. In particular, these models have suggested a unique function of IDRs as a molecular switch coupling distinct cellular processes. The quantitative models reviewed here are envisioned to further advance for dissection and functional studies of more complex systems including phase-separated biomolecular condensates.

NEUROD1 Intrinsically Initiates Differentiation of Induced Pluripotent Stem Cells into Neural Progenitor Cells

  • Choi, Won-Young;Hwang, Ji-Hyun;Cho, Ann-Na;Lee, Andrew J.;Jung, Inkyung;Cho, Seung-Woo;Kim, Lark Kyun;Kim, Young-Joon
    • Molecules and Cells
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    • v.43 no.12
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    • pp.1011-1022
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    • 2020
  • Cell type specification is a delicate biological event in which every step is under tight regulation. From a molecular point of view, cell fate commitment begins with chromatin alteration, which kickstarts lineage-determining factors to initiate a series of genes required for cell specification. Several important neuronal differentiation factors have been identified from ectopic over-expression studies. However, there is scarce information on which DNA regions are modified during induced pluripotent stem cell (iPSC) to neuronal progenitor cell (NPC) differentiation, the cis regulatory factors that attach to these accessible regions, or the genes that are initially expressed. In this study, we identified the DNA accessible regions of iPSCs and NPCs via the Assay for Transposase-Accessible Chromatin sequencing (ATAC-seq). We identified which chromatin regions were modified after neuronal differentiation and found that the enhancer regions had more active histone modification changes than the promoters. Through motif enrichment analysis, we found that NEUROD1 controls iPSC differentiation to NPC by binding to the accessible regions of enhancers in cooperation with other factors such as the Hox proteins. Finally, by using Hi-C data, we categorized the genes that directly interacted with the enhancers under the control of NEUROD1 during iPSC to NPC differentiation.

Growth Responses and Ecological Niche of Rare plant Eleutherococcus gracilistylus(W. W. Sm.) S. Y. Hu in Gotjawal, Jeju Island (제주 곶자왈 희귀식물 섬오갈피나무(Eleutherococcus gracilistylus)의 생육반응 및 생태지위)

  • Yoon-Kyung Choi;Eui-Joo Kim;Jung-Min Lee;Ji-Won Park;Yoon-Seo Kim;Kyeong-Mi Cho;Se-Hee Kim;Gyu-Ri Kim;Ju-Seon Lee;Young-Han You
    • Journal of Wetlands Research
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    • v.25 no.3
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    • pp.196-204
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    • 2023
  • Eleutherococcus gracilistylus is a designated rare plant by the Korea Forest Service, a deciduous broad leaf shrub native to the Gotjawal region, Jejudo. This study aimed to analyze the growth responses of E. gracilistylus to three environment factors such as light, moisture, and organic matter, and measure its ecological niche breadth. Based on these results, an attempt was made to identify suitable environmental conditions. E. gracilistylus exhibited increased above-ground length, leaf area, and plant leaf weight under intermediate conditions of light availability(L3, 50% of natural light), rather than very high or very low light conditions. Moisture availability and organic matter availability showed variations in growth responses in terms of leaf count and plant leaf weight. Under moisture availability, growth was favorable under or below intermediate conditions (M3, 240ml), while under organic matter availability, growth response was better above intermediate conditions (N3, 12%). Ecological niche breadth showed in the light factor(0.951), the moisture factor(0.977), and the organic matter content one(0.964). These results indicate that the preferred habitat of E. gracilistylus is somewhat shady, slightly dry, and has a lot of nutrients, and that the environmental factor that has the greatest impact on growth is the amount of light, which is considered to be a priority consideration for habitat management in its native area.