• Title/Summary/Keyword: biodegradation,

Search Result 1,045, Processing Time 0.023 seconds

Isolation and Characterization of Nonylphenol-degrading Bacteria

  • Yu, Dae-Ung;Kim, Dong-Myung;Chung, Yong-Hyun;Lee, Yang-Bong;Kim, Young-Mog
    • Fisheries and Aquatic Sciences
    • /
    • v.15 no.2
    • /
    • pp.91-97
    • /
    • 2012
  • To isolate a nonylphenol (NP)-degrading bacterium, we isolated a single colony from the NP-degrading microbial consortium SW-3, which was previously isolated from an aqueous environment. Ten colonies that exhibited different cell morphologies were isolated and the strains were named SW-3-A, -B, -C, -D, -E, -F1, -F2, -G, -H, and -I. The ability of isolates to degrade NP was evaluated by kinetic analysis by the constant of NP degradation rate ($k_1$) and the half-life time of NP degradation ($t_{1/2}$). SW-3-F1, -F2, -G, and -I strains were superior at degrading NP. The $k_1$ and $t_{1/2}$ values of the four strains were sixfold higher and one-sixth lower, respectively, than those of the consortium strain. Additionally, SW-3-F1, -G, and -I strains were tested for their ability to degrade NP during coculture. NP degradation by coculture with a combination of all three strains was inferior to that of culture conducted with single isolates, suggesting that the three strains are antagonistic toward each other during NP degradation.

Fibrobacter succinogenes, a Dominant Fibrolytic Ruminal Bacterium: Transition to the Post Genomic Era

  • Jun, H.S.;Qi, M.;Ha, J.K.;Forsberg, C.W.
    • Asian-Australasian Journal of Animal Sciences
    • /
    • v.20 no.5
    • /
    • pp.802-810
    • /
    • 2007
  • Fibrobacter succinogenes, a Gram-negative, anaerobic ruminal bacterium is a major fibre digesting species in the rumen. It intensively degrades plant cell walls by an erosion type of mechanism, burrowing its way through the complex matrix of cellulose and hemicellulose with the release of digestible and undigested cell wall fragments. The enzymes involved in this process include a combination of glucanases, xylanases, arabinofuranosidase(s) and esterases. The genome of the bacterium has been sequenced and this has revealed in excess of 100 putative glycosyl hydrolase, pectate lyase and carbohydrate esterase genes, which is greater than the numbers reported present in other major cellulolytic organisms for which genomes have been sequenced. Modelling of the amino acid sequences of two glycanases, CedA and EGB, by reference to crystallized homologs has enabled prediction of the major features of their tertiary structures. Two dimensional gel electrophoresis in conjunction with mass spectroscopy has permitted the documentation of proteins over expressed in F. succinogenes grown on cellulose, and analysis of the cell surfaces of mutant strains unable to bind to cellulose has enabled the identification of candidate proteins with roles in adhesion to the plant cell wall substrate, the precursor to cellulose biodegradation.

페놀분해 효모 Candida tropicalis PW-51의 분리 및 분해특성

  • Kim, Seong-Bin;Kim, Chi-Kyung;Kim, Hee-Sik;Lee, Chang-Ho;Shin, Ki-Sun;Kwon, Gi-Seok;Yoon, Byung-Dae;Oh, Hee-Mock
    • Microbiology and Biotechnology Letters
    • /
    • v.24 no.6
    • /
    • pp.743-748
    • /
    • 1996
  • For the biological treatment of phenolic resin wastewater containing phenol and formaldehyde, a phenol-degrading yeast was isolated from the papermill sludge, and then identified as Candida tropicalis PW-51 according to morphological, physiological and biochemical properties. The strain was able to degrade high phenol concentrations up to 2,000mg/l within 58 hours in batch cultures. Phenol-degrading efficiency by the strain was maximum at the culture conditions of a final concentration of 9 $\times$ 10$^{6}$ cells/ml, 30$\circ$C and pH 7.0. The mean degradation rate of phenol was highest at 45.5mg/l/h in 1,000mg/l phenol from 500mg/l to 2,000mg/l phenol. Because the enzyme activity of catechol 1,2-dioxygenase increased in the course of degradation of phenol, it seems that this strain degrades phenol via the ortho-cleavage of benzene ring. The isolate C. tropicalis PW-51 could be effectively used for the biological treatment of phenolic resin wastewater.

  • PDF

Immobilization of Thermomyces lanuginosus Xylanase on Aluminum Hydroxide Particles Through Adsorption: Characterization of Immobilized Enzyme

  • Jiang, Ying;Wu, Yue;Li, Huixin
    • Journal of Microbiology and Biotechnology
    • /
    • v.25 no.12
    • /
    • pp.2016-2023
    • /
    • 2015
  • Xylanase plays important roles in a broad range of industrial production as a biocatalyst, and its applications commonly require immobilization on supports to enhance its stability. Aluminum hydroxide, a carrier material with high surface area, has the advantages of simple and low-cost preparation and resistance to biodegradation, and can be potentially used as a proper support for xylanase immobilization. In this work, xylanase from Thermomyces lanuginosus was immobilized on two types of aluminum hydroxide particles (gibbsite and amorphous Al(OH)3) through adsorption, and the properties of the adsorbed enzymes were studied. Both particles had considerable adsorptive capacity and affinity for xylanase. Xylanase retained 75% and 64% of the original catalytic activities after adsorption to gibbsite and amorphous Al(OH)3. Both the adsorptions improved pH and thermal stability, lowered activation energy, and extended lifespan of the immobilized enzyme, as compared with the free enzyme. Xylanase adsorbed on gibbsite and amorphous Al(OH)3 retained 71% and 64% of its initial activity, respectively, after being recycled five times. These results indicated that aluminum hydroxides served as good supports for xylanase immobilization. Therefore, the adsorption of xylanase on aluminum hydroxide particles has promising potential for practical production.

Adsorption of chlorhexidine digluconate on acid modified fly ash: Kinetics, isotherms and influencing factors

  • Singh, Astha;Sonal, Sonalika;Kumar, Rohit;Mishra, Brijesh Kumar
    • Environmental Engineering Research
    • /
    • v.25 no.2
    • /
    • pp.205-211
    • /
    • 2020
  • Chlorhexidine digluconate (CHD) in the aquatic environment causes irreversible change to microbes, making them resistant to biodegradation, which needs remediation other than biological process. Adsorption study was performed for the removal of CHD on fly ash (FA) as a function of pH and ionic strength. Experimental result has been validated by characterization using Scanning electron microscopy, Fourier Transform-Infrared Spectroscopy and Brunauer-Emmett-Teller. CHD adsorption with FA showed an increasing trend with an increase in pH. Variation in pH proved to be an influential parameter for the surface charge of adsorbent and the degree of ionization of the CHD molecules. The adsorption capacity of CHD decreased from 23.60 mg g-1 to 1.13 mg g-1, when ionic strength increased from to M. The adsorption isotherms were simulated well by the Freundlich isotherm model having R2 = 0.98. The Lagergren's model was incorporated to predict the system kinetics, while the mechanistic study was better explained by pseudo-second order for FA. On the basis of operational conditions and cost-effectiveness FA was found to be more economical as an adsorbent for the adsorption of CHD.

Biodegradation and Preparation of Biodegradable Film by using Natural Gums (천연 Gum류를 이용한 생분해성 필름의 제조와 생체분해)

  • Hwang, Sung-Kwy;Kim, Pan-Gyi;Hwang, Seong-Hee
    • Journal of the Korean Applied Science and Technology
    • /
    • v.15 no.4
    • /
    • pp.71-78
    • /
    • 1998
  • Gum is known as natural polymer. Biodegradable films were prepared by solution blend method in the weight ratio of natural gums(Xanthan, Locust bean, Guar) for the purpose of useful bioimplants. The possibility of bioimplants, which prepared from natural gums as a skin substitute was evaluated by measuring biodegradability. This biodegradable films were inserted in the back of rats and their of biodegradability were investigated by hematological change evaluation as a function of time to the biotransformation. Rats implantation test results showed that Guar induced increments of monocyte and basophil after 48 hours of implantation. And Locust bean showed increase of monocyte and neutrophile counts after 48 hours of implantation. And Xanthan induced decrease of monocyte and neutrophile at 24 hours after implantation. Guar and Locust showed high hemoglobin contents and hematocrit after 48 hours of implantation. Guar and Locust induced some suspects of incompatibility in the tissue after 48 hours, but three were little effects to the skin inflammation at 24 hours. These values of biodegradable films, which prepared from prepared from natural gums measured in this were some satisfiable results at short period with those of ideal skin bioimplants.

Biodegradation of Phenol by a Trichloroethylene-cometabolizing Bacterium

  • Park, Geun-Tae;Son, Hong-Joo;Kim, Jong-Goo;Lee, Sang-Joon
    • Journal of Microbiology and Biotechnology
    • /
    • v.8 no.1
    • /
    • pp.61-66
    • /
    • 1998
  • A microorganism which degrades phenol and co-metabolizes trichloroethylene (TCE) was isolated from Yangsan stream after enrichment in a medium containing phenol as the sole carbon source. The isolate EL-43P was identified as the genus Rhodococcus by its morphological, cultural and physiological characteristics. Phenol-induced cells of Rhodococcus sp. EL-43P degraded TCE. Toluene and nutrient broth could not replace the phenol requirement. The optimal conditions of initial pH and temperature of media for growth were 7.0~9.0 and $30~50^{\circ}C$, respectively. Rhodococcus sp. EL-43P could grow with phenol up to 1,000 ppm. Growth was inhibited by phenol at a concentration above 1,500 ppm. It was observed that Rhodococcus sp. EL-43P was able to degrade 90% of phenol (1,000 ppm) after 40 h in a culture. Phenol-induced cells of Rhodococcus sp. EL-43P degraded 95% of $5{\mu}M$ TCE in 6 h. Rhodococcus sp. EL-43P hardly degraded TCE above $100{\mu}M$.

  • PDF

Isolation and Characterization of a Naphthalene-Degrading Strain,Alcaligenes sp,A111 (Naphthalene 분해균주 Alcaligenes sp. A111의 분리 및 특성)

  • Oh, Hee-Mock;Kang, Jung-Hyun;Lee, Chang-Ho;Park, Chan-Sun;Ahn, Sung-Ku;Yoon, Byung-Dae;Kho, Yung-Hee
    • Microbiology and Biotechnology Letters
    • /
    • v.22 no.4
    • /
    • pp.423-429
    • /
    • 1994
  • A bacterial strain which formed a distinct colony on agar plate containing naphthalene as a vapor phase and grew well ina liquid minimal medium was isolated and identified as Alcaligenes sp. A111. Optimum temperature and pH for the cultivation of Alcaligenes sp. A111 were 30$\cir$C and 7.0, respectively. Cell growth increased dramatically from 12 hours after inoculation and revealed a stationary phase at about 48 hours. Relative growth rate ($\mu$')increased hyperbolically depending on the conceration of naphthalene up to 500 ppm and reached to the maximum value pf 2.8/day, but $\mu$' didn't change within a range of 500~4000 ppm naphthalene. NH$_{4}$Cl or NH$_{4}$NO$_{3}$ was preferrd as a nitrogen source and a P : N ratio by weight og 6 : 1 was favorable to cell growth. Alcaligenes sp. A111 utilized the intermediates of degradation of naphthalene and showed tolerance to benzene, toluene, and octane. therefore, it is suggested that Alcaligenes sp. A111 could be effectively used for the biological treatment of wastewater containing naphthalene in the presence of some aromatic compounds.

  • PDF

Cloning and Expression of a Parathion Hydrolase Gene from a Soil Bacterium, Burkholderia sp. JBA3

  • Kim, Tae-Sung;Ahn, Jae-Hyung;Choi, Min-Kyeong;Weon, Hang-Yeon;Kim, Mi-Sun;Seong, Chi-Nam;Song, Hong-Gyu;Ka, Jong-Ok
    • Journal of Microbiology and Biotechnology
    • /
    • v.17 no.11
    • /
    • pp.1890-1893
    • /
    • 2007
  • A bacterium, Burkholderia sp. JBA3, which can mineralize the pesticide parathion, was isolated from an agricultural soil. The strain JBA3 hydrolyzed parathion to p-nitrophenol, which was further utilized as the carbon and energy sources. The parathion hydrolase was encoded by a gene on a plasmid that strain JBA3 harbored, and it was cloned into pUC19 as a 3.7-kbp Sau3AI fragment. The ORF2 (ophB) in the cloned fragment encoded the parathion hydrolase composed of 526 amino acids, which was expressed in E. coli DH10B. The ophB gene showed no significant sequence similarity to most of other reported parathion hydrolase genes.

BIODEGRADATION PATHWAYS OF TRICHLOROETHYLENE (TCE) AND METHYL BROMIDE (MeBr)

  • Chung, Keun-Yook
    • Journal of environmental and Sanitary engineering
    • /
    • v.16 no.3
    • /
    • pp.1-13
    • /
    • 2001
  • 트리클로로에틸렌 (trichloroethylene, TCE)는 오랜 시간동안 자연환경에서 잔류할 뿐만 아니라 TCE보다 더욱 더 독성이 강한 중간 생성물들을 만들기 때문에 미국과 대부분의 전세계 국가들로부터 주요 1차 환경오염물질로 분류되었다. 그러한 독성물질들은 혐기성 상태에서는 다이클로로 에틸렌(dichloroethylene, DCE)과 바이닐 클로라이드 (vinyl chloride, VC)와 같은 독성물질들이 생성되고 호기성 상태에서는 TCE epoxide계통의 물질들이 생성된다. 또한 훈증제인 메틸 브로마이드 (methyl bromide)는 대기의 오존층을 파괴하는 것으로 알려져 있고, 2001년경에 미국환경보호청 (USEPA)에 의해 사용이 금지될 것이다. TCE는 혐기성 조건하에서 연속적으로 탈염소화되고, 이어서 호기성 조건하에서 완전 산화될 수 있다. 그리하여 연속적인 혐기성 및 호기성 조건하에서 궁극적으로 TCE의 완전분해를 이루게된다. 메틸브로마이드는 화학적으로 가수분해되어 메틸 알콜 (methyl alcohol)로 되거나 유기물에 강하게 결합 (bound)된다. 또한 그것은 생물학적으로 포름알데하이드 (formaldehyde)로 산화되거나 메틸알콜로 가수분해된다. 수많은 연구자들에 의해 행해진 연구들은 TCE와 MeBr은 메탄 혹은 암모니아 산화 세균에 의한 공동대사과정 (cometabolism)을 통해 분해가 증진될 수 있다는 것을 보여주었다. 두 부류의 세균들이 두 화합물들을 분해시킬 수 있는 monooxygenase를 생산한다는 것은 잘 알려져 있다. 이 연구 논문에서 TCE와 MeBr의 생분해와 관련된 가장 최근의 연구논문들로부터 나온 핵심 연구결과들이 요약 검토된다. TCE와 MeBr로 오염된 현장을 정화하기 위해 이러한 기초연구결과들을 토대로 더욱 더 많은 연구가 필요 할 것으로 사료된다.

  • PDF