• Title/Summary/Keyword: WEB-Accessible System

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Development of a Meta-Information System for Microbial Resources

  • Yu Jae-Woo;Chung Won-Hyong;Sohn Tae-Kwon;Park Yong-Ha;Kim Hong-Ik
    • Journal of Microbiology and Biotechnology
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    • v.16 no.2
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    • pp.178-183
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    • 2006
  • Microbes are one of the most important bioresources in bioindustry and provide high economic values. Although there are currently about 6,000 bacterial species with validly published names, microbiologists generally assume that the number may account for less than 1% of the bacterial species present on Earth. To discover the remaining species, studies of metagenomes, metabolomes, and proteomes related to microbes have recently been carried out in various fields. We have constructed an information system that integrates various data on microbial resources and manages bioinformation to support efficient research of microorganisms. We have designated this system 'Bio-Meta Information System (Bio-MIS).' Bio-MIS consists of an integrated microbial resource database, a microbial resource input system, an integrated microbial resource search engine, a microbial resource online distribution system, a portal service, and management via the Internet. In the future, this system is expected to be connected with various public databases. We plan to implement useful bioinformatics software for analyzing microbial genome resources. The Web site is accessible at http://biomis.probionic.com.

Development of an Organism-specific Protein Interaction Database with Supplementary Data from the Web Sources (다양한 웹 데이터를 이용한 특정 유기체의 단백질 상호작용 데이터베이스 개발)

  • Hwang, Doo-Sung
    • The KIPS Transactions:PartD
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    • v.9D no.6
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    • pp.1091-1096
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    • 2002
  • This paper presents the development of a protein interaction database. The developed system is characterized as follows. First, the proposed system not only maintains interaction data collected by an experiment, but also the genomic information of the protein data. Secondly, the system can extract details on interacting proteins through the developed wrappers. Thirdly, the system is based on wrapper-based system in order to extract the biologically meaningful data from various web sources and integrate them into a relational database. The system inherits a layered-modular architecture by introducing a wrapper-mediator approach in order to solve the syntactic and semantic heterogeneity among multiple data sources. Currently the system has wrapped the relevant data for about 40% of about 11,500 proteins on average from various accessible sources. A wrapper-mediator approach makes a protein interaction data comprehensive and useful with support of data interoperability and integration. The developing database will be useful for mining further knowledge and analysis of human life in proteomics studies.

The Development and Evaluation of an Internet Social Support Program on Mothers of Congenitally Abnormal Children (선천성 이상아 어머니를 위한 사회적 지지 인터넷 중재 프로그램 개발 및 효과)

  • Lee, Hyejin
    • Journal of East-West Nursing Research
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    • v.19 no.2
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    • pp.159-167
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    • 2013
  • Purpose: The purpose of the study is to develop and to evaluate a internet-based social support program for the mothers of congenitally abnormal children. The theoretical basis of the study is the moderating effect model of social support theory (Cobb, 1976). Methods: In first phase, an internet support program was developed according to the practical web development stages proposed by Boling and Frick (2002). In the second phase, the internet support program was provided and evaluated to 18 mothers who reared congenitally abnormal children from March to May 2008. Results: In the first stage, demands of the program were collected from interviews of eighteen mothers of congenitally abnormal children of ages one to three. At the same time, literature review and validity of the contents were also examined. In the second stage, the correspondence of the program contents to the social support needed was also examined. In the third and fourth stages, prototype of the social program was prepared in documents and that of computer program was prepared. In the final stage, an internet-based web site was constructed. The social support provided by the web site were composed of informational support, emotional support and appraisal support including bulletin board system and chatting service. After program development, pre-tests and post-test were performed to investigate the effect of the program on maternal confidence and mood. Data were analyzed using Wilcoxon signed rank test. The analysis showed that maternal confidence of post-test was improved than that of pre-test with statistically meaningful figure (Z=-2.54, p<.05). The positive mood of post-test was also improved than that of pre-test and the result was statistically supported (Z=-2.20, p<.05). Conclusion: It is suggestive that the internet based social support programs is accessible and appropriate service to congenitally abnormal children's mother. It is necessary to develop and use the internet based social support programs in public health system.

Development of Network-Based Online GPS Baseline Processing System (네트워크 기반 온라인 GPS 기선해석 시스템 개발)

  • Kim, Su-Kyung;Bae, Tae-Suk
    • Journal of the Korean Association of Geographic Information Studies
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    • v.14 no.2
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    • pp.138-146
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    • 2011
  • With the increased use of GPS in the field of various applications including surveying, the request for fast and precise positional information has increased. Several countries such as USA, Canada, and Australia have already been operating Internet-based automatic GPS data analysis system using e-mail and FTP. Expanding GPS market, it is necessary to establish automatic GPS baseline processing system that is accessible via Internet. The system developed in this study is operating on the web, and it allows the users to access easily regardless of time and place. The main processing engines are Bernese V5.0 and PAGES. They process user data with three GPS CORS(Continuously Operating Reference Station), and then send the report to the users through e-mail. This system allows users to process high accurate GPS data easily. It is expected that this system will be used for various GPS applications such as monitoring large-scale structures and providing spatial information services in private sector.

STUDY ON SOFTWARE DEVELOPMENT METHODOLOGY OF A WEB-BASED SYSTEM FOR HISTORICAL ASTRONOMY RECORDS AND ACCOUNTS SERVICE (고천문 기록 서비스를 위한 웹 기반 시스템의 소프트웨어 개발 방법론적 개발 연구)

  • SEO, YOON KYUNG;KIM, SANG HYUK;MIHN, BYEONG-HEE;CHOI, YOUNG SIL;AHN, YOUNG SOOK;CHOI, GOEUN;LEE, KI-WON;JEON, JUNHYEOK;BAHK, UHN MEE;HWANG, BYEONGHAN;JUNG, MYOUNGWOO
    • Publications of The Korean Astronomical Society
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    • v.35 no.3
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    • pp.29-41
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    • 2020
  • Korea has numerous astronomical resources, such as observational records, star maps, and a wealth of literature, covering the period from the Three Kingdoms (54 BC - 932 AD) to the Joseon Dynasty (1392 - 1910 AD). The research activities related to these resources have been limited to those by individual researchers. It is now necessary to conduct research by efficiently and systematically collecting and managing Korean astronomical records using an accessible Web environment. The purpose of this study is to complete a system that enables researchers systematically to collect and verify a large number of historical records related to astronomical phenomena in a Web environment. In 2017, a preliminary survey was conducted, and the requirements pertaining to an implementation target system were devised. In addition, a joint development plan was carried out by the developer, lasting three months in 2018. Although the system is relatively simple, it is the first system to be attempted in the historical astronomy field. In order to proceed with the systematic development, the software development methodology is applied to the entire process from deriving the requirements of researchers to completing the system. The completed system is verified through integrated function and performance tests. The functional test is repeated while modifying and testing the system based on various test scenarios. The performance test uses a performance measurement test tool that takes measurements by setting up a virtual operation environment. The developed system is now in normal operation after a one-year trial period. Researchers who become authorized to use the system can use it to verify the accuracy of data and to suggest improvements. The collected feedback will be reflected in future systems, and Korean astronomical records will be available for use internationally through a multilingual service.

The Development of Meta-Information System for Microbial Genome Resources (미생물 게놈자원을 위한 메타정보 시스템의 개발)

  • Chung, Won-Hyong;Yu, Jae-Woo;Sohn, Tae-Kwon;Park, Yong-Ha;Kim, Hong-Ik
    • Proceedings of the Korean Society for Bioinformatics Conference
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    • 2003.10a
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    • pp.245-250
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    • 2003
  • There are currently about 6000 bacterial species with validly published names, but scientists assume that these may be less than 1% of bacterial species present on the earth. Microbial resource is one of the most important bioresources in bioinderstry and provides us with high economic values. To find missing ones, the studies of metagenome, metabolome, and proteome about microbes have started recently in developed countries. We construct the information system that integrates information on microbial genome resources and manages the information to support efficient research of microbial genome application, and name this system 'Bio-Meta Information System (Bio-MIS)'. Bio-MIS consists of integrated microbial genome resources database, microbial genome resources input system, integrated microbial genome resources search engine, microbial resources on-line distribution system, portal service and management via internet. In the future, we will include public database connection and implement useful bioinformatics software for analyzing microbial genome resources. The web-site is accessible at http://biomis.probionic.com

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Retrieval algorithm for Web Document using XML DOM (XML DOM을 이용한 웹문서 검색 알고리즘)

  • 김노환;정충교
    • Journal of the Korea Computer Industry Society
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    • v.2 no.6
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    • pp.775-782
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    • 2001
  • Until recently Web retrieval engine has presented a demanded document to users according to the amount and the frequency of inquired key words in each document under the assumption that the more key words a document has, the more accessible it is. This method of searching doesn't matter to a normal document such as HTML Web data in which structural information is not involved. However, Web data realized in XML contains structural information and modeling of graphic forms is also available. Therefore, in the case of XML, this method leads to no less trouble since it depends only on the frequency of key words. We consider that this problem can be resolved by way of inquiry which is similar to SQL. This form of inquiry enables us to snatch an exact data we want in a quick and clear way with a full advantage of structural quality of XML, overcoming the shortcomings of frequency-based engine. In this paper, We aim to design a model of information retrieval system of XML data using XML DOM and consider its algorithm related with it.

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Development of an Analysis Program of Type I Polyketide Synthase Gene Clusters Using Homology Search and Profile Hidden Markov Model

  • Tae, Hong-Seok;Sohng, Jae-Kyung;Park, Kie-Jung
    • Journal of Microbiology and Biotechnology
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    • v.19 no.2
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    • pp.140-146
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    • 2009
  • MAPSI(Management and Analysis for Polyketide Synthase Type I) has been developed to offer computational analysis methods to detect type I PKS(polyketide synthase) gene clusters in genome sequences. MAPSI provides a genome analysis component, which detects PKS gene clusters by identifying domains in proteins of a genome. MAPSI also contains databases on polyketides and genome annotation data, as well as analytic components such as new PKS assembly and domain analysis. The polyketide data and analysis component are accessible through Web interfaces and are displayed with diverse information. MAPSI, which was developed to aid researchers studying type I polyketides, provides diverse components to access and analyze polyketide information and should become a very powerful computational tool for polyketide research. The system can be extended through further studies of factors related to the biological activities of polyketides.

Tendency Analysis of Information System for Effectively Management of IMO Document (IMO문서의 효과적 관리를 위한 국내.외 정보시스템 동향 분석)

  • Jang, Woon-Jae;Jang, Seung-Do;Cho, Min-Chul
    • Journal of Korea Ship Safrty Technology Authority
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    • s.33
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    • pp.63-73
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    • 2012
  • The Ministry of Land, Transport and Maritime Affairs(MLTM) constructed the IMO Korea homepage to owned jointly IMO information when establishing a international standard in about marine transport and the shipbuilding, in order to speak for the profit of Korea in IMO and it was double renewal since 2004. But the newly re-opened the IMO Korea homepage is also operated to the level which simply keeps IMO documents because of limited H/W sizes. This study investigated and analyzed the domestic and similar foreign homepages to provide effectively about the IMO informations At the result, these homepages were serviced to the meeting resultants using the various contents such as Semantic search, Thesaurus search, establishment of web accessible etc. Therefore, the existing IMO Korea homepage must be re-constructed as IMO Information Portal Site to provide better information.

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eXtensible Rule Markup Language (XRML): Design Principles and Application (확장형 규칙 표식 언어(eXtensible Rule Markup Language) : 설계 원리 및 응용)

  • 이재규;손미애;강주영
    • Journal of Intelligence and Information Systems
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    • v.8 no.1
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    • pp.141-157
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    • 2002
  • extensible Markup Language (XML) is a new markup language for data exchange on the Internet. In this paper, we propose a language extensible Rule Markup Language (XRML) which is an extension of XML. The implicit rules embedded in the Web pages should be identifiable, interchangeable with structured rule format, and finally accessible by various applications. It is possible to realize by using XRML. In this light, Web based Knowledge Management Systems (KMS) can be integrated with rule-based expert systems. To meet this end, we propose the six design criteria: Expressional Completeness, Relevance Linkability, Polymorphous Consistency, Applicative Universality, Knowledge Integrability and Interoperability. Furthermore, we propose three components such as RIML (Rule Identification Markup Language), RSML (Rule Structure Markup Language) and RTML (Rule Triggering Markup Language), and the Document Type Definition DTD). We have designed the XRML version 0.5 as illustrated above, and developed its prototype named Form/XRML which is an automated form processing for disbursement of the research fund in the Korea Advanced Institute of Science and Technology (KAISI). Since XRML allows both human and software agent to use the rules, there is huge application potential. We expect that XRML can contribute to the progress of Semantic Web platforms making knowledge management and e-commerce more intelligent. Since there are many emerging research groups and vendors who investigate this issue, it will not take long to see XRML commercial products. Matured XRML applications may change the way of designing information and knowledge systems in the near future.

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