• Animal cells and systems
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• v.1 no.1
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• pp.25-29
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• 1997

Four external and 27 cranial characters of striped field mice (Apodemus agrarius) from 16 regions in China and Korea, representing six subspecies, were analyzed by multivariate methods. Three subgroups were recognized: the large-size form from Cheju island, Korea (subspecies chejuensis), the middle-size form from the Korean peninsula (subspecies coreae), and the small-size form from China (subspecies manchuricus, pallidior, ningpoensis, insulaemus). It was confirmed that four subspecies of striped field mouse from China can be classified into subspecies ningpoensis, as noted by Corbet (1978), and that subspecies coreae and chjuensis are distinct subspecies, as stated by Jones and Johnson (1965). In the future, morphometric analyses with striped field mice from Europe and Russia will be necessary to confirm subspecies classification of A. agrarius agrarius.

• The Korean Journal of Zoology
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• v.37 no.1
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• pp.33-39
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• 1994

Four external and 27 cranial characters of Korean field mice (Apodemus peninsuluek from nine localities in eastern Asia, representing ave subspecies, were analyzed by multivariate statistical methods. Three forms were recognized: a large-size form from Korea (subspecies peninsulael, southern Manchuria (praeto4, and northern Manchuria (majofi a middle-size form from urestern Siberia (tschergal and southuvestern China (sowerbyi); a small-size form from northeastern China (sowerbyi). It is also revealed that variations among the three forms are clinal rind circular. It is confirmed that Apodemus peninsuloe could be classified into two subspecies (peninsulae and sowerbyl) within the distribution range in the continent of Asia, as noted tv Corbel (1978). However, it is found that subspecies peninsulae includes praetor and moior and that subspecies sowerbyi includes tscherga, indicating that subspecies tscherga is not the synonym of subspecies peninsulae, but that of subspecies sowerbyi.

• Animal Systematics, Evolution and Diversity
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• v.12 no.3
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• pp.203-210
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• 1996

Four external and 27 cranial characters of Korean field mice (Apodemus peninsulae) from nine regions in China and Korea, representing three subspecies, were analyzed by multivariate methods. Four size-forms were recognized a largest-size form Mt. Weolak and Yeoncheon in Korea (= subspecies peninsulae) and Kirin and Heilung in China (= subspecies praetor), a large-size form from Inner Mongolia in China (= subspecies praetor) and Sanxi and Sandong in China (= subspecies sowerbyi), a middle-size form from Beijing in China (= subspecies sowerbyi), and a small-size form from Xinjiang in China (= subspecies sowerbyi). Although Corbet (1978) recognized only two subspecies in A. peninsulae, subspecies peninsulae and sowerbyi, within its distributional range in the continent of Asia, it was revealed in this study with morphometric characters that A. peninsulae could not be classified simply into two subspecies, because subspecies praetor and subspecies sowerbyi formed the large-size form and because subspecies sowerbyi was so diverse in its morphology as to be composed of three size-forms. Further analyses with the samples from other regions of China and Russia seem to be necessary to clarify the taxonomy of A. peninsulae.

• Journal of Microbiology and Biotechnology
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• v.31 no.2
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• pp.280-289
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• 2021

Genetic markers currently used for the discrimination of Lactobacillus delbrueckii subspecies have low efficiency for identification at subspecies level. Therefore, our objective in this study was to select novel genetic markers for accurate identification and discrimination of six L. delbrueckii subspecies based on pangenome analysis. We evaluated L. delbrueckii genomes to avoid making incorrect conclusions in the process of selecting genetic markers due to mislabeled genomes. Genome analysis showed that two genomes of L. delbrueckii subspecies deposited at NCBI were misidentified. Based on these results, subspecies-specific genetic markers were selected by comparing the core and pangenomes. Genetic markers were confirmed to be specific for 59,196,562 genome sequences via in silico analysis. They were found in all strains of the same subspecies, but not in other subspecies or bacterial strains. These genetic markers also could be used to accurately identify genomes at the subspecies level for genomes known at the species level. A real-time PCR method for detecting three main subspecies (L. delbrueckii subsp. delbrueckii, lactis, and bulgaricus) was developed to cost-effectively identify them using genetic markers. Results showed 100% specificity for each subspecies. These genetic markers could differentiate each subspecies from 44 other lactic acid bacteria. This real-time PCR method was then applied to monitor 26 probiotics and dairy products. It was also used to identify 64 unknown strains isolated from raw milk samples and dairy products. Results confirmed that unknown isolates and subspecies contained in the product could be accurately identified using this real-time PCR method.

• Animal Systematics, Evolution and Diversity
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• v.15 no.2
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• pp.153-164
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• 1999

One hundred and eleven samples of six subspecies of striped field mouse, Apodemus agrarius Pallas from Korea, China and Russia, were used for the analysis of mitochondrial DNA(mtDNA) fragment patterns resulted from the digestion with eight restriction enzymes by blot hybridization technique. All 32 fragments, nine mtDNA haplotypes, and four major subgroups with the mean divergence value of 0.896 to 1.150% were revealed. In summary, three forms are recognized: [I, subspecies chejuensis (Chejudo island, Korea)], [II, subspecies pallescens (southwestern Korea), coreae (central Korea), and septentrionalis (Russia)], and [III, subspecies manchuricus (northeastern China) and pallidior (northern China)], although some samples of subspecies coreae are somewhat different from almost all samples of six subspecies, and some samples of subspecies pallidior are similar with all samples of subspecies septentrionalis to form same haplotype. It is confirmed that A. agrarius chejuensis is a distinct subspecies, that subspecies coreae (including pallescens) is also a distinct subspecies, that subspecies manchuricus and pallidior are synonyms of subspecies ningpoensis, and that subspecies septentrionalis is a synonym of subspecies ningpoensis, and that subspecies septentrionalis is a synonym of subspecies agrarius. Moreover, it seems that A. agrarius shows constant karyotype, minimal variation in mtDNA genotype, and considerable divergence in morphometric characters, although further analyses with additional samples of A. agrarius in Eurasia will be necessary to determine the degree of variation of these taxonomic characters and to clarify subspecies classification as well.

• Animal Systematics, Evolution and Diversity
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• v.22 no.1
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• pp.87-89
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• 2006

The mitochondrial cytochrome b gene of the Korean subspecies (Falco tinnunculus interstinctus) of the common kestrel has been analyzed. According to the molecular phylogeny of six subspecies of common kestrel, six subspecies of the common kestrel were divided into two clades: the first clade is composed of the South African subspecies (F. t. rupicolus) and the second clade includes 5 subspecies (F. t. tinnunculus, F. t. rufescens, F. t. interstinctus, F. t. canariensis and F. t. dacotiae) of the common kestrel. Korean subspecies, F. t. interstinctus was closely related to F. t. rufescens and original subspecies F. t. tinnunculus.

• The Korean Journal of Malacology
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• v.7 no.1
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• pp.1-11
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• 1991

Authors describe here five new species and three new subspecies of Korean Iand snail fauna. They are collected from the southern part of Korea including Ullungdo and Chejudo. The generic names of these new species and subspecies were discribed in the [ Il-lustrated Encyclopedia of fauna & flora of Korea V ol.32 Mollusca(I)]. The newly recorded species and subspecies are as follows:Genus Diplommatina Benson, 1849 Subgenus Sinica Mollendorff, 1885 Diplommatina(Sinica) paxillus changensis n. subsp. Diplommatina(Sinica) chejuensis n. sp.Genus Arinia H. & A. Adams, 1856 Arinia chejuensis n. sp.Authors describe here five new species and three new subspecies of Korean Iand snail fauna. They are collected from the southern part of Korea including Ullungdo and Chejudo. The generic names of these new species and subspecies were discribed in the [ Il-lustrated Encyclopedia of fauna & flora of Korea V ol.32 Mollusca(I)]. The newly recorded species and subspecies are as follows:Genus Diplommatina Benson, 1849 Subgenus Sinica Mollendorff, 1885 Diplommatina(Sinica) paxillus changensis n. subsp. Diplommatina(Sinica) chejuensis n. sp.Genus Cavernacmella Habe, 1942 cavernacmella coreana n. sp.Authors describe here five new species and three new subspecies of Korean Iand snail fauna. They are collected from the southern part of Korea including Ullungdo and Chejudo. The generic names of these new species and subspecies were discribed in the [ Il-lustrated Encyclopedia of fauna & flora of Korea V ol.32 Mollusca(I)]. The newly recorded species and subspecies are as follows:Genus Diplommatina Benson, 1849 Subgenus Sinica Mollendorff, 1885 Diplommatina(Sinica) paxillus changensis n. subsp. Diplommatina(Sinica) chejuensis n. sp.Genus Mirus Albers, 1850 Mirus junensis n. sp.Genus Paganizaptyx Kuroda, 1945 Paganizaptyx miyanagai ullungdoensis. subsp.Authors describe here five new species and three new subspecies of Korean Iand snail fauna. They are collected from the southern part of Korea including Ullungdo and Chejudo. The generic names of these new species and subspecies were discribed in the [ Il-lustrated Encyclopedia of fauna & flora of Korea V ol.32 Mollusca(I)]. The newly recorded species and subspecies are as follows:Genus Diplommatina Benson, 1849 Subgenus Sinica Mollendorff, 1885 Diplommatina(Sinica) paxillus changensis n. subsp. Diplommatina(Sinica) chejuensis n. sp.Genus Ratinella Shuttleworth, 1877 Retinella radiatula coreana n. subsp.Genus Sitalina Thiele, 1931 Sitalina chejuensis n. sp.

• Animal Systematics, Evolution and Diversity
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• v.14 no.4
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• pp.341-355
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• 1998

Thirty one morphometric characters of specimens in 15 subspecies of striped field mouse(Apodemus agrarius Pallas) from Eurasia were analyzed to clarify taxonomic status of these subspecies. Five major subgroups in A. agrarius were revealed: I, a largest-size form, specimens from two southern from other six localities in Korea, subspecies coreae and pallescens; III, the other large-size from, specimens from Astrachan in western Russia, subspecies volgensis; IV, a medium-size form, specimens from 16 localities in eastern Asia(North Korea, China, and eastern Russia), subspecies coreae, manchuricus, pallidior, ningpoensis, and insulaemus; V, a small-size form, specimens from 16 localities in western Asia and Europe (Kazakhstan, Russia, Lithuania, and Ukraine), subspecies tianschanicus, ognevi, agrarius, septentrionalis, nikolski, caucasicus, and karelicus. From this morphometric analyses, the followings are concluded: subspecies chejuensis is a larger-size form, as noted by Johnson and Jones(1955): subspecies pallescens is the synonym of subspecies agrarius, as suggested by Koh(1986): subspecies coreae from Korea is a large-size form and is idistinct from other 12 subspecies in Eurasia: the eastern form of subspecies ningpoensis by Corbet(1978) is a medium-size form o subspecies manchuricus, pallidior, ningpoensis, and insulaemus from eastern Asia (China and eastern Russia), and it includea North Korea specimens: a small-size form from western Asia and Europe(subspecies tianschanicus, ognevi, agrarius, septentrionalis, nikolski, caucasicus, and karelicus) is the western form of subspecies agrarius by Corbet(1978); the other large-size form of subspecies volgensis from western Russia is a distinct subspecies, which differs from the western subspecies agrarius. Therefore, it is concluded that 15 subspecies of A. agrarius can be classifed into five subspecies (chejuensis, coreae, ningpoensis, agrarius, and volgensis), although it is necessary to measure and analyze morphometric characters of specimens of other seven subspecies(albostriatus, maculatus, rubens, kahmanni, henrici, gloveri, and harti) for the complete reclassification of this species).

• The Korean Journal of Zoology
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• v.5 no.1
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• pp.35-38
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• 1962

Two subspecies are known to Family Hylidae(Order Anura) in Korea : namely , Hylaarborea japonica GUENTHER and H.a.stepheni BOULENGER, and they have been hitherto distinguished as different subspecies from four characteristics : the rate of interorbital to incternasal length, the rate of diameter of tympanum to diameter of 3 rd finger disc, the rate of the length of inner metatarsal tubercle to diameter of 3 rd finger disc, and the rate of inner metatarsal tubercle to the length of lst toe. The author has compared the above to subspecies for the characteristics with 123 individuals collected from ten different localities in Korea and has found that their fluctation curves overlap each other. The author considers, therefore, that the four characteristics could not be assumed as keys for the classification of the two subspecies and has reached the conclusion that these two subspecies should be regarded as one subspecies and Hyla arborea japonica GUENTHER should be given to both of them as the subspecies name.

• Journal of Crop Science and Biotechnology
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• v.10 no.3
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• pp.175-184
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• 2007

Two subspecies, japonica and indica, have been reported in rice, which differ in several ecotypic traits. However, reproductive barriers in hybrid progenies between subspecies have been major obstacles in breeding programs using inter-subspecific hybridization. As the first step to elucidate the reproductive barriers, we developed subspecies-specific(SS) STS markers in this study. A total of 765 STS primers were designed through comparing DNA sequences at every $2{\sim}3$cM interval between japonica and indica rices, which are available at Web DBs such as IRGSP, NCBI, TIGR, and GRAMENE, and tested for subspecies-specificity using 15 indica and 15 japonica varieties of diverse origin. Of them, 67 STS markers were identified as SS STS markers and their subspecies-specificity scores were estimated. The SS markers were dispersed throughout the genome along chromosomes. Of them, 64 SS markers were mapped on an RIL population derived from a Dasanbyeo(indica)/TR22183(japonica) cross. Genomic inclination of RILs was evaluated based on the genotyping with different types of markers. Association test between markers and segregation distortion revealed that segregation distortion might not be the cause of generating SS markers. The SS markers will be applicable to estimate the genomic inclination of varieties or lines and to study the differentiation of indica and japonica, and ultimately to breed true hybrid rice varieties in which desirable characters from both subspecies are recombined.