• Title/Summary/Keyword: Species classification

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Analysis of ITS Nucleotide Sequences in Ribosomal DNA of Morus Species (뽕나무속 식물의 ITS 영역 염기서열 분석)

  • 성규병;류근섭;김호락;남학우;구태원
    • Journal of Sericultural and Entomological Science
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    • v.43 no.1
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    • pp.1-8
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    • 2001
  • Nucleotide sequence in internal transcribed spacer (ITS) regions of ribosomal DNA among mulberry varieties (Morus species) were analyzed in order to identify the possibility of classification for the species. The variations in the ITS regions were compared among 9 mulberry varieties and one variety of Cudrania species as an outgroup. ITS 1 region of the varieties ranging from 219 to 220 bp in length was 49-50 bp shorter than ITS 2 region. Of 510 sites in the ITS 1 and 2 regions, 148 sites were potentially variable, of which 52% and 48% sites were distributed in ITS 1 and ITS 2 regions, respectively. By pairwise comparisons on the nucleotide sequences in the ITS 1 and 2 regions among 9 mulberry varieties, they were classified into 5 groups. Divergence values of the sequences, however, were considerably low ranging from 0 to 1.3%. Especially, there was no divergence among Backasipmunja, Chungilppong and Milsungpong and Jungyasang, Ssarigol II and Yulbon, respectively.

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Chemotaxonomic Study on the Genus Viola in Jeju Island (제주도산 제비꽃속의 성분 분류학적 연구)

  • 김창민
    • Journal of Plant Biology
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    • v.23 no.3_4
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    • pp.85-90
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    • 1980
  • The chemical affinities among 12 species of Viola from Jeju Island are investigated by thin-layer chromatography for their MeOH soluble and aglycon parts. They are classified into three groups which are closely related to those of morphological classification: the first allience-Viola hirtipes, V. chaerophylloides, V. meta-japonica, V. keiskei var. okuboi and V. violacea; the second allience-V. xanthopetala, V. ovata-oblonga, V. acuminata var. acuminata and V. grypoceras; and the third allience-V. pachyrhiza, V. phalacrocarpa and V. mandshurica var. ciliata. The first allience consists of the species without stem which have PA value greater than 50% with one another. V. hirtipes and V. chaerophylloides show closer affinity among the taxa of this allience. The second allience consists of the species with stem, of which PA value are about 50%. The third allience consists of the species without stem which have PA values lower than 50% when compared with any other taxa.

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Analysis of effects of burning in grasslands with quantifying succession stages by life-history traits in Kirigamine, central Japan

  • Kato, Jun;Kawakami, Mihoko
    • Journal of Ecology and Environment
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    • v.36 no.1
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    • pp.101-112
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    • 2013
  • To quantitatively analyze the effects of burning, we conducted a vegetation survey in the grasslands in Kirigamine, central Japan. We classified each species into stages of succession based on the life-history traits of the species and defined the score of the species in each stand based on the classification. We weighted the scores with a v-value, the product of coverage and height in the quadrat, and summed them to calculate the index of dynamic status. With these indices, we were able to quantitatively compare the stands in the study area and discern minute differences between the stands with different lengths of restoration periods since the disturbance of burning. These indices correlated with the v-value of trees, suggesting that the disturbance of burning seemed to affect the trees in the stand. We then calculated the growth of the tree species Pinus densiflora to evaluate its contribution to the index of dynamic status.

Current Status of Phytoplasmas and their Related Diseases in Korea

  • Jung, Hee-Young;Win, Nang Kyu Kyu;Kim, Young-Hwan
    • The Plant Pathology Journal
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    • v.28 no.3
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    • pp.239-247
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    • 2012
  • Phytoplasmas have been associated with more than 46 plant species in Korea. Several vegetables, ornamentals, fruit trees and other crop species are affected by phytoplasma diseases. Six 16Sr groups of phytoplasmas have been identified and these phytoplasmas are associated with 63 phytoplasma diseases. Aster yellows phytoplasmas are the most prevalent group and has been associated with more than 25 diseases in Korea. Jujube witches' broom, paulownia witches' broom and mulberry dwarf diseases cause economic losses to host trees throughout the country. So far, Korean phytoplasmas belong to six species of 'Candidatus Phytoplasma'; 'Ca. P. asteris', 'Ca. P. pruni$^*$', 'Ca. P. ziziphi', 'Ca. P. trifolii', 'Ca. P. solani$^*$' and 'Ca. P. castaneae'. The diseases are distributed throughout the country and most of them were observed in Gyeongbuk and Chonbuk provinces. At least four insect vectors; Cyrtopeltis tenuis, Hishimonus sellatus, Macrosteles striifrons and Ophiola flavopicta have been identified for phytoplasma transmission.

Classification of the genus Petrostichus Bonelli from Korea (Coleoptera: Harpalidae) II. Three new species of the subgenus Feroperis Lafer (한국신 길쭉먼지벌레속의 분류 (딱정벌레목 : 먼지벌레과) 2. Feroperis 아속의 3신종에 대하여)

  • 박종균;권용정
    • Korean journal of applied entomology
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    • v.35 no.1
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    • pp.1-6
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    • 1996
  • The pterostichid ground beetles of the subgenus Feroperis Later from Korea are revised here. Among them, three new species are described: Pterostichus rasilis sp. nov., P. seungmoi sp. novo and P. probus sp. novo Thus, totally four species of the subgenus are known to Korean fauna. The identification key and distribution data for each species are provided.

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Classification of the Scolytidae and Platypodidae Intercepted from Imported Timbers III (수입재해충 나무좀류의 분류 III 나무좀과와 긴나무좀과)

  • Choo H.Y.;Woo K.S.
    • Korean journal of applied entomology
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    • v.22 no.1 s.54
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    • pp.34-41
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    • 1983
  • The twelve species of Scolytidae and six species of Platypodidae were recognized from imported logs at Incheon, Gunsan and Busan ports. One species, Hypothenemus hampei (Ferrari) of Scolytidae was identified from coffee bean. These species were not reported before from imported logs and seeds. Scolytidae Platypodidae Scolytus frontalis Blandford Crossotarsus nitens Chapuis Hylurgopsl gabratus Zetterstedt P. lepidus Chapuis Gnathotricus sulcatus (Leconte) Diapus quinquespinatus Chapuis Hypothenemus hampei (Ferrari) Genyocerus abdominalis Schedi Ips concinuus (Mannerheim) G. compactus Schedl Poecilips subcribrosus (Blandford) G. sexporus (Schedl) xyleborus agnatus Eggers X. cognatus Blandford X. emarginatus Eichnoff X. mascarensis Eichhoff X. pseudomajor Schedl X. pseudopilifer Schedl.

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Classification of the genus Pterostichus Bonelli From Korea (Coleoptera: Harpalidae) III. A new species of the subgenus Phaenoraphis Tschitscherine (한국산 길쭉먼지벌래의 속의 분류 (딱정벌레목: 먼지벌레과) 3. Phaenorahis 아속의 1신종)

  • Park, Jong-Kyun;Kwon, Youg-Jung
    • Korean journal of applied entomology
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    • v.35 no.2
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    • pp.101-103
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    • 1996
  • The pterostichid ground beetles of the subgenus Phaenoraphis TschitschQine from Korea are revised here. A new species, Pterostichus peninsularis sp. nov., is described. Thus, totally two species of the subgenus are known to Korean fauna. The identification key and distribution data for each species are provided.

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Environmental Gradient Analysis of Forest Vegetation of Mt. Naejang, Southwestern Korea (내장산 삼림식생의 환경경도분석)

  • 김정언
    • Journal of Plant Biology
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    • v.31 no.1
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    • pp.33-39
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    • 1988
  • The environmental gradient analyses were aplied for the ordination of forest vegetation in Mt. Naejang national park area in Korea. The species population sequence along soil moisture gradient, mesic to xeric, was shown in following order: Zelkova serrata, Celtis sinensis, Lindera erythrocarpa, Cornus controversa, Acer mono, Carpinus tschonoskii, Quercus aliena, Daphniphyllum macropodum, Torreya mucifera, Carpinus laxiflora, Quercus serrata, Quercus variabilis, Quercus mongolica and Pinus densiflora in tree species and Acer pseudo-siebolidianum var. koreanum, Lindera obtusiloba, Styrax obassia, Styrax japonica, Acer pseudo-sieboldianum and Rhododendron schlippenbachii in shrub species. Ten ecological groups of tree were grouped and coincided with the vegetational units in phytosociological classification by Z-M method, associations. Four vegetation types, cove forest with Zelkova serrata and Lindera erythrocarpa, hornbeam forest with Carpinum laxiflora and Carpinum tschonoskii, oak forest with Quercus variabilis and Quercus mongolica and pine forest with Pinus densiflora as the dominant species were separated in mosaic chart by the two dimensional analyses of elevation and soil moisture gradient.

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Characterizations of five heterotrophic nanoflagellates newly recorded in Korea

  • Jeong, Dong Hyuk;Park, Jong Soo
    • Journal of Species Research
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    • v.10 no.4
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    • pp.356-363
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    • 2021
  • Heterotrophic nanoflagellates (HNFs, 2-20 ㎛ in size) are substantially capable of controlling bacterial abundance in aquatic environments, and microbial taxonomists have studied ecologically important and abundant HNFs for a long time. However, the classifications of HNFs have rarely been reported in Korea on the basis of morphology and 18S rDNA sequencing. Here, previously reported five HNFs from non-Korean habitats were isolated from Korean coastal seawater or intertidal sediments for the first time. Light microscopic observations and 18S rDNA phylogenetic trees revealed that the five isolated species were Cafeteria burkhardae strain PH003, Cafeteria graefeae strain UL001, Aplanochytrium minuta (formerly Labyrinthuloides minuta) strain PH004, Neobodo curvifilus strain KM017 (formerly Procryptobia sorokini), and Ancyromonas micra (formerly Planomonas micra) strain IG005. Being morphologically and phylogenetically indistinct from its closest species, all isolates from Korea were therefore regarded as identical species detected in other countries. Thus, this result indicates an expansion of known habitats that range from those of the five isolates in natural ecosystems on Earth.

A study for Improvement the Accuracy of Tree Species Classification within Various Sizes of Training Sample Areas by Using the High-resolution Images (고해상도 영상을 이용한 샘플영역의 크기별 수종분류 정확도 향상을 위한 연구)

  • Hou, Jin Sung;Yang, Keum Chul
    • Journal of Wetlands Research
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    • v.16 no.3
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    • pp.393-401
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    • 2014
  • The purpose of this study was to investigate the objective impact in accuracy and reliability with tendency depend on training samples by using the high-resolution images. Supervised classification was performed based on multi-spectral images which made by each satellite and aerial images for considering all of bands' characteristics. The highest accuracy was 84.7% with satellite image(3*3) and 83% with aerial image(5*5) at the accuracy verification phase. Also, the overall accuracy with the consideration of Kappa coefficient were 0.84 for satellite images and 0.82 for aerial images. In all of the images, the smaller training sample was, the higher accuracy showed. Therefore, tree species classification accuracy was tended to rely on training sample size.