• 제목/요약/키워드: Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE)

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Characterization of Fibrinolytic Proteases from Gloydius blomhoffii siniticus Venom

  • Choi, Suk-Ho
    • 대한약침학회지
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    • 제14권3호
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    • pp.71-79
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    • 2011
  • Objectives : This study was undertaken to identify fibrinolytic proteases from Gloydius blomhoffii siniticus venom and to characterize a major fibrinolytic protease purified from the venom. Methods : The venom was subjected to chromatography using columns of Q-Sepharose and Sephadex G-75. The molecular weights of fibrinolytic proteases showing fibrinolytic zone in fibrin plate assay were determined in SDS-PAGE (Sodium dodecyl sulfate-polyacrylamide gel electrophoresis) The effects of inhibitors and metal ions on fibrinolytic protease and the proteolysis patterns of fibrinogen, gelatin, and bovine serum albumin were investigated. Results : 1) The fibrinolytic fractions of the three peaks isolated from Gloydius blomhoffii siniticus venom contained two polypeptides of 46 and 59 kDa and three polypeptides of 32, 18, and 15 kDa and a major polypeptide of 54 kDa, respectively. 2) The fibrinolytic activity of the purified protease of 54 kDA was inhibited by metal chelators, such as EDTA, EGTA, and 1,10-phenanthroline, and disulfhydryl-reducing compounds, such as dithiothreitol and cysteine. 3) Calcium chloride promoted the fibrinolytic activity of the protease, but mercuric chloride and cobalt(II) chloride inhibited it. 4) The fibrinolytic protease cleaved preferentially A${\alpha}$-chain and slowly B${\beta}$-chain of fibrinogen. It also hydrolyzed gelatin but not bovine serum albumin. Conclusions : The Gloydius blomhoffii siniticus venom contained more than three fibrinolytic proteases. The major fibrinolytic protease was a metalloprotease which hydrolyzed both fibrinogen and gelatin, but not bovine serum albumin.

김치로부터 담즙산 분해능이 우수한 Lactobacillus plantarum CIB 001의 분리 및 동정 (Isolation and Identification of Lactobacillus plantarum CIB 001 with Bile Salt Deconjugation Activity from Kimchi)

  • 차상도;김태운;이동희
    • 한국미생물·생명공학회지
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    • 제38권2호
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    • pp.222-226
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    • 2010
  • This study was carried out to isolate and characterize the Lactobacillus plantarum with bile salt deconjugation activity that was isolated from Kimchi. Some isolates were selected and identified as L. plantarum by 16S rRNA gene sequence and sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) analysis of whole cell protein patterns. They were assayed to determine their capacities to express bile salt hydrolase (BSH) activity. Among the identified strains, L. plantarum CIB 001 showed the highest level of BSH activity. Then, resistance to gastric acidity and bile condition were analyzed for further characterization. This strain was able to maintain viability for 1h at pH 2.0 and to survive in a MRS (deMan, Rogosa, and Sharpe) broth with 1.0% of bile acids. L. plantarum CIB 001 would potentially be useful in the food industry as probiotics.

능성어(Epinephelus septemfasciatus) immunoglobulin M에 대한 단클론 항체 생산 (Production of monoclonal antibodies to immunoglobulin M of sevenband grouper (Epinephelus septemfasciatus))

  • 김시우;김종오;공경희;오명주;김위식
    • 한국어병학회지
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    • 제34권1호
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    • pp.111-115
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    • 2021
  • Immunoglobulin M (IgM) of sevenband grouper (Epinephelus septemfasciatus) was purified by mannan-binding protein (MBP) affinity column. The purified IgM had an apparent molecular weights of 76 (heavy chain) and 28 (light chain) kDa in sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). Eight hybridoma clones secreting monoclonal antibodies (mAbs) against sevenband grouper IgM were established. Antibody detection enzyme-linked immunosorbent assay (ELISA) with bovine serum albumin (BSA, antigen) and the 8 mAbs revealed that optical density (OD) values were clearly different between sera from BSA-immunization and non-immunization of sevenband grouper. These results suggest that the produced mAbs in this study are specifically reacted with IgM of sevenband grouper.

Characterization of NAD-Dependent Formate Dehydrogenase from Trametes versicolor Using a Cell-Free Protein Expression System

  • LEE, Su-Yeon;JANG, Seokyoon;LEE, Soo-Min
    • Journal of the Korean Wood Science and Technology
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    • 제50권3호
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    • pp.159-166
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    • 2022
  • CO2 emissions are the primary reason for global warming; hence, biological and chemical technologies for converting CO2 into useful compounds are being actively studied. Biological methods using enzymes can convert CO2 under mild conditions. Formate dehydrogenase (FDH) is a representative CO2 conversion enzyme. Its function was revealed after isolation from bacteria, yeast, and plants. In this study, we evaluated the CO2 conversion potential of FDH isolated from wood-rotting fungi. After isolating the FDH gene (TvFDH) from Trametes versicolor, we cloned the full-length FDH from T. versicolor and expressed it in a cell-free expression system. The gene encoding TvFDH was identified as 1,200 bp open reading frame (ORF) and the expected molecular weight of the protein was approximately 42 kDa. Overexpression of the recombinant crude protein including TvFDH was confirmed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). Enzyme activities and metabolite analyses confirmed the efficiency of TvFDH for CO2 reduction.

InhA-Like Protease Secreted by Bacillus sp. S17110 Inhabited in Turban Shell

  • Jung, Sang-Chul;Paik, Hyoung-Rok;Kim, Mi-Sun;Baik, Keun-Sik;Lee, Woo-Yiel;Seong, Chi-Nam;Choi, Sang-Ki
    • Journal of Microbiology
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    • 제45권5호
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    • pp.402-408
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    • 2007
  • A strain producing a potent protease was isolated from turban shell. The strain was identified as Bacillus sp. S17110 based on phylogenetic analysis. The enzyme was purified from culture supernatant of Bacillus sp. S17110 to homogeneity by ammonium sulfate precipitation, SP-Sepharose, and DEAE-Sepharose anion exchange chromatography. Protease activity of the purified protein against casein was found to be stable at pH 7 to pH 10 and around $50^{\circ}C$. Approximately 70% of proteolytic activity of the enzyme was detected either in the presence of 100 mM SDS or Tween 20. The enzyme activity was enhanced in the presence of $Ca^{2+},\;Zn^{2+},\;Mg^{2+}$, but was inhibited by EDTA, indicating that it requires metal for its activity. The purified enzyme was found to be a monomeric protein with a molecular mass of 75 kDa, as estimated by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and gel filtration chromatography. The purified enzyme was analyzed through peptide fingerprint mass spectra generated from matrix-assisted laser desorption ionization-time-of-flight-mass spectrometry (MALDI-TOF-MS) and a BLAST search, and identified as immune inhibitor A (inhA) deduced from nucleotide sequence of B. cereus G9241. Since InhA was identified as protease that cleave antibacterial proteins found in insect, inhA-like protease purified from Bacillus sp. S17110 might be pathogenic to sea invertebrates.

Pseudomonas sp. KP-364가 생산하는 Keratinolytic Pretense의 정제 및 성질 (Purification and some Properties of Keratinolytic Protease Produced by Pseudomonas sp. KP-364.)

  • 전동호;강상모;권태종
    • 한국미생물·생명공학회지
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    • 제31권3호
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    • pp.224-229
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    • 2003
  • 경기도 일대의 가금류 공장부근 토양로부터 keratinolytic protease 생산성이 우수한 균주 KP-364를 선별하여 본 효소를 정제하고 일반적인 특성을 조사하였다. 본 효소는 ulkafiltration, ammonium sulfate fiactionation, DEAE-cellulose ion-exchange chromatography, Sephadex G-150 gel filtration 등을 통하여 정제되었으며 회수율은 25.2%이었다 SDS-PAGE와 gel filtration으로. 단일성과 분자량을 추정한 결과 전기영동 상에 단일 band를 나타내었으며 분자량은 약 36,000 dalton이였으며 1개의 subunit로_구성되어 있었다. 효소반응의 최적조건을 검토한 결과 최적 pH는 6.5, pH 3.0에서 10.0까지 90%이상의 활성을 나타냈으며 반응 최적 온도는 $37^{\circ}C$이였고 $60^{\circ}C$에서 1시간동안 80%이상의 활성을 유지하였다. 정제된 효소의 활성은$ FeSo_4$, KCI, $Li_2$$SO_4$를 첨가하였을 때 증가하였으며 $Ag_2$$SO_4$, $CuCl_2$, $HgCl_2$에 의해 저해되었다. 또한 EDTA, EGTA에 의해 저해되는 것으로 보아 metalloprotease의 일종이라고 판단되며 $Li^{ +}$를 cofactor로 함유하고 있는 것으로 조사되었다.

Serratia marcescens JM에 의한 Chitinase의 정제와 특성 (Purification and Some Properties of Chitinase from Serratia marcescens JM)

  • 이상환;유의경
    • 대한화학회지
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    • 제40권1호
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    • pp.72-80
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    • 1996
  • Chitinase를 생성하는 세균인 serratia marcescens JM을 해안 갯벌 시료로부터 분리하여, ammonium sulfate precipitation, affinity adsorption, hydroxylapatite와 Sephadex G-200 column chromatography를 통하여 정제하였다. 정제된 chitinase는 7.1% 회수율과 4.22의 정제도를 나타내었으며, 전기영동시 단일밴드를 얻을 수 있었고, SDS-PAGE에 의해 측정된 분량은 59,000으로 나타났다. 정제된 chitinase의 $K_m$$V_{max}$는 5.71mg/mL과 39.8 unit/mL로 나타났다. Chitinase의 최적활성 pH와 온도는 7과 50$^{\circ}C$였고 최적안정pH는 7.0이며 50$^{\circ}C$이하에서는 안정하였다. $Cu^{2+}\;Ca^{2+}$$Mg^{2+}$는 효소활성을 증가시켰으나 $Hg^{2+}$$I_2$는 효소 활성을 억제시켰다. 또한 cysteine은 효소활성을 증가시키나 EDTA, MIA, PCMB, 및 SDS는 효소활성을 억제시켰다. 해수 음이온 중 $MG^{2+},\;Ca^{2+},\;K^+$는 효소활성을 약간 증가시켰으나 $Na^{2+}$ 이온은 1mM이상농도에서 활성이 억제되었다. 본 논문에서 정제된 chitinase는 여러가지 특이점이 있는 serratia효소였다.

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Honey Bee Venom (Apis mellifera) Contains Anticoagulation Factors and Increases the Blood-clotting Time

  • Zolfagharian, Hossein;Mohajeri, Mohammad;Babaie, Mahdi
    • 대한약침학회지
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    • 제18권4호
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    • pp.7-11
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    • 2015
  • Objectives: Bee venom (BV) is a complex mixture of proteins and contains proteins such as phospholipase and melittin, which have an effect on blood clotting and blood clots. The mechanism of action of honey bee venom (HBV, Apis mellifera) on human plasma proteins and its anti-thrombotic effect were studied. The purpose of this study was to investigate the anti-coagulation effect of BV and its effects on blood coagulation and purification. Methods: Crude venom obtained from Apis mellifera was selected. The anti-coagulation factor of the crude venom from this species was purified by using gel filtration chromatography (sephadex G-50), and the molecular weights of the anti-coagulants in this venom estimated by using sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). Blood samples were obtained from 10 rabbits, and the prothrombin time (PT) and the partial thromboplastin time (PTT) tests were conducted. The approximate lethal dose (LD) values of BV were determined. Results: Crude BV increased the blood clotting time. For BV concentrations from 1 to 4 mg/mL, clotting was not observed even at more than 300 seconds, standard deviations $(SDs)={\pm}0.71$; however, clotting was observed in the control group 13.8 s, $SDs={\pm}0.52$. Thus, BV can be considered as containing anti-coagulation factors. Crude BV is composed 4 protein bands with molecular weights of 3, 15, 20 and 41 kilodalton (kDa), respectively. The $LD_{50}$ of the crude BV was found to be $177.8{\mu}g/mouse$. Conclusion: BV contains anti-coagulation factors. The fraction extracted from the Iranian bees contains proteins that are similar to anti-coagulation proteins, such as phospholipase $A_2(PLA_2)$ and melittin, and that can increase the blood clotting times in vitro.

Immunoblot technique을 이용한 폐흡충의 발육단계별 항원 특이성 분석 (Analysis of antigenic specificities of Puragonimus westeymuni developmental stages using immunoblot technique)

  • 주경환;홍성철
    • Parasites, Hosts and Diseases
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    • 제27권1호
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    • pp.1-8
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    • 1989
  • 폐흡충증의 진단은 객담검사법이 가장 확실한 진단 방법이기는 하지만 폐흡충이 폐에 기 생한 경우에도 충란 검출이 어려울 때가 있으므로 혈청학적 진단법이 이용되고 있다. 혈청학적 진단법에 사용되는 항원인 기생충 추출물, 즉 조항원은 분류학적으로 유사한 기생충과 서로 공유하고 있는 공통 항원 때문에 교차 반응을 일으키는 경우가 있다. 이 연구는 발육단계 별 폐흡충에서 만든 조항원을 SDS-PAGE(sodium dodecyl sulfate polyacrylamide gel electrophoresis)로 전기영동한 다음 EITB(enzyme-linked immunoelectrotransfer blot)를 이용하여 항원대별 항원성 및 특이성을 관찰하여 시기별로 채취한 고양이 혈청에 대한 특이 반응대를 관찰해 보고자 시행하였다. 실험에 사용한 항원은 실험적으로 고양이에 감염시켜 3, 5, 8및 12주 만에 얻은 폐흡충의 식염수 추출액 (SEPn; n=감염된 시기)이며 3∼20% linear gradient gel에서 SDS-PAGE하였다. Silver stain결과 폐흡충 조항원은 최소한 30개 이상의 band들로 구성되어 있었는데 각 발육단계 에 공통된 항원대로 203, 63, 35, 21, 19, 13 kDa band들이 관찰되었고, 단계별로 차이점도 관찰 되었다. SEPl2에서는 새로운 229 kDa band가 관찰되었다. 주요 항원대에 대하여 EITB를 한 결과 각 항원과 감염 후 5주 이상 된 혈청과 공통적으로 반응한 항원대는 203, 115, 91, 85, 67, 63, 48, 39, 35 및 25 kDa band들이었고, 8주 이상 된 혈청과의 반응에서는 19, 13및 10 kDa 항원대와 공통적으로 일관성 있게 반응하였다. SEP12는 12주 된 혈청과 229 kDa에서 특이하게 반응하였다.

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Biochemical and Genetic Variation of Hordein Subunits in Korean Barley

  • Lee, Sung-Shin;Kim, Jin-Baek;Kim, Dong-Sub;Nam, Jung-Hyun;Kim, Jae-Chul;Kim, Chung-Kon;Hong, Byung-Hee;Seo, Yong-Weon
    • 한국작물학회지
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    • 제46권2호
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    • pp.100-105
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    • 2001
  • One-dimensional sodium dodecyl sulfate polyacrylamide gel electrophoresis (1D SDS-PAGE) was used to determine whether it would provide improved resolving power of hordein proteins concomitant with improved identification of Korean barley cultivars and germplams. This system gave rapid and reproducible separations of hordein polypeptides. Total fourteen of clear and easily scorable subunits were identified in Korean barley cultivars and germplasms and their polymorphic constitutions could provide biochemical genetic information in progeny analysis and endosperm quality improvement in barley breeding programs. Each hordein polypeptides residing in B, C, and D hordein pattern designations were scored to prepare a cultivar catalogue of protein patterns. On the basis of this character, 7 hordein polypeptide patterns were constructed from 108 barley cultivars and experimental lines. The molecular weight of hordein subunits in Korean barley cultivars and experimental lines varied in the range of 98 to 48 kDa. In contrast, less polymorphic hordein polypeptides were found in the low protein barley lines including malting barleys than those found in Korean barley cultivars and experimental lines.

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