• Title/Summary/Keyword: Shannon species diversity index

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Diversity of Arbuscular Mycorrhizal Fungi in Rhizospheres of Camellia japonica and Neighboring Plants Inhabiting Wando of Korea (전남 완도에 서식하는 동백나무와 그 주변 식물의 근권에 분포하는 수지상균근균의 다양성)

  • Lee, Eun-Hwa;Ka, Kang-Hyeon;Eom, Ahn-Heum
    • The Korean Journal of Mycology
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    • v.42 no.1
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    • pp.34-39
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    • 2014
  • In this study, the community structures of arbuscular mycorrhizal fungi (AMF) in rhizospheres of Camellia japonica and neighboring woody plants in Wando, Korea were investigated. Rhizospheres of C. japonica and other woody plants were dominated by the same species, Acaulospora mellea, but Shannon's index, species richness and total spore numbers of the AMF communities were higher in non-C. japonica than in neighboring plants. Regardless of host plant species, the frequency of A. mellea was significantly high comparing with other AMF species. The community similarity of AMF within C. japonica was significantly higher than between C. japonica and neighboring plants or neighboring plants (p<0.005). Results showed that AM fungal communities in rhizospheres of C. japonica have unique community structure and are different from that of neighboring host plants, suggesting that community structure of AMF could be influenced by host plant species.

Ectomycorrhizal Fungal Diversity on Abies korea and Taxus cuspidata at Two Altitudes in Mt. Halla (고도에 따른 한라산 구상나무와 주목의 외생균근균 다양성 비교)

  • Lee, Ji-Eun;Eom, Ahn-Heum
    • The Korean Journal of Mycology
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    • v.47 no.3
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    • pp.199-208
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    • 2019
  • In this study, the community structures of the ectomycorrhizal (ECM) fungi in the roots of Abies koreana and Taxus cuspidata were investigated at different altitudes of Mt. Halla. We identified the collected ECM root tips based on morphological characteristics and phylogenetic analysis through sequencing of the rDNA ITS regions. From the roots of A. koreana and T. cuspidata, 11 species and 12 species were identified, respectively. The Shannon's index and species evenness and abundance of the ECM fungi were higher in the higher than lower regions, regardless of host plant species, however, the number of ECM root tips showed the opposite pattern. The community similarity among the ECM fungi in A. koreana was significantly higher than that among the ECM fungi in T. cuspidata or than that between A. koreana and T. cuspidata (p < 0.05). These results could be useful for the conservation and management of the habitat of A. koreana, which is threatened with extinction due to increasing ambient air temperature.

Phytoplankton of the Coastal Waters of Vladivostok (the North-western Part of the East Sea) under Eutrophic Conditions

  • Stonik, I.V.;Orlova, T.Yu.
    • Ocean and Polar Research
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    • v.24 no.4
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    • pp.359-365
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    • 2002
  • The qualitative and quantitative composition of the phytoplankton of the coastal waters off Vladivostok during the period 1991-1994 was studied. The following trends in the phytoplankton composition with decreasing distance from the source of eutrophication were revealed: 1) total density and bio-mass increased; 2) the density of the diatom Skeletonema costatum, which reflects a decrease in the Shannon-Weaver species diversity index during the summer microalgal bloom, increased significantly; and 3) the density of the non-diatom component of the phytoplankton increased.

The benefit of one cannot replace the other: seagrass and mangrove ecosystems at Santa Fe, Bantayan Island

  • Mendoza, Ayana Rose R.;Patalinghug, Jenny Marie R.;Divinagracia, Joshua Ybanez
    • Journal of Ecology and Environment
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    • v.43 no.2
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    • pp.183-190
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    • 2019
  • Background: In the Philippines, the practice of planting mangroves over seagrass has been a practice done to promote coastline protection from damages done by storms. Despite the added protection to the coastline, the addition of an artificial ecosystem gradually inflicts damage to the ecosystem already established. In this study, seagrass communities that had no history of mangrove planting were compared with those that had mangrove planting. The percent substrate cover of seagrass in the sampling areas was determined, and the macroinvertebrates present in the sampling areas were also observed. The study was conducted based on reports of mangrove planting activity that disrupted seagrass functions on Santa Fe, Bantayan Island, Cebu. Transect-quadrat method sampling was done to assess the chosen sites. Results: Six species of seagrass was found on the site without mangrove planting which was barangay Ocoy (Cymodocea sp., Thalassia sp., Halodule sp., Enhalus sp., Halophila sp., and Syringodium sp.) and had a higher percent cover, while only four were found on the site with mangrove planting (barangay Marikaban). It was also found that barangay Marikaban had a lesser Shannon-Wiener and Simpson's index compared to barangay Ocoy. Jaccard's index of similarity between the two sites was low. Conclusion: With the results of the assessment, we recommend proper monitoring of future mangrove planting activities and that these activities should not disrupt another ecosystem as all ecosystems are important.

Characterization of Weed Occurrence in Apple Orchards (사과 과수원(果樹園)에서의 잡초발생(雜草發生) 특성(特性)에 관(關)한 연구(硏究))

  • Woo, I.S.;Pyon, J.Y.
    • Korean Journal of Weed Science
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    • v.8 no.2
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    • pp.164-168
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    • 1988
  • In order to get basic information for establishing weed control methods in apple orchards, weed distribution was surveyed at 2 locations in Chungnam Province at 15 days intervals. In apple orchard 48 weed species (18 families) were distributed and Chenopodium album and Polygonum hydropiper were dominated and Digitana sanguinalis, Portulaca oleracea, and Erigeron canadensis were also abundant among them. Highest number of weeds emerged in April and dry weight of weeds were heavy in June and October, especially in summer broadleaf weeds and winter broadleaf weeds, and winter grasses were abundant in spring. Seasonal Shannon's diversity index(H'), maximum diversity(H max'), eveness (J') for the Shannon diversity index, and Simpson index were high in apple orchards. Interspecific competition was more severe than intraspecific competition.

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A Study for Plant Community Structure Analysis in Sangwonsa(Temple) Valley, Yongmunsan(Mt.) (용문산 상원사계곡 식물군집구조 분석)

  • Kim, Jong-Yup;Ki, Kyong-Seok;Min, Geon-Young
    • Korean Journal of Environment and Ecology
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    • v.26 no.5
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    • pp.758-769
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    • 2012
  • This study is aimed at analyzing the structural characteristics of vegetation in the Sangwonsa(Temple) valley, Yongmunsan(Mt.), and to collect basic data for research of large mountains which are located in the temperate, central region. The research on the entire vegetation struc trees are distributed over a wide area, accounting for 75.0% of theture of Sangwonsa(Temple) valley observed that oak total vegetation in the area. We examined 17 plots(unit area: $400m^2$) in the deciduous forest, dividing the trees into 5 community types based on the average important value. The 5 community types are as follows: A mixed dominant group of Carpinus laxiflora and Quercus serrata, a mixed dominant group of Quercus serrata and Quercus variabilis, a mixed dominant group of Quercus mongolica and Quercus serrata, a dominant group of Quercus serrata, a dominant group of Acer pictum supsp. mono. It is expected that the oak trees competing with Carpinus laxiflora and Acer pictum supsp. mono would flourish in a deciduous forest. The Shannon's species diversity index(H') was 0.3708~1.3083.

Genetic diversity of Forsythia ovata Nakai (Oleaceae) based on inter-simple sequence repeats (ISSR) (ISSR 자료에 기초한 만리화(물푸레나무과)의 유전적 다양성)

  • Kim, Sang-Yong;Kim, Young-Dong;Kim, Jin-Seok;Yang, Byeong-Hoon;Kim, Sung-Hee;Lee, Byung-Chun
    • Korean Journal of Plant Taxonomy
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    • v.39 no.1
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    • pp.48-54
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    • 2009
  • We investigated the genetic diversity of an endemic rare species, Forsythia ovata Nakai by examining 93 ISSR amplicons in 84 individuals distributed among five populations. The overall percentage of polymorphic ISSR amplicons was 54.8% and mean number of amplicons per ISSR primer was 6.6. The amount of genetic diversity was relatively lower than other shrub species. The Mt. Seokbyeong and Mt. Seorak B populations had the highest level of genetic diversity. Although the Seokgae-jae population had the lowest level of genetic diversity, the population was genetically the most distinctive from the other populations. About 30.6% of the total variation was allocated between five populations, which was slightly higher than other shrub species. Such a pattern of genetic variation may have resulted from the limited distribution and small population sizes of F. ovata. The UPGMA dendrogram based on Nei's genetic distance showed some decisive geographic patterns. These results suggest that, in addition to the preservation of the natural stands, the conservation of larger number of populations with small number of individuals per population is more effective for the dynamic ex situ conservation and for maintaining the genetic diversity of F. ovata than smaller number of populations with large number of individuals.

Ecological characteristics of areas naturally inhabited by Dolbae trees(Pyrus pyrifolia) on Mt. Kaya

  • Ahn, Young-Hee;Chung, Kyu-Hwan
    • Journal of Environmental Science International
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    • v.11 no.11
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    • pp.1149-1156
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    • 2002
  • The ecological characteristics of Dolbae trees, a valuable genetic resource for native pyrus fruit trees, were investigated at four naturally inhabited areas on Mount Kaya, Gyeongsangnam-Do. Most Dolbae trees were found on the southwest side of an old hiking path to a mountain valley at altitudes of 610∼670 m. The surrounding flora consisted of 46 families, 69 genera, 75 species, and 10 varieties. The natural habitat of the Dolbae trees was basically a deciduous broad-leaved forest with a predominance of Quercus serrata and ligneous plants(xylophytes) from the Fagaceae and Betulaceae families. The habitat was also found to be in a second transition resulting from forest disturbance and exhibited a degree of diversity of 2.901-5.065, based on Shannon-Weiner's index. Examination of the Dolbae trees found in Mount Kaya revealed diameter breast heights(DBHs) ranging from 10 to 60 cm, including six old and large Dolbae trees with a DBH of 50∼60 cm, which will be particularly valuable as a genetic resource. Accordingly, the current results suggest that the study areas are a secondary forest in a typical mid-temperate zone resulting from forest damage about 10 years earlier.

Ecological characteristics and distribution of Chuiangne (Pyrus ussuriensis var. acidula) at habitats (자생 취앙네(Pyrus ussuriensis var. acidula) 분포와 생태적 특성)

  • 안영희;송종석;조동광;이철호
    • Korean Journal of Plant Resources
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    • v.15 no.2
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    • pp.96-106
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    • 2002
  • Five major naturally populated habitats around the Mt. Daeduk, Gangwon province for wild Chuiangne (Pyrus ussuriensis var. acidula) are mostly located on the southeast side of the mountains at 1,216-1,306m in altitude at sea level and are in very good sunney areas. The total of 96 taxa dividing into 40 families, 79 genera 84 species and 12 varieties have in these areas. Most of these plants are heliophytes, which love sunshine, Compositaes such as Artemisia stolonifera, Synurus deltoides, or Rosaceaes like Potentilla fragarioides var. major are also shown. These areas have been unknown destroyed, so it is possibly thought the second transition has been progressed. The index of species diversity of plant groups in these areas is 4.715-5.270 based on the Shannon-Wiener's method. The wild Chuiangne with 34.15%, which are 5-10㎝ DBH, have been found in habitats. The vegetation around the habitats must be managed by the man in order to keep sound growth of the wild Chuiangne.

Subsequent application of self-organizing map and hidden Markov models infer community states of stream benthic macroinvertebrates

  • Kim, Dong-Hwan;Nguyen, Tuyen Van;Heo, Muyoung;Chon, Tae-Soo
    • Journal of Ecology and Environment
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    • v.38 no.1
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    • pp.95-107
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    • 2015
  • Because an ecological community consists of diverse species that vary nonlinearly with environmental variability, its dynamics are complex and difficult to analyze. To investigate temporal variations of benthic macroinvertebrate community, we used the community data that were collected at the sampling site in Baenae Stream near Busan, Korea, which is a clean stream with minimum pollution, from July 2006 to July 2013. First, we used a self-organizing map (SOM) to heuristically derive the states that characterizes the biotic condition of the benthic macroinvertebrate communities in forms of time series data. Next, we applied the hidden Markov model (HMM) to fine-tune the states objectively and to obtain the transition probabilities between the states and the emission probabilities that show the connection of the states with observable events such as the number of species, the diversity measured by Shannon entropy, and the biological water quality index (BMWP). While the number of species apparently addressed the state of the community, the diversity reflected the state changes after the HMM training along with seasonal variations in cyclic manners. The BMWP showed clear characterization of events that correspond to the different states based on the emission probabilities. The environmental factors such as temperature and precipitation also indicated the seasonal and cyclic changes according to the HMM. Though the usage of the HMM alone can guarantee the convergence of the training or the precision of the derived states based on field data in this study, the derivation of the states by the SOM that followed the fine-tuning by the HMM well elucidated the states of the community and could serve as an alternative reference system to reveal the ecological structures in stream communities.