• Title/Summary/Keyword: Selection Diversity

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A Relay and Transmission Mode Selection Scheme to Enhance the Bit Error Rate Performance in Relay Systems (중계기 시스템에서 비트 오류율 성능 향상을 위한 중계기 선택 및 전송 모드 결정 방법)

  • Seo, Jong-Pil;Lee, Myung-Hoon;Lee, Yoon-Ju;Kwon, Dong-Seung;Chung, Jae-Hak
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.36 no.12A
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    • pp.941-949
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    • 2011
  • In a cooperative communication system with a source node and multiple relays equipping single antenna and a destination node equipping multiple antennas, the selective cooperative spatial multiplexing scheme can obtain spatial multiplexing gain and additional selection diversity gain. But it can degrade a bit error rate performance because some received symbols forwarded from particular relays may be lost by attenuation due to path-loss. We propose a relay and transmission mode selection scheme which selects minimum number of multiple relays having the channel capacity larger than a given data rate and transmission mode which switches spatial multiplexing and spatial diversity mode in cooperation phase to enhance the bit error rate performance. The proposed scheme achieves 1.5~2dB gain at the low SNR range compared with the conventional scheme by obtaining additional spatial diversity gain.

Genetic Diversity of Angelica gigas Nakai Collected in Korea using Genome-Wide SSR Markers (Genome-Wide SSR 마커를 이용한 주요 산지별 참당귀의 유전다양성 분석)

  • Jeong, Dae Hui;Park, Yun Mi;Kim, Ki Yoon;Park, Hong Woo;Jeon, Kwon Seok;Kim, Mahn Jo;Gil, Jin Su;Lee, Yi;Um, Yurry
    • Korean Journal of Medicinal Crop Science
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    • v.27 no.6
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    • pp.376-382
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    • 2019
  • Background: Angelica gigas Nakai has been used as an herbal medicine in Eastern Asia for treating disorders in women for a long time. To date there are no studies on the genetic diversity of A. gigas. The present study aimed to study the genetic diversity of A. gigas variants using genome-wide simple sequence repeat (SSR) markers. Methods and Results: The genetic diversity of 199 variants of A. gigas cultivated in of different regions, was analyzed using 5 genome-wide SSR markers. The results revealed that the genetic variants were very diverse, and genetic analysis using the 5 SSR markers revealed high diversity among the variants. Conclusions: It is expected that the development of the true Angleical cultivar, by studying the system and group selection, can be achieved by genetic analysis using the developed markers, for generating a genetically fixed lineage and group selection.

A Study on the Phase Diversity and Optimal I/Q Signal Combining Methods on a UHF RFID Receiver (UHF RFID 수신기의 위상 다이버시티 및 최적 I/Q 신호 결합 방법에 관한 연구)

  • Jang, Byung-Jun;Song, Ho-Jun
    • The Journal of Korean Institute of Electromagnetic Engineering and Science
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    • v.19 no.4
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    • pp.442-450
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    • 2008
  • In this paper, the phase diverisity in a direct-conversion receiver for a UHF RFID reader is analyzed and the optimal I/Q signal combining methods is presented with respect to tag modulation. At first, fading characteristics of a single channel receiver is shown to prove the importance of phase diversity due to the phase relationship between the backscattered signal and the local oscillator. And the optimal signal combining methods are presented in order to overcome the signal power reduction due to phase diversity. In case of ASK, the power combining method is presented for the optimal I/Q combining. And the arctangent and principal component combining methods using covariance matrix of I and Q channels are presented for the optimal I/Q combining in case of PSK. In order to analyze the performance of suggested methods, the selection diversity and the optimal combining methods are compared. According to analysis and simulation results, the optimal combining methods have a maximum 3 dB SNR enhancement than selection diversity.

Sequence Diversity of a Domesticated Transposase Gene, MUG1, in Oryza Species

  • Kwon, Soon-Jae;Park, Kyong-Cheul;Son, Jae-Han;Bureau, Thomas;Park, Cheul-Ho;Kim, Nam-Soo
    • Molecules and Cells
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    • v.27 no.4
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    • pp.459-465
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    • 2009
  • MUG1 is a MULE transposon-related domesticated gene in plants. We assessed the sequence diversity, neutrality, expression, and phylogenetics of the MUG1 gene among Oryza ssp. We found MUG1 expression in all tissues analyzed, with different levels in O. sativa. There were 408 variation sites in the 3886 bp of MUG1 locus. The nucleotide diversity of the MUG1 was higher than functionally known genes in rice. The nucleotide diversity (${\pi}$) in the domains was lower than the average nucleotide diversity in whole coding region. The ${\pi}$ values in nonsynonymous sites were lower than those of synonymous sites. Tajima D and Fu and Li $D^*$ values were mostly negative values, suggesting purifying selection in MUG1 sequences of Oryza ssp. Genome-specific variation and phylogenetic analyses show a general grouping of MUG1 sequences congruent with Oryza ssp. biogeography; however, our MUG1 phylogenetic results, in combination with separate B and D genome studies, might suggest an early divergence of the Oryza ssp. by continental drift of Gondwanaland. O. long-istaminata MUG1 divergence from other AA diploids suggests that it might not be a direct ancestor of the African rice species.

Incremental Antenna Selection Based on Lattice-Reduction for Spatial Multiplexing MIMO Systems

  • Kim, Sangchoon
    • Journal of Advanced Information Technology and Convergence
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    • v.10 no.1
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    • pp.1-14
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    • 2020
  • Antenna selection is a method to enhance the performance of spatial multiplexing multiple-input multiple-output (MIMO) systems, which can achieve the diversity order of the full MIMO systems. Although various selection criteria have been studied in the literature, they should be adjusted to the detection operation implemented at the receiver. In this paper, antenna selection methods that optimize the post-processing signal-to-noise ratio (SNR) and eigenvalue are considered for the lattice reduction (LR)-based receiver. To develop a complexity-efficient antenna selection algorithm, the incremental selection strategy is adopted. Moreover, for improvement of performance, an additional iterative selection method is presented in combination with an incremental strategy.

Genome-wide scans for detecting the selection signature of the Jeju-island native pig in Korea

  • Lee, Young-Sup;Shin, Donghyun;Won, Kyeong-Hye;Kim, Dae Cheol;Lee, Sang Chul;Song, Ki-Duk
    • Asian-Australasian Journal of Animal Sciences
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    • v.33 no.4
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    • pp.539-546
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    • 2020
  • Objective: The Jeju native pig (JNP) found on the Jeju Island of Korea is a unique black pig known for high-quality meat. To investigate the genetic uniqueness of JNP, we analyzed the selection signature of the JNP in comparison to commercial pigs such as Berkshire and Yorkshire pigs. Methods: We surveyed the genetic diversity to identify the genetic stability of the JNP, using the linkage disequilibrium method. A selective sweep of the JNP was performed to identify the selection signatures. To do so, the population differentiation measure, Weir-Cockerham's Fst was utilized. This statistic directly measures the population differentiation at the variant level. Additionally, we investigated the gene ontologies (GOs) and genetic features. Results: Compared to the Berkshire and Yorkshire pigs, the JNP had lower genetic diversity in terms of linkage disequilibrium decays. We summarized the selection signatures of the JNP as GO. In the JNP and Berkshire pigs, the most enriched GO terms were epithelium development and neuron-related. Considering the JNP and Yorkshire pigs, cellular response to oxygen-containing compound and generation of neurons were the most enriched GO. Conclusion: The selection signatures of the JNP were identified through the population differentiation statistic. The genes with possible selection signatures are expected to play a role in JNP's unique pork quality.

A Hybrid Method for Improvement of Evolutionary Computation (진화 연산의 성능 개선을 위한 하이브리드 방법)

  • Chung, Jin-Ki;Oh, Se-Young
    • Journal of the Korean Institute of Intelligent Systems
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    • v.12 no.4
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    • pp.317-322
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    • 2002
  • The major operations of Evolutionary Computation include crossover, mutation, competition and selection. Although selection does not create new individuals like crossover or mutation, a poor selection mechanism may lead to problems such as taking a long time to reach an optimal solution or even not finding it at all. In view of this, this paper proposes a hybrid Evolutionary Programming (EP) algorithm that exhibits a strong capability to move toward the global optimum even when stuck at a local minimum using a synergistic combination of the following three basic ideas. First, a "local selection" technique is used in conjunction with the normal tournament selection to help escape from a local minimum. Second, the mutation step has been improved with respect to the Fast Evolutionary Programming technique previously developed in our research group. Finally, the crossover and mutation operations of the Genetic Algorithm have been added as a parallel independent branch of the search operation of an EP to enhance search diversity.

Design of a simple closed-loop Transmit Diversity Scheme Using Sub-carrier Grouping for ECMA-392 Systems (ECMA-392 시스템을 위한 부 반송파 그룹핑 기반 폐루프 전송 다이버시티 기법 설계)

  • Joo, Jung Suk
    • Journal of the Institute of Electronics and Information Engineers
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    • v.51 no.4
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    • pp.3-9
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    • 2014
  • ECMA-392 is the first cognitive radio (CR) specification for personal/portable devices in TV white space. It supports two transmit antennas, for which only open-loop transmit diversity schemes are included. In this paper, we design a simple closed-loop transmit diversity scheme using sub-carrier grouping for ECMA-392 systems. First, sub-carrier grouping types suitable for ECMA-392 systems are described, and then a transmit antenna selection scheme is proposed. In order to reduce feedback information, decision on the transmit antenna selection in the given channel environments is made at the receiver side and the only index of the decided transmit antenna is sent to the transmit side. Through performance comparison to open-loop transmit diversity schemes of ECMA-392, it will be shown that with only a slight feedback overhead, the proposed scheme can improve receiver performance of ECMA-392 systems.

Disentangling Evolutionary Pattern and Haplotype Distribution of Starch Synthase III-1 (SSIIIb) in Korean Rice Collection

  • Bhagwat Nawade ;Yong-Jin Park
    • Proceedings of the Korean Society of Crop Science Conference
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    • 2022.10a
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    • pp.214-214
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    • 2022
  • Soluble starch synthases (SSs) elongate α-glucans from ADP-Glc to the glucan nonreducing ends and play a critical role in synthesizing resistant starch in the rice. A total of 10 SSs isoforms were reported in rice, including granules-bound starch synthase I (GBSSI), GBSSII, starch synthase I (SSI), SSIIa (SSII-3), SSIIb (SSII-2), SSIIc (SSII-1), SSIIIa (SSIII-2), SSIIIb (SSIII-1), SSIVa (SSIV-1), and SSIVb (SSIV-2). SSIII proteins are involved in forming the B chain and elongating cluster filling chains in amylopectin metabolism. The functions of SSIIIb (SSIII-1) are less clear as compared to SSs. Here, we sought to shed light on the genetic diversity profiling of the SSIII-1 gene in 374 rice accessions composed of 54 wild-type accessions and 320 bred cultivars (temperate japonica, indica, tropical japonica, aus, aromatic, and admixture). In total, 17 haplotypes were identified in the SSIII-1 coding region of 320 bred cultivars, while 44 haplotypes were detected from 54 wild-type accessions. The genetic diversity indices revealed the most negative Tajima's D value in the temperate-japonica, followed by the wild type, while Tajima's D values in other ecotypes were positive, indicating balancing selection. Nucleotide diversity in the SSIII-1 region was highest in the wild group (0.0047) while lowest in temperate-japonica. Lower nucleotide diversity in the temperate-japonica is evidenced by the negative Tajima's D and suggested purifying selection. The fixation index (FST) revealed a very high level of gene flow (low FST) between the tropical-japonica and admixture groups (FST=-0.21) followed by admixture and wild groups (-0.04), indica and admixture groups (0.02), while low gene flow with higher FST estimates between the temperate-japonica and aus groups (0.72), tropical-japonica and aromatic groups (0.71), and temperate-japonica and admixture groups (0.52). Taken together, our study offers insights into haplotype diversity and evolutionary fingerprints of SSIII-1. It provides genomic information to increase the resistant starch content of cooked rice.

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Genetic structure of apical membrane antigen-1 in Plasmodium falciparum isolates from Pakistan

  • Komal Zaib;Asifullah Khan;Muhammad Umair Khan;Ibrar Ullah;Tuan Cuong Vo;Jung-Mi Kang;Huong Giang Le;Byoung-Kuk Na;Sahib Gul Afridi
    • Parasites, Hosts and Diseases
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    • v.62 no.3
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    • pp.302-312
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    • 2024
  • Plasmodium falciparum apical membrane antigen-1 (PfAMA-1) is a major candidate for the blood-stage malaria vaccine. Genetic polymorphisms of global pfama-1suggest that the genetic diversity of the gene can disturb effective vaccine development targeting this antigen. This study was conducted to explore the genetic diversity and gene structure of pfama-1 among P. falciparum isolates collected in the Khyber Pakhtunkhwa (KP) province of Pakistan. A total of 19 full-length pfama-1 sequences were obtained from KP-Pakistan P. falciparum isolates, and genetic polymorphism and natural selection were investigated. KP-Pakistan pfama-1 exhibited genetic diversity, wherein 58 amino acid changes were identified, most of which were located in ectodomains, and domains I, II, and III. The amino acid changes commonly found in the ectodomain of global pfama-1 were also detected in KP-Pakistan pfama-1. Interestingly, 13 novel amino acid changes not reported in the global population were identified in KP-Pakistan pfama-1. KP-Pakistan pfama-1 shared similar levels of genetic diversity with global pfama-1. Evidence of natural selection and recombination events were also detected in KP-Pakistan pfama-1.