• Title/Summary/Keyword: Response Curve

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The Optimal Tumor Mutational Burden Cutoff Value as a Novel Marker for Predicting the Efficacy of Programmed Cell Death-1 Checkpoint Inhibitors in Advanced Gastric Cancer

  • Jae Yeon Jang;Youngkyung Jeon ;Sun Young Jeong ;Sung Hee Lim ;Won Ki Kang;Jeeyun Lee ;Seung Tae Kim
    • Journal of Gastric Cancer
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    • v.23 no.3
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    • pp.476-486
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    • 2023
  • Purpose: The optimal tumor mutational burden (TMB) value for predicting treatment response to programmed cell death-1 (PD-1) checkpoint inhibitors in advanced gastric cancer (AGC) remains unclear. We aimed to investigate the optimal TMB cutoff value that could predict the efficacy of PD-1 checkpoint inhibitors in AGC. Materials and Methods: Patients with AGC who received pembrolizumab or nivolumab between October 1, 2020, and July 27, 2021, at Samsung Medical Center in Korea were retrospectively analyzed. The TMB levels were measured using a next-generation sequencing assay. Based on receiver operating characteristic curve analysis, the TMB cutoff value was determined. Results: A total 53 patients were analyzed. The TMB cutoff value for predicting the overall response rate (ORR) to PD-1 checkpoint inhibitors was defined as 13.31 mutations per megabase (mt/Mb) with 56% sensitivity and 95% specificity. Based on this definition, 7 (13.2%) patients were TMB-high (TMB-H). The ORR differed between the TMB-low (TMB-L) and TMB-H (8.7% vs. 71.4%, P=0.001). The progression-free survival and overall survival (OS) for 53 patients were 1.93 (95% confidence interval [CI], 1.600-2.268) and 4.26 months (95% CI, 2.992-5.532). The median OS was longer in the TMB-H (20.8 months; 95% CI, 2.292-39.281) than in the TMB-L (3.31 months; 95% CI, 1.604-5.019; P=0.049). Conclusions: The TMB cutoff value for predicting treatment response in AGC patients who received PD-1 checkpoint inhibitor monotherapy as salvage treatment was 13.31 mt/Mb. When applying the programmed death ligand-1 status to TMB-H, patients who would benefit from PD-1 checkpoint inhibitors can be selected.

Pathogenicity of Two Species of Sclerotium to Nine Cultivars of Garlic Cultivated Widely in Korea (마늘의 흑색썩음균핵병에 대한 품종저항성의 역학적 평가)

  • Kim, Yong-Ki;Kwon, Mi-Kyung;Cho, Weon-Dae;Kim, Tack-Soo;Shim, Hong-Sik;Lee, Yong-Hwon;Lee, Chan-Jung;Lee, Seong-Chan
    • Research in Plant Disease
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    • v.10 no.2
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    • pp.105-111
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    • 2004
  • Mycelial growth and days required for sclerotial formation(DRSF) in vitro, and disease incidence of infected plants in the field were investigated to evaluate disease resistance of nine garlic cultivars against two species of Sclerotium causing garlic white rot. There were differences among mycelial growth and sclerotial formation of two white rot pathogens on different garlic cultivars in vitro. Mycelial growth showed the highest level on the clove of 'Daeseo'. Sclerotia of two white rot pathogen were formed the earliest on the clove of 'Kodang' and the latest on the clove of 'Namdo'. In field trial all of nine garlic cultivars were highly susceptible to Sclerotium cepivorum and cold-type garlics were less susceptible than warm-type garlics. Meanwhile garlic cultivars used showed differences among resistant responses to Sclerotium sp., forming large sclerotia. All of warm-type garlics showed highly susceptible response, but three cold-type garlics, 'Seosan', 'Danyang' and 'Yechon' showed moderate resistant response and 'Euisung' showed resistant response. To evaluate cultivar resistance of garlics quantitatively disease progress curve was transformed as linear regression equation. Among the intercept (early disease incidence) and the slope (disease infection rate) obtained from the transformed equation, final disease incidence, and area under disease progress curve(AUDPC), AUDPC was the most effective to evaluate disease resistance of garlics to both of white rot pathogens. There was little correlation between mycelial growth and sclerotial formation on garlic cloves in vitro, and epidemiological parameters (early disease incidence, final disease incidence, disease infection rate, AUDPC) obtained from the field trial. Mycelial growth of S. cepivorum was positively correlated with final disease incidence and disease infection rate obtained from the field trial, meanwhile DRSF was negatively correlated with the epidemiological parameters.

Understanding the Response Characteristics of X-ray Verification Film (X-선 Verification 필름의 반응 특성에 관한 연구)

  • Yeo Inhwan;Seong Jinsil;Chu Sung Sil;Kim Gwi Eon;Suh Chang Ok;Burch Sandra E.;Wang Chris K.
    • Radiation Oncology Journal
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    • v.16 no.4
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    • pp.505-515
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    • 1998
  • Purpose : This study is intended to understand the sensitometric characteristics and the emulsion properties of the commercially available CEA TVS film in comparison with the Kodak X-Omat V film. Materials and Methods : For this purpose, we have formulated an analytic expression of the characteristic curves for x-ray film exposed to mixed radiation of electrons, photons, and visible light. This mathematical expression was developed based on reaction-rate and target-hit theories. Unlike previous expressions. it relates optical density to emulsion properties such as grain size and silver bromide content We have also developed a quantity which characterizes the film response to visible light relative to that to photons and electrons. This quantity could be expressed as a function of grain area. Thus, we have developed mathematical expressions and quantities with which the emulsion properties of the films can be revealed based on the sensitometric characteristics. Demonstrating the use of this analytical study, we exposed CEA and Kodak verification films to the mixed radiation of electrons, photons, and visible light, and interpreted the experimental results accordingly. Results : We have demonstrated that: (1) the saturation density increases as the silver bromide content increases, (2) the time required to reach the threshold dose (to which the film begins to respond) when films are exposed to visible light decreases as the grain size increases, and (3) the CEA film contains more silver bromide. whereas the Kodak film contains larger grains. These findings were supported by the data provided by the manufacturers afterward. Conclusion : This study presented an analytical and experimental basis for understanding the response of X-ray film with respect to the emulsion properties.

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Biological Control of Polyphagotarsonenmus latus(Acari: Tasonemidae) by Amblyseius cucumeris(Acari: Phytoseiidae) (오이이리응애(Amblyseius cucumeris)를 이용한 차먼지응애(Polyphagotarsonemus latus) 생물적 방제)

  • La, Seung-Yong;Paik, Chae-Hoon;Lee, Geon-Hwi;Kim, Doo-Ho
    • Korean journal of applied entomology
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    • v.48 no.3
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    • pp.347-354
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    • 2009
  • This study was conducted on the biological control effects of the natural enemy, Amblyseius cucumeris, against Polyphagotarsonemus latus. The broad mite moved to a new habitat after the carrying capacity of the preferred habitat on the upper leaf has been reached. Population dynamics between predator, Amblyseius cucumeris, and prey, P. latus, were quite well synchronized since the predator followed the movement of the prey. In predation test by Amblyseius cucumeris on P. latus, A. cucumeris fed on 8.8, 15.2, 27.0 and 30.3 individuals/day under the temperatures of 15, 20, 25, and $30^{\circ}C$, respectively. The A. cucumeris larva, protonymph, deutonymph, adult male, and adult female fed on 0.5, 1.6, 5.2, 3.8, and 27 individuals of adult P. latus per day, respectively, under $25^{\circ}C$ condition. The functional response curve of adult P. latus to the densities of A. cucumeris showed Holling's Type II curve. The consumption of prey by A. cucumeris increased with the prey density increase, but the consumption rate decreased. The critical ratio of predator vs. prey effectively to suppress (98% over) the population of P. latus by releasing A. cucumeris was 1:40 on red pepper.

Photosynthetic Characteristics of Korean Endemic Plant, Aster koraiensis Nakai According to Growth and Development Conditions (생육환경에 따른 한국특산식물 벌개미취의 광합성 특성)

  • Nam, Hyo-Hoon;Son, Chang-Ki;Lee, Joong-Hwan;Kwon, Jung-Bae
    • Korean Journal of Plant Resources
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    • v.29 no.4
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    • pp.393-399
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    • 2016
  • This study was conducted to elucidate the photosynthetic response to the environment and establish optimum cultivation conditions for the Korean endemic plant, Aster koraiensis. Photosynthetic characteristics according to growth stage, light, CO2, and soil water potential were investigated. During the first year of transplanting, photosynthetic rates were drastically increased until June, after which they slowly declined, During the second year, photosynthetic rates declined throughout the entire growth period. The highest level of light compensation point was shown the early growth stage. Photosynthetic rates affected by intercellular CO2 concentration were maintained or decreased over the CO2 saturation point. The lowest CO2 compensation point was 16.1 μmol·mol−1 during March. The morphological changes of leaves were observed due to shading with chlorophyll contents increasing. Photosynthetic rates were higher at 0% and 50% shading treatments than at 75%. There were rarely any morphological changes of leaves due to soil moisture, however, changes to leaf compactness were observed. Photosynthetic rate, apparent quantum yield, and respiration rate increased, whereas water use efficiency decreased over −25 kPa of soil moisture.

Characterization of the a-Se Film for Phosphor based X-ray light Modulator (형광체 기반 X선 광 변조기를 위한 비정질 셀레늄 필름 특성)

  • Kang, Sang-Sik;Park, Ji-Koon;Cho, Sung-Ho;Cha, Byung-Youl;Shin, Jung-Wook;Lee, Kun-Hwan;Mun, Chi-Woong;Nam, Sang-Hee
    • Journal of Biomedical Engineering Research
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    • v.28 no.2
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    • pp.306-309
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    • 2007
  • PXLM(Phosphor based x-ray light modulator) has a combined structure by phosphor, photoconductor, and liquid crystal and it can realize x-ray image of high resolution in clinical diagnosis area. In this study, we fabricated a photoconductor and investigated electrical and optical properties to confirm application possibility of radiator detector of PXLM structure. As photoconductor, amorphous selenium(a-Se), which is used most in DR(Digital radiography) of direct conversion method, was used and for formation of thin film, it was formed as $20{\mu}m-thick$ by using thermal vacuum evaporation system. For a produced a-Se film, through XRD(X-ray diffraction) and SEM(Scanning electron microscope), we investigated that amorphous structure was uniformly established and through optical measurement, for visible light of 40 $0\sim630nm$, it had absorption efficiency of 95 % and more. After fabricated a-Se film on the top of ITP substrate, hybrid structure was manufactured through forming $Gd_2O_3:Eu$ phosphor of $270{\mu}m-thick$ on the bottom of the substrate. As the result to confirm electrical property of the manufactured hybrid structure, in the case of appling $10V/{\mu}m$, leakage current of $2.5nA/cm^2$ and x-ray sensitivity of $7.31nC/cm^2/mR$ were investigated. Finally, we manufactured PXLM structure combined with hybrid structure and liquid crystal cell of TN(Twisted nematic) mode and then, investigated T-V(Transmission vs. voltage) curve of external light source for induced x-ray energy. PXLM structure showed a similar optical response with T-V curve that common TN mode liquid crystal cell showed according to electric field increase and in appling $50\sim100V$, it showed linear transmission efficiency of $12\sim18%$. This result suggested an application possibility of PXLM structure as radiation detector.

Determination of Eu(III) by Fluorescence Spectrometry using Fiber Optic Sensor (광섬유센서를 이용한 Eu(III)의 형광분광법적 정량)

  • Lee, Sang Hak;Lee, Yoon Hee;Yang, Seung Tae;Choi, Sang Seob
    • Analytical Science and Technology
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    • v.11 no.5
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    • pp.409-412
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    • 1998
  • The analytical method to determine europium(III) ion in aqueous solution by fluorescence spectroscopy based upon the conformational change of calmodulin in the presence of the analyte has been studied. The fiber optic chemical sensor used in this study was constructed by entrapping a fluorescein-labeled calmodulin solution, EGTA, buffer solution at the common end of a bifurcated fiber optic bundle by means of a dialysis membrane. The calibration curve to determine europium(III) ion was obtained when concentration of calmodulin, concentration of EGTA, Tris-HCl buffer solution, pH, excitation wavelength and fluorescence wavelength were $5.0{\times}10^{-5}M$, 0.50 mM, 5.0 mM, 7.0, 495 nm and 520 nm, respectively. The detection limit was $1.0{\times}10^{-11}M$ and the working range of the calibration curve for the sensor was $1.0{\times}10^{-11}M{\sim}1.0{\times}10^{-9}M$. The response time was 15 minutes. For the determination of europium(III) ion by the present method, $Na^+$ and $K^+$ ions did not interfere but $Ca^{2+}$ ion seriously interfered.

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A Study on the Evaluation of 3D Dose Distribution using Normoxic Polymer Gel (정상산소 중합체 겔 선량계를 이용한 3차원 방사선량 평가에 관한 연구)

  • Chung, Se-Young;Kim, Young-Bum;Kwon, Young-Ho;Lee, Suk
    • The Journal of Korean Society for Radiation Therapy
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    • v.19 no.1
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    • pp.7-17
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    • 2007
  • Purpose: As increasing complexity of modern radiotherapy technique, more developing dosimetry is required. Polymer gel dosimeters offer a wide range of potential applications with high resolution and assured quality in the thee-dimensional verification of complex dose distribution such as intensity-modulated radiotherapy (IMRT). The purpose of this study is to find the most sensitive and suitable gel as a dosimeter by varying its composition ratio and its condition such as temperature during manufacturing. Materials and Methods: Each polymer gel with various ratio of composition was irradiated with the same amount of photon beam accordingly. Various polymer gels were analyzed and compared using a dedicated software written in visual C++ which converts TE images to R2 map images. Their sensitivities to the photon beam depending on their composition ratio were investigated. Results: There is no dependence on beam energy nor dose rate, and calibration curve is linear. Conclusion: The polymer gel dosimeter developed by using anti-oxidant in this study proved to be suitable for dosimetry.

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Coconut-derived D-xylose affects postprandial glucose and insulin responses in healthy individuals

  • Yun, Jung-Bae;Bak, Youn-Kyung;Kim, Bum-Sik;Kim, Min-Sun;Lee, Jin-Hee;Sung, Mi-Kyung
    • Nutrition Research and Practice
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    • v.5 no.6
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    • pp.533-539
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    • 2011
  • Metabolic alterations including postprandial hyperglycemia have been implicated in the development of obesity-related diseases. Xylose is a sucrase inhibitor suggested to suppress the postprandial glucose surge. The objectives of this study were to assess the inhibitory effects of two different concentrations of xylose on postprandial glucose and insulin responses and to evaluate its efficacy in the presence of other macronutrients. Randomized double-blind cross-over studies were conducted to examine the effect of D-xylose on postprandial glucose and insulin response following the oral glucose tolerance test (OGTT). In study 1, the overnight-fasted study subjects (n = 49) consumed a test sucrose solution (50 g sucrose in 130 ml water) containing 0, 5, or 7.5 g D-xylose powder. In study 2, the overnight-fasted study subjects (n = 50) consumed a test meal (50 g sucrose in a 60 g muffin and 200 ml sucrose-containing solution). The control meal provided 64.5 g of carbohydrates, 4.5 g of fat, and 10 g of protein. The xylose meal was identical to the control meal except 5 g of xylose was added to the muffin mix. In study 1, the 5 g xylose-containing solutions exhibited significantly lower area under the glucose curve (AUCg) and area under the insulin curve (AUCi) values for 0-15 min (P < 0.0001, P < 0.0001), 0-30 min (P < 0.0001, P < 0.0001), 0-45 min (P < 0.0001, P < 0.0001), 0-60 min (P < 0.0001, P < 0.0001), 0-90 min (P < 0.0001, P < 0.0001) and 0-120 min (P = 0.0071, P = 0.0016). In study 2, the test meal exhibited significantly lower AUCg and AUCi values for 0-15 min (P < 0.0001, P < 0.0001), 0-30 min (P < 0.0001, P < 0.0001), 0-45 min (P < 0.0001, P = 0.0005), 0-60 min (P = 0.0002, P = 0.0025), and 0-90 min (P = 0.0396, P = 0.0246). In conclusion, xylose showed an acute suppressive effect on the postprandial glucose and insulin surges.

Effects of Shading Treatment on Photosynthetic Activity of Acanthopanax senticosus (차광처리가 가시오갈피의 광합성 활성에 미치는 영향)

  • Kim, Pan-Gi;Lee, Kab-Yeon;Hur, Seong-Doo;Kim, Sun-Hee;Lee, Eun-Ju
    • The Korean Journal of Ecology
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    • v.26 no.6
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    • pp.321-326
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    • 2003
  • This study was conducted to investigate and effects of shading treatment on photosynthetic activity of Acanthopanax senticosus. We investigated plant growth, light response curve and A-Ci curve to photosynthesis of A. senticosus at 55%, 75%, and 90% shading treatment. As results, the ratio of above-ground/under-ground biomass was increased at 75% shaded condition and showed highest dry biomass. Under shaded conditions, plants had lower chlorophyll a+b content and a/b ratio and also showed thinner leave. But shaded plants showed higher leaf area and higher total leaf area per a plant. This apparently indicates adapted responses to shaded treatment. Effects of shading treatments on photosynthetic activity were higher in apparent quantum yield, carboxylation efficiency, re-phosphrylation but lower in light compensation point. These results suggested that higher photosynthesis rates in shaded treatments were due to activated carboxylation efficiency. Shading treatment had lower water use efficiency thatn controls but still higher than other tree species.