• Title/Summary/Keyword: Progeny test

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Estimation of the Accuracy of Genomic Breeding Value in Hanwoo (Korean Cattle) (한우의 유전체 육종가의 정확도 추정)

  • Lee, Seung Soo;Lee, Seung Hwan;Choi, Tae Jeong;Choy, Yun Ho;Cho, Kwang Hyun;Choi, You Lim;Cho, Yong Min;Kim, Nae Soo;Lee, Jung Jae
    • Journal of Animal Science and Technology
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    • v.55 no.1
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    • pp.13-18
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    • 2013
  • This study was conducted to estimate the Genomic Estimated Breeding Value (GEBV) using Genomic Best Linear Unbiased Prediction (GBLUP) method in Hanwoo (Korean native cattle) population. The result is expected to adapt genomic selection onto the national Hanwoo evaluation system. Carcass weight (CW), eye muscle area (EMA), backfat thickness (BT), and marbling score (MS) were investigated in 552 Hanwoo progeny-tested steers at Livestock Improvement Main Center. Animals were genotyped with Illumina BovineHD BeadChip (777K SNPs). For statistical analysis, Genetic Relationship Matrix (GRM) was formulated on the basis of genotypes and the accuracy of GEBV was estimated with 10-fold Cross-validation method. The accuracies estimated with cross-validation method were between 0.915~0.957. In 534 progeny-tested steers, the maximum difference of GEBV accuracy compared to conventional EBV for CW, EMA, BT, and MS traits were 9.56%, 5.78%, 5.78%, and 4.18% respectively. In 3,674 pedigree traced bulls, maximum increased difference of GEBV for CW, EMA, BT, and MS traits were increased as 13.54%, 6.50%, 6.50%, and 4.31% respectively. This showed that the implementation of genomic pre-selection for candidate calves to test on meat production traits could improve the genetic gain by increasing accuracy and reducing generation interval in Hanwoo genetic evaluation system to select proven bulls.

Research on the Reformation of the Selection Index for Hanwoo Proven Bull (한우보증씨수소 선발지수 개선에 관한 연구)

  • Kim, Hyo-Sun;Hwang, Jeong-Mi;Choi, Tae-Jeong;Park, Byong-Ho;Cho, Kwang-Hyun;Park, Cheol-Jin;Kim, Si-Dong
    • Journal of Animal Science and Technology
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    • v.52 no.2
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    • pp.83-90
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    • 2010
  • Hanwoo proven bulls have been selected since 1987 and consequently contributed to farmers for the improvement of beef cattle in Korea. The demand for the quality beef production as well as higher production efficiency was erupted after early 2000 as relatively cheap imported beef released. Therefore the pressure on the reformation of selection index for Hanwoo proven bulls have been piled up to furnish with Hanwoo's competitive. A total of 734 progeny test data were analyzed to select traits and their weights in the selection index to meet the beef market requirement. Regression analysis with stepwise selection method was used to select proper trait and its weight for selection index. A series of computer simulation was carried out to compare the currently using selection index with the alternate two selection indices proposed in this study. New selection index using standardized breeding values of Loin eye Muscle Area (LMA), Backfat Thickness (BFT) and Marbling Score (MS) with weight ratio 1:-1:6 was proposed. Results showed higher performance in improving MS and BFT gain by 22% and 31% still holding 86%~89% of genetic gain achieved by current index in Carcass Weight (CW) and LMA when new selection index was fitted. Because, new index has little consideration for production cost, further research should be performed to build selection index including cost and income simultaneously.

A Comparison in Growth and Water Use Efficiency between Superior and Inferior Families from Open-Pollinated Progenies of Pinus densiflora under Different Environmental Conditions (소나무 풍매차대 검정림에서의 생장 우수가계와 불량가계간 입지환경에 따른 생장과 수분이용효율 비교)

  • Oh, Chang-Young;Han, Sang-Urk;Cheon, Byung-Whan;Oh, Chan-Jin
    • Korean Journal of Agricultural and Forest Meteorology
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    • v.15 no.2
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    • pp.102-108
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    • 2013
  • To understand the relationship of growth and water use efficiency (WUE) between superior and inferior families from open-pollinated progenies of P. densiflora, two families (one superior and one inferior families) in two open-pollinated progeny test sites were selected using volume growth at 26 years. And we compared environmental factors and WUE which was calculated from measured ${\delta}^{13}C$ in the wood. The ${\delta}^{13}C$ change during the last 20 years showed steady decrease and same pattern as WUE in the fertile site, while there was an inverse relationship between ${\delta}^{13}C$ and WUE in poor site, indicating an interaction between gene and environment. The superior family showed higher WUE than inferior family in poor site, indicating efficient stomatal control of the former under water stress. Water use efficiency calculated by carbon isotope composition can be used as a selection criterion for drought tolerance families in open-pollinated progenies of P. densiflora.

Cloning of Farm Animals in Japan; The Present and the Future

  • Shioya, Yasuo
    • Proceedings of the Korean Society of Developmental Biology Conference
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    • 2001.10a
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    • pp.37-43
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    • 2001
  • 1. About fifty thousand of cattle embryos were transferred and 16000 ET-calves were born in 1999. Eighty percents of embryos were collected from Japanese Black beef donors and transferred to dairy Holstein heifers and cows. Since 1985, we have achieved in bovine in vitro fertilization using immature oocytes collected from ovaries of slaughterhouse. Now over 8000 embryos fertilized by Japanese Black bull, as Kitaguni 7~8 or Mitsufuku, famousbulls as high marbling score of progeny tests were sold to dairy farmers and transferred to their dairy cattle every year. 2. Embryo splitting for identical twins is demonstrated an useful tool to supply a bull for semen collection and a steer for beef performance test. According to the data of Dr. Hashiyada(2001), 296 pairs of split-half embryos were transferred to recipients and 98 gave births of 112 calves (23 pairs of identical twins and 66 singletons). 3. A blastomere-nuclear-transferred cloned calf was born in 1990 by a joint research with Drs. Tsunoda, National Institute of Animal Industry (NIAI) and Ushijima, Chiba Prefectural Farm Animal Center. The fruits of this technology were applied to the production of a calf from a cell of long-term-cultured inner cell mass (1988, Itoh et al, ZEN-NOH Central Research Institute for Feed and Livestock) and a cloned calf from three-successive-cloning (1997, Tsunoda et al.). According to the survey of MAFF of Japan, over 500 calves were born until this year and a glaf of them were already brought to the market for beef. 4. After the report of "Dolly", in February 1997, the first somatic cell clone female calves were born in July 1998 as the fruits of the joint research organized by Dr. Tsunoda in Kinki University (Kato et al, 2000). The male calves were born in August and September 1998 by the collaboration with NIAI and Kagoshima Prefecture. Then 244 calves, four pigs and a kid of goat were now born in 36 institutes of Japan. 5. Somatic cell cloning in farm animal production will bring us as effective reproductive method of elite-dairy- cows, super-cows and excellent bulls. The effect of making copy farm animal is also related to the reservation of genetic resources and re-creation of a male bull from a castrated steer of excellent marbling beef. Cloning of genetically modified animals is most promising to making pig organs transplant to people and providing protein drugs in milk of pig, goat and cattle. 6. Farm animal cloning is one of the most dreamful technologies of 21th century. It is necessary to develop this technology more efficient and stable as realistic technology of the farm animal production. We are making researches related to the best condition of donor cells for high productivity of cloning, genetic analysis of cloned animals, growth and performance abilities of clone cattle and pathological and genetical analysis of high rates of abortion and stillbirth of clone calves (about 30% of periparutum mortality). 7. It is requested in the report of Ministry of Health, labor and Welfare to make clear that carbon-copy cattle(somatic cell clone cattle) are safe and heathy for a commercial market since the somatic cell cloning is a completely new technology. Fattened beef steers (well-proved normal growth) and milking cows(shown a good fertility) are now provided for the assessment of food safety.

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Discovery of Candidate SNP Related to Meat Quality Using the BcSNPdb and Cattle QTLdb in Hanwoo (한우에서 Cattle QTLdb와 BcSNPdb를 이용한 육질연관 후보 SNP 발굴)

  • Kim, Dae-Hyun;Lee, Yoon-Seok;Oh, Young-Sook;Choi, Chang-Bon;Yeo, Jung-Sou
    • Journal of Animal Science and Technology
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    • v.50 no.6
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    • pp.775-782
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    • 2008
  • This study was aimed to find SNPs related with marbling score in Hanwoo(Korean cattle) using BcSNPdb. This study was searched QTL region related with marbling score and extracted 3,605 SNPs by applying BcSNPdb. Among these SNPs, 347 nonsynonymous SNP were selected and 160 SNPs were verified by PCR and finally proven with application to experimental data of the national progeny test. BTS_003888, BTS_012665 and BTS_009454 candidate SNPs were revealed significantly associated with marbling score(P<0.05), and BTS_025951 candidate SNPs was significantly associated with backfat thickness(P<0.05). From the result, SNPs from BTS_003888, BTS_009454, BTS_052584 and BTS_025951 were considered to be useful for the advancement in selective improved model in marbling score and backfat thickness of Hanwoo.

Variation of Material Properties of Korean Red Pine of Superior Families - Tracheid Length, Microfibril Angle, Resin Canal and Specific Gravity - (소나무 우량 가계별 기초재질 변이 - 가도관, 마이크로피브릴 경사각, 수지구 분포 및 전건비중을 중심으로 -)

  • Park, Beyung-Su;Park, Jung-Hwan;Han, Sang-Urk
    • Journal of Korea Foresty Energy
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    • v.25 no.2
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    • pp.9-15
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    • 2006
  • The quality of wood is largely depend on the characteristics of xylem tissue and their variation. They may include tracheid length, microfibril angle, distribution and amount of resin canal, as well as specific gravity as indicator of material properties. In this study, variation of these elements between and within 30 superior families of Pinus densifloa in progeny test forest were examined and the results are as follows; In terms of elongation ratio of tracheid length which is less than 1%, the sample tree showed a transition to matured wood after 13 years particularly in Kangwon 25, 30, 90, 56 and Chungnam 4 families. The average specific gravity were from 0.35 to 0.49, and differences between the families were significant. Number of transverse resin canal per unit area were also found to be significant between the families. The microfibril angles measured at 15th ring number ranged from 0.9 degree to 28.6 degree. More studies are necessary to tell whether these variation is inherited by genetic or individual characteristic. However it would be desirable that these elements be considered as key elements in the early stage of selection process of superior tree to ensure good quality of wood production in future.

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Application of DNA Test for Individual Traceability in Hanwoo (Korean Cattle) (한우의 개체 추적 검증을 위한 유전자 감식 기법 활용 연구)

  • 이학교;전광주;공홍식;오재돈;최일신;김종대;조창연;윤두학;신형두
    • Food Science of Animal Resources
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    • v.24 no.1
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    • pp.8-14
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    • 2004
  • Identification of animals has been made with an ear tag with dummy code, and blood typing has been used for paternity and individual identification in live animals. As various genetic markers are for different cattle breeds vary, the discrete genetic markers are necessary to identify Hanwoo. A total of 740 progeny testing Hanwoo were used to identify Hanwoo specific markers. To examine traceability of individuals by using breed specific genetic codes, four animal were randomly sampled, and traced from live animals to post-slaughter processing stages. The candidate genetic makers used in the study were 16 DNA microsatellites which were identified in romosomes 1 and 14. The number of alleles of those DNA microsatellites ranged from a minimum of 3 to maximum of 12. The heterozygote frequency ranged from 0.022 to 0.824. Effective number of alleles for each DNA microsatellites were 3 to 6. Six selected candidate genetic markers were able ti trace individual cattle with an 100% confidence level.

Postpartum Reproductive Management Based on the Routine Farm Records of a Dairy Herd: Relationship between the Metabolic Parameters and Postpartum Ovarian Activity

  • Takagi, Mitsuhiro;Hirai, Toshiya;Moriyama, Naoki;Ohtani, Masayuki;Miyamoto, Akio;Wijayagunawardane, Missaka P.B.
    • Asian-Australasian Journal of Animal Sciences
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    • v.18 no.6
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    • pp.787-794
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    • 2005
  • The aim of this study was 1) to confirm the practical efficiency of a routine milk P4 monitoring system for postpartum reproductive management of a dairy herd, and 2) to evaluate the relationship between the blood metabolic profiles, milk quality and body weight of individual cows in the farm records, which may reflect the postpartum nutritional condition, and the time of postpartum resumption of ovarian activity of dairy cows. A total of 116 Holstein cows was used in the present study. First, during the period of Experiment 1, postpartum reproductive management based on weekly measured milk P4 concentration from individual cows was conducted. Compared with the reproductive records of the past two years without P4 monitoring, although the day from calving to first AI did not change, both the number of AI until pregnant (with P4; 1.9 times vs. without P4; 2.9 times) and the days open (with P4; 95.1 days vs. without P4; 135.8 days and 133.8 days) were significantly decreased. In Experiment 2, the measurement of blood constituents such as albumin, blood urea nitrogen, packed cell volume, ammonia, glucose, total cholesterol, non-esterified, AST and $\gamma$-GTP was performed on the blood samples taken once approximately 14 days postpartum, to monitor both health and nutritional conditions. The milk constituent parameters, such as milk protein (MP), milk fat (MF), SNF and lactose, collected from the monthly progeny test of individual cows, were used to monitor the postpartum nutritional status. Furthermore, the data obtained from the routine measurements of body weight were used to calculate the rate of peripartum body weight loss. The resumption day of the postpartum estrous cycle was assumed from the milk P4 profiles of individual cows. There was no clear relationship between each parameter from blood examination and those from resumption time. However, the cows had low values of MP, and SNF, which significantly affected the resumption of the postpartum estrous cycle. Similarly, a higher rate of body weight loss indicated a significant delay (more than 1 month) in the resumption of the postpartum estrous cycle, compared with the groups that had a medium or lower rate of body weight loss. The results of the present study demonstrated that the implementation of routine milk P4 monitoring-based postpartum reproductive management, together with milk quality parameters and routine BW data available in field conditions may be utilized as a practical approach for increasing the postpartum reproductive efficiency of a high yielding dairy herd.

Breeding of a Multi-flowering and Early-flowering White Calla Lily Cultivar 'White Cutie' Resistant to Soft Rot Disease (절화수량이 우수한 무름병 저항성 조생 백색칼라 'White Cutie' 육성)

  • Joung, Hyang Young;Cho, Hae Ryong;Rhee, Ju Hee;Shin, Hak Ki;Park, Sang Kun
    • Horticultural Science & Technology
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    • v.33 no.4
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    • pp.618-623
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    • 2015
  • The new white calla lily (Zantedeschia aethiopica) cultivar 'White Cutie' was bred at the National Institute of Horticultural & Herbal Science (NIHHS) in 2011. 'Childsiana' showing the multi-flowering characteristic and 'Wedding March' resistant to soft rot disease were artificially crossed in 2004. Of the progeny, 'White Cutie' was selected specifically for use in cut flower production after investigation over seven years (2005 to 2011) of genetic and phenotypic characteristics, resistance against soft rot, and customer preference regarding the culture vigor and post-harvest quality. 'White Cutie' was early flowering (85.6 days to flowering) with white flowers (RHS W155C), although it had a mid-sized flower in which spathe height and width were 8.6 cm and 8.7 cm, respectively. It was multi-flowering (6.2 flowers per plant) and produced a very high number of cormels (13.4 per plant). Furthermore, it was resistant to soft rot disease.

Production of Supermale(YY) and Superfemale(${\Delta}YY$) Nile Tilapia (Oreochromis niloticus) by Sex Reversal and Chromosome Manipulation II. Progeny Tests with Supermale and Superfemale Nile Tilapia (성전환 및 염색체 공학 기법을 이용한 초수컷(YY) 및 초암컷(${\Delta}YY$) 나일틸라피아(Oreochromis niloticus) 생산 II. 생산된 초수컷 및 초암컷 나일틸라피아의 자손검정)

  • Kim Dong Soo;Noh Choong Hwan;Choi Yoon-Hee;Nam Yoon Kwon
    • Journal of Aquaculture
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    • v.9 no.1
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    • pp.101-106
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    • 1996
  • Gynogenetic males induced from sex reversed female (${\Delta}XY$) were crossed with normal female (XX) for analysing their genotypes. The fish tested produced a high percentage of male progenies (93.3 to $100\%$) and were considered as supermales (YY). Superfemales (${\Delta}YY$) were also produced by combination of sex reversal and chromosome manipulation techniques. Superfemale fish can be produced approximetly $90\%$ of male when the fish were crossed with normal male. Chi-square values against an expected 1 : 1 (male : female) ratio were highly significant for both YY males${\times}$ normal females (P<0.01 or P<0.001) and ${\Delta}YY$ females${\times}$normal males (P<0.005 or P<0.001). All male progenies were produced consistently when crossed supermales (YY) with superfemales (${\Delta}YY$).

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