• 제목/요약/키워드: Physicochemical similarity

검색결과 33건 처리시간 0.026초

생물학적 자극 통제 수단으로서 활용하기 위한 돼지 페로몬성 냄새 물질의 탐색: I. 5$\alpha$-androst-16-en-3-one 유사체들의 리간드에 기초한 분자 유사성과 물리화학 파라미터 (The Search of fig Pheromonal Odorants for Biostimulation Control System Technologies: I. Ligand Based Molecular Shape Similarity of 5$\alpha$-androst-16-en-3-one Analogous and Their Physicochemical Parameters)

  • 성낙도;김철호;진동일;박창식
    • Reproductive and Developmental Biology
    • /
    • 제28권1호
    • /
    • pp.45-52
    • /
    • 2004
  • To search a new porcine pheromonal odorants, this research for biostimulation and role of pheromone was augmented by means of "control system technologies" to offer a potentially useful and practical way to improve reproductive efficiency in livestock species. Therefore the 13 physicochemical parameters such as similarity indice (S), hydrophobicity (logP) and van der Waals molecule volume (MV) etc. of 54 steroid analogues, which are analogous of substrate molecules, 5$\alpha$-androst-16-en-3-one (P1) and 5$\alpha$-androst-16-en-3-ol (P2) of lipocalin as receptor of pig pheromones were calculated and discussed. The physicochemical properties of these steroid analogues were mainly followed by steric dissimilar of A and D ring in steroid nucleus. And we found that from correlation with S values and MV constants of molecules, the more MV constants are small, the more S values tend to approach 1. Based on this results, the S-values of 4-androsten-3,17-dione (P1-1) and 5 $\alpha$ -androstan-3-one (P2-1) were 1.0, respectively. The two compounds of them were chosen because they showed the same value each other at a side of hydrophobicity, molar refractivity and molecular volume. It is expected that the new two compounds will be able to substitute for P1 and P2, porcine pheromonal odorants.

In silico characterisation, homology modelling and structure-based functional annotation of blunt snout bream (Megalobrama amblycephala) Hsp70 and Hsc70 proteins

  • Tran, Ngoc Tuan;Jakovlic, Ivan;Wang, Wei-Min
    • Journal of Animal Science and Technology
    • /
    • 제57권12호
    • /
    • pp.44.1-44.9
    • /
    • 2015
  • Background: Heat shock proteins play an important role in protection from stress stimuli and metabolic insults in almost all organisms. Methods: In this study, computational tools were used to deeply analyse the physicochemical characteristics and, using homology modelling, reliably predict the tertiary structure of the blunt snout bream (Ma-) Hsp70 and Hsc70 proteins. Derived three-dimensional models were then used to predict the function of the proteins. Results: Previously published predictions regarding the protein length, molecular weight, theoretical isoelectric point and total number of positive and negative residues were corroborated. Among the new findings are: the extinction coefficient (33725/33350 and 35090/34840 - Ma-Hsp70/ Ma-Hsc70, respectively), instability index (33.68/35.56 - both stable), aliphatic index (83.44/80.23 - both very stable), half-life estimates (both relatively stable), grand average of hydropathicity (-0.431/-0.473 - both hydrophilic) and amino acid composition (alanine-lysine-glycine/glycine-lysine-aspartic acid were the most abundant, no disulphide bonds, the N-terminal of both proteins was methionine). Homology modelling was performed by SWISS-MODEL program and the proposed model was evaluated as highly reliable based on PROCHECK's Ramachandran plot, ERRAT, PROVE, Verify 3D, ProQ and ProSA analyses. Conclusions: The research revealed a high structural similarity to Hsp70 and Hsc70 proteins from several taxonomically distant animal species, corroborating a remarkably high level of evolutionary conservation among the members of this protein family. Functional annotation based on structural similarity provides a reliable additional indirect evidence for a high level of functional conservation of these two genes/proteins in blunt snout bream, but it is not sensitive enough to functionally distinguish the two isoforms.

Comparative Molecular Similarity Indices Analysis (CoMSIA) of 8-substituted-2-aryl-5-alkylaminoquinolines as Corticotropin-releasing factor-1 Receptor Antagonists

  • Nagarajan, Santhosh Kumar;Madhavan, Thirumurthy
    • 통합자연과학논문집
    • /
    • 제9권4호
    • /
    • pp.241-248
    • /
    • 2016
  • Corticotropin-releasing factor receptors (CRFRs) activate the hypothalamic-pituitary-adrenal axis, which is an integral part of the fight or flight response to stress. Increase in CRH level is observed in Alzheimer's disease and major depression and hypoglycemia. Here, we report on the relevant physicochemical parameters required for the CRFR inhibitors. Comparative molecular similarity indices analysis (CoMSIA) was performed with the derivatives of 8-substituted-2-aryl-5-alkylaminoquinolinesas CRFR inhibitors. The best predictions were obtained for the best CoMSIA model with a $q^2$ of 0.576 with 6 components and $r^2$ of 0.977. The statistical parameters from the generated CoMSIA models indicated that the data are well fitted and have high predictive ability. CoMSIA contour maps could be useful in the designing of more potent and novel CRFR derivatives.

쌀의 저장기간에 따른 쌀가루와 생전분의 특성 (Effect of Aging on Physicochemical and Pasting Properties of Nonwaxy Rice Flour and its Starch)

  • 김완수
    • 한국생활과학회지
    • /
    • 제14권6호
    • /
    • pp.1037-1046
    • /
    • 2005
  • Using three consecutive years' harvested rices and their starches isolated from rice flours by alkaline method, it was found that no significant aging effect on rice flour and starch was observed based on following results. Proximate data of flours or starches showed in similarity, except high level of crude fat in rice flour and rice starch harvested in 2002. In SEM, the surface of aged rice flour had slightly layered shape due to possible abrasion during storage, and that of aged starch showed more smooth and less rigid polygonal shape. X-ray diffraction patterns of flours and starches were all A type, and crystallinity of rice starch harvested in 2000 had the smallest. From tristimulus colorimetry (Hunterlab Color), total color difference ($\Delta$E) calculated from L, a, and b gave less color difference with the darkest in 2002 harvested one among flours and the lightest in 2001 one among starches. WBCs of both 2002 rice flour and starch were the lowest among samples studied. At 80$^{\circ}C$, swelling power and solubility of rice starches harvested in 2000, 2001 and 2002 were 14.35, 9.75; 14.04, 9.6; and 12.49, 8.82, respectively. The highest peak viscosities measured by RVA were shown both in 2001 rice flour and in its starch. Starch and milled rice flour harvested in 2000 had higher hydrolytic $\alpha$-amylase, compared to other flour and starch samples.

  • PDF

두류 전분의 이화학적 특성비교 -동부, 녹두, 강낭콩, 팥- (Comparison of Physicochemical Propertres of Various Bean Starches -Cowpea, mung bean, kidney bear and red bean-)

  • 손경희;윤계순;정혜정;채선희
    • 한국식품조리과학회지
    • /
    • 제6권1호
    • /
    • pp.13-19
    • /
    • 1990
  • Cowpea, mung bean, Kidney bean and red bean are simular properties. In order to elucidate the similarity among these four starches, some physicochemical properties of starches were compared. Water binding capacity of kidney bean and red bean (199%) starches are higher than mung bean and cowpea. The solubility, swlling power and optical transmittance of the four starches showed a similar pattern, but kidney bean and red bean starches had a lower swelling power than cowpea starches. Cowpea, mung bean, kidney bean and red bean starches had the blue value of 0.41, 0.47, 0.42 and 0.50, the alkali content of 8.4, 8.0, 4.13, 4.13, the amylose content of amylose of 30,000, 29,268, 52, 173 and 33, 611 and glucose unit per segment of amylopectin of 27.6, 26.8, 18.35 and 12.9 respectively. The results of X-ray diffraction studies showed A pattern for four starches.

  • PDF

Evaluation of Rheological and Sensory Characteristics of Plant-Based Meat Analog with Comparison to Beef and Pork

  • Bakhsh, Allah;Lee, Se-Jin;Lee, Eun-Yeong;Hwang, Young-Hwa;Joo, Seon-Tea
    • 한국축산식품학회지
    • /
    • 제41권6호
    • /
    • pp.983-996
    • /
    • 2021
  • This study explored the physicochemical, textural, and sensorial properties of a meat analog (MA) as compared to beef and pork meats. Results illustrate that MA patties had lower moisture, fat, and protein content, as well as higher ash and crude fiber than beef and pork. Likewise, MA patties had a higher pH, lightness (L*), and redness (a*) than either beef or pork. Pork meat exhibited the highest released water (RW) and cooking loss (CL) values, followed closely by MA with beef displaying the lowest values. Regardless of patty type, the post-cooking diameter patties were reduced significantly (p<0.05). However, the Warner-Bratzler shear force (WBSF), hardness, chewiness, and gumminess of beef were significantly higher than that of either pork or MA. The visible appearance of MA patties had more porous and loose structures before and after cooking. Consequently, based on sensory parameters, MA patties demonstrated the higher values for appearance and firmness, followed by beef and pork respectively, although the difference was not statistically significant. Therefore, the current study demonstrated that some physicochemical, textural, and sensory characteristics of beef and pork exhibited the most similarity to MA.

Physicochemical characteristics and volatile profile of novel lemon varieties, Minimon and Jeramon

  • Heejin Kang;Sunmee Lee;Jaecheol Kim;Hyosun Park;Suna Kim
    • 한국식품저장유통학회지
    • /
    • 제30권5호
    • /
    • pp.770-784
    • /
    • 2023
  • Although most lemons are imported into Korea, their consumption is increasing. Development of domestic varieties of Jeramon and Minimon is currently underway in an effort to meet the increasing demand for fresh lemons. In this study, an analysis of the physicochemical characteristics of Jeramon and Minimon, including their flavor components and antioxidant properties, was conducted. The results revealed that these new varieties of Korean lemon can be regarded as good sources of antioxidants and phytochemicals. Compared to Sunkist, the most consumed lemon variety in Korea, Minimon contained more than twice as much β-cryptoxanthin, and the content of L-ascorbic acid was more than three-four-fold higher in both Minimon and Jeramon. In addition, results from measurement of DPPH and ABTS radical scavenging activities indicated that Jeramon extract exhibited the highest antioxidant activity. In the volatile profile analysis, the profiles of volatile components showed high similarity among the three lemon samples, and the composition ratio was largely dominated by terpenoids. A markedly higher ratio of d-limonene and thymol was detected in the Minimon variety compared with that in the other two varieties. Collectively, the findings from this study on Korean lemon varieties provide a basis as well as valuable guidance for breeding domestic lemon varieties.

해방풍의 성분연구 (Study on the Components of Glehniae Radix)

  • 서윤교;류경수
    • 생약학회지
    • /
    • 제7권4호
    • /
    • pp.233-235
    • /
    • 1976
  • Substances $I{\sim}VII$ are isolated from the root of Glehnia littoralis which has been often used as a subsitute of Bang-Poong in Korea. White needle crystalline substance of $C_{29}H_{50}O$, m.p. $137{\sim}139^{\circ}C$ was confirmed as ${\beta}-sitosterol$ through elemental analysis, derivative synthesis, IR and physicochemical tests. Moreover, it was concluded that white needle crystal of $C_{12}H_{8}O_{4}$, m.p. $188{\sim}189^{\circ}$ was confirmed as bergapten, through a contrast test with standard substance and by UV and IR-spectra. It was found that substance III and VII coincided with the Rf values of imperatorin and umbelliferone and to its colors under the UV-ray, and its similarity to UV-spectrum can be recognized, but their melting points are remarkedly different respectively.

  • PDF

두류, 곡류 및 감자전분의 호화 특성 (Gelatinization Properties of Legume, Cereal and Potato Starches)

  • 김향숙;안승요
    • 한국식품조리과학회지
    • /
    • 제10권1호
    • /
    • pp.80-85
    • /
    • 1994
  • 묵의 형성과 그의 물리적 특성을 구명하기 위하여 동부전분을 포함한 두류, 곡류 및 감자 전분의 이화학적 특성과 호화 특성을 조사하였다. 동부, 녹두, 도토리, 메밀 전분은 비슷한 수분함량과 아밀로오스 함량을 나타냈고, 팽화력, 용해도에서는 공통점이나 어떤 경향을 볼 수 없었다. DSC에 의한 호화 양상에서 동부, 도토리, 메밀 전분은 비슷한 패턴으로 두 개의 흡열 peak를 나타냈으며, 호화온도 범위가 다른 전분들에 비하여 넓었다. 호화된 전분 입자를 주사전자현미경(SEM)으로 관찰한 결과 묵을 형성하는 동부, 녹두, 도토리 및 메밀 전분은 온도가 증가함에 따라 입자의 형태가 없어지고 심하게 중첩이 일어났다.

  • PDF

전통민속소주의 물리화학적 특성 (Physicochemical Characteristics of Korean Folk Sojues)

  • 이동선;박혜성;김건;이택수;노봉수
    • 한국식품과학회지
    • /
    • 제26권5호
    • /
    • pp.649-654
    • /
    • 1994
  • 증류주의 pH는 $3.43{\sim}5.85$ 범위였으며 안동소주, 이강주, 마오타이츄, 문배술, 옛향-보리 등은 약 pH4.00이하 이었다. 총산은 마오타이츄가 매우 높았으며 일본의 센바타누키, 중국산 빠이걸, 북한산 백로술은 매우 낮은 값을 보였다. 우리나라 민속소주의 총산은 $11{\sim}88\;mg/100ml$였다. 첨가물이 있는 백로술, 빠이걸, 츄우예칭츄, 이강주의 전기전도도값이 매우 크게 나타났으며 증류주의 밀도는 $0.9121{\sim}1.0833\;g/ml$ 범위였고 백로술이 특이하게 1.0000 g/ml보다 높은 값을 보여 주었다. 증류주의 굴절률은 $1.3263{\sim}1.3610$ 범위였다. 우리나라 전통민속주들은 $274{\sim}278\;nm$ 부근에서 자외부 흡수극대를 나타내었고 스카치위스키, 진도홍주, 마오타이츄, 츄우예칭츄등 착색된 증류주는 넓은 파장 범위에서 강한 자외부흡수를 나타내었다. 물리화학적 특성값보다는 흡광도 자료에 대한 주성분 분석이 우리나라 민속소주와 중국산 카오리양츄를 서로 다른 집락으로 잘 나타내었다. 이러한 결과를 통하여 증류주의 품질관리, 분류동정, 유사성과 이질성 파악에 유익한 정보를 얻을 수 있었다.

  • PDF