• Title/Summary/Keyword: Mycorrhizal

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Two Unreported Glomeromycota Fungi Isolated from Rhizospheres of Smilax china (청미래덩굴의 근권에서 분리된 2종의 Glomeromycota 미기록종)

  • Park, Hyeok;Ka, Kang-Hyeon;Eom, Ahn-Heum
    • The Korean Journal of Mycology
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    • v.47 no.3
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    • pp.275-280
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    • 2019
  • We isolated fungal spores belonging to the phylum Glomeromycota from the rhizospheres of Smilax china, cultured in a greenhouse. We identified the isolated spores using sequence analysis of 18S partial rDNA region, internal transcribed spacer and 28S rDNA regions. We confirmed 2 unreported spores of Glomeromycota fungal species, Diversispora eburnea and Paraglomus laccatum. Here, we described the morphological characteristics and results of phylogenetic analysis of the confirmed species.

Seven Unrecorded Indigenous Fungi from Mudeungsan National Park in Korea

  • Minseo Cho;Sun Lul Kwon;Young Mok Heo;Young Min Lee;Hanbyul Lee;Changmu Kim;Byoung Jun Ahn;Jae-Jin Kim
    • Mycobiology
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    • v.50 no.4
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    • pp.203-212
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    • 2022
  • Fungi act as important decomposers in the forest environment. They recycle essential nutrients, promote plant growth through mycorrhizal relationships, and act as food for small animals. Samples of 265 indigenous fungal species were collected from Mudeungsan National Park in 2020. These species were identified based on morphological, molecular, and phylogenetic analyses using the internal transcribed spacer (ITS), nuclear large subunit rRNA (LSU), and RNA polymerase II second largest subunit (rpb2) regions. Subsequently, seven species were identified as unrecorded species in Korea: Cordyceps cicadae, Dentocorticium bicolor, Hymenochaete nanospora, Physisporinus crataegi, Rigidoporus piceicola, Russula raoultii, and Scutellinia crinita. This study reveals their detailed macro- and microscopic morphological characteristics with phylogenetic trees to report them as unrecorded species in Korea.

Biological Control of Oomycete Soilborne Diseases Caused by Phytophthora capsici, Phytophthora infestans, and Phytophthora nicotianae in Solanaceous Crops

  • Elena Volynchikova;Ki Deok Kim
    • Mycobiology
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    • v.50 no.5
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    • pp.269-293
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    • 2022
  • Oomycete pathogens that belong to the genus Phytophthora cause devastating diseases in solanaceous crops such as pepper, potato, and tobacco, resulting in crop production losses worldwide. Although the application of fungicides efficiently controls these diseases, it has been shown to trigger negative side effects such as environmental pollution, phytotoxicity, and fungicide resistance in plant pathogens. Therefore, biological control of Phytophthora-induced diseases was proposed as an environmentally sound alternative to conventional chemical control. In this review, progress on biological control of the soilborne oomycete plant pathogens, Phytophthora capsici, Phytophthora infestans, and Phytophthora nicotianae, infecting pepper, potato, and tobacco is described. Bacterial (e.g., Acinetobacter, Bacillus, Chryseobacterium, Paenibacillus, Pseudomonas, and Streptomyces) and fungal (e.g., Trichoderma and arbuscular mycorrhizal fungi) agents, and yeasts (e.g., Aureobasidium, Curvibasidium, and Metschnikowia) have been reported as successful biocontrol agents of Phytophthora pathogens. These microorganisms antagonize Phytophthora spp. via antimicrobial compounds with inhibitory activities against mycelial growth, sporulation, and zoospore germination. They also trigger plant immunity-inducing systemic resistance via several pathways, resulting in enhanced defense responses in their hosts. Along with plant protection, some of the microorganisms promote plant growth, thereby enhancing their beneficial relations with host plants. Although the beneficial effects of the biocontrol microorganisms are acceptable, single applications of antagonistic microorganisms tend to lack consistent efficacy compared with chemical analogues. Therefore, strategies to improve the biocontrol performance of these prominent antagonists are also discussed in this review.

Diversity and community structure of ectomycorrhizal mycorrhizal fungi in roots and rhizosphere soil of Abies koreana and Taxus cuspidata in Mt. Halla

  • Ji-Eun Lee;Ahn-Heum Eom
    • Mycobiology
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    • v.50 no.6
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    • pp.448-456
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    • 2022
  • In this study, the roots and rhizosphere soil of Abies koreana and Taxus cuspidata were collected from sites at two different altitudes on Mt. Halla. Ectomycorrhizal fungi (EMF) were identified by Illumina MiSeq sequencing. The proportion of EMF from the roots was 89% in A. koreana and 69% in T. cuspidata. Among EMF in rhizosphere soils, the genus Russula was the most abundant in roots of A. koreana (p < 0.05). The altitude did not affect the biodiversity of EMF communities but influenced fungal community composition. However, the host plants had the most significant effect on EMF communities. The result of the EMF community analysis showed that even if the EMF were isolated from the same altitudes, the EMF communities differed according to the host plant. The community similarity index of EMF in the roots of A. koreana was higher than that of T. cuspidata (p < 0.05). The results show that both altitude and host plants influenced the structure of EMF communities. Conifers inhabiting harsh sub-alpine environments rely strongly on symbiotic relationships with EMF. A. koreana is an endangered species with a higher host specificity of EMF and climate change vulnerability than T. cuspidata. This study provides insights into the EMF communities, which are symbionts of A. koreana, and our critical findings may be used to restore A. koreana.

Taxonomical History of Korean Mushrooms

  • Seok, Soon-Ja;Jin, Yong-Ju;Yoo, Ki-Bum;Hong, Seung-Beom;Kim, Yang-Sup
    • 한국균학회소식:학술대회논문집
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    • 2015.05a
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    • pp.19-19
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    • 2015
  • The term of Mushrooms means to spread like the April showers. After 18th century, the mycelium and spores of mushrooms were observed by microscope and then was denominated as fungi. About one hundred thousand species of mushrooms in appearance were worldly reported, and in Korea about four thousand species of mushrooms are estimated. In Korea, total of one thousand nine hundred one species of mushrooms have been recorded. Mushrooms belonging to the group of organisms called fungi, which must obtain their food from living plants or animals or from their remains after death. A large number of mushrooms grow in association with the roots of trees and other woody plants, called mycorrhizal fungi, both mushrooms and plants require this relationship for growth and development. And also many Mushrooms are saprobic, living on decayed various fallen leaves, twigs, trees and vegetable remains and etc. some of these million of spores settles on the proper habitat, these spores germinates and grows into a mass of threads, then a mycelium. This is the vegetable part of the mushrooms, what we call mushrooms are the carpophores, all the characteristics of the morphological features are appropriately used to identify species of mushrooms. Recently, identification and classification of mushrooms are newly confirmed by molecular analysis. In 2013, One thousand nine hundred one species of mushrooms in "List of Mushrooms in Korea" which published by the Korean Society of Mycology were recorded. Total of 238species, 107genera, 40families, 13orders, 6Classes belong to phylum Ascomycota. Total of 1,663species, 403genera 81families, 18orders, 7classes belong to phylum Basidiomycota.

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Analysis of Soil Microbial Communities Formed by Different Upland Fields in Gyeongnam Province

  • Kim, Min Keun;Ok, Yong Sik;Heo, Jae-Young;Choi, Si-Lim;Lee, Sang-Dae;Shin, Hyun-Yul;Kim, Je-Hong;Kim, Hye Ran;Lee, Young Han
    • Korean Journal of Soil Science and Fertilizer
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    • v.47 no.2
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    • pp.100-106
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    • 2014
  • The present study investigated variations in soil microbial communities by fatty acid methyl ester (FAME) and the chemical properties at 24 sites of upland soils in Gyeongnam Province. The electrical conductivity of the soil under potato cultivation was significantly higher than those of the red pepper and soybean soils (p < 0.05). The gram-negative bacteria community in potato soil was significantly lower than those in the garlic and soybean soils (p < 0.05). The communities of actinomycetes and arbuscular mycorrhizal fungi in the red pepper soil were significantly higher than those in the potato soil (p < 0.05). In addition, the cy17:0 to 16:$1{\omega}7c$ ratio was significantly lower in red pepper, soybean, and garlic soils compared with potato soil, indicating that microbial stress decreased. Consequently, differences in soil microbial community were highly associated with cultivated crop species, and this might be resulted from the difference in soil chemical properties.

Changing C-N Interactions in the Forest Floor under Chronic N Deposition: Implications for Forest C Sequestration

  • Park, Ji-Hyung
    • Journal of Ecology and Environment
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    • v.31 no.3
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    • pp.167-176
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    • 2008
  • Atmospheric N deposition has far-reaching impacts on forest ecosystems, including on-site impacts such as soil acidification, fertilization, and nutrient imbalances, and off-site environmental impacts such as nitrate leaching and nitrous oxide emission. Although chronic N deposition has been believed to lead to forest N saturation, recent evidence suggests that N retention capacity, particularly in the forest floor, can be surprisingly high even under high N deposition. This review aims to provide an overview of N retention processes in the forest floor and the implications of changing C-N interactions for C sequestration. The fate of available N in forest soils has been explained by the competitive balance between tree roots, soil heterotrophs, and nitrifiers. However, high rates of N retention have been observed in numerous N addition experiments without noticeable increases in tree growth and soil respiration. Alternative hypotheses have been proposed to explain the gap between the input and loss of N in N-enriched, C-limited systems, including abiotic immobilization and mycorrhizal assimilation, both of which do not require additional C sources to incorporate N in soil N pools. Different fates of N in the forest floor have different implications for C sequestration. N-induced tree growth can enhance C accumulation in tree biomass as observed across temperate regions. C loss from forests can amount to or outweigh C gain in N-saturated, declining forests, while another type of 'C-N decoupling' can have positive or neutral effects on soil C sequestration through hampered organic matter decomposition or abiotic N immobilization, respectively.

Diversity of Soil Microbial Communities Formed by Different Light Penetrations in Forests

  • Park, Jun Ho;Kim, Min Keun;Lee, Byung-Jin;Kim, HyeRan;Lee, Young Han;Cho, Young-Son
    • Korean Journal of Soil Science and Fertilizer
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    • v.47 no.6
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    • pp.496-499
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    • 2014
  • The present study investigated variations in soil microbial communities and the chemical properties of forest soils by differing amounts of penetrating sunlight. The soil temperature was significantly higher in higher light-penetrated soils. Higher light-penetrated soils (LP70) showed significantly more fungal communities than the lower light-penetrated soils (LP40 and LP50) (p < 0.05). The $NH_4$-N concentration in LP70 was significantly lower than those of LP40 and LP50, whereas the other chemical properties showed no significant difference among the soils. The cy19:0 to $18:1{\omega}7c$ ratio was significantly lower in LP70 than in LP 40 and LP50 showing the negative correlation of light level with microbial stresses (p < 0.05). The soil microbial communities and the chemical properties that showed positive eigenvector coefficients for PC1 were the fungi to bacteria, fungi, arbuscular mycorrhizal fungi, and Gram-positive bacteria, whereas negative eigenvector coefficients were found for $NH_4$-N, actinomycetes, Gram-negative bacteria, and bacteria. Consequently, the amount of penetrating light was responsible for microbial compositions in the forest soils in correlation with the concentration of $NH_4$-N and soil temperature.

Identification of Tricholoma matsutake in a Pine Root by ITS Region Amplification and RAPD Analysis with Different Mycorrhiza (ITS 영역 증폭에 의한 소나무 송이균 뿌리 감염 확인 및 RAPD에 의한 타 균근과의 비교)

  • Kim, Myungkil;Ryu, Sun-Hwa;Bak, Wonchull;Park, Hyun;Ka, Kang-Hyeon;Sohn, Hee-Kyung
    • Journal of the Korean Wood Science and Technology
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    • v.34 no.6
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    • pp.96-103
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    • 2006
  • A simple method for identifying of ectomycorrhizal fungi was presented, using the polymerase chain reaction (PCR) to amplify the ITS (Internal transcribed spacer) regions of the nuclear ribosormal repeat. The sequences analyzed 6 species, Pisolithus tinctorius, Chroogomphus rutilus, Leucogyrophana pinastri, Suillus granulatus, Lactarius laeticolorus, and Suillus bovinus at hongreung forest, and analysed 10 species, Craterellus lutescens, Thelephoroid mycorrhizal, Lactarius quieticolor, Tricholoma matsutake, Lactarius chrysorrheus, Sarcodon aspratus, Russula versicolor, Suillus luteus, Tricholoma terreum, and Amanita vaginata at hongcheon forest. Finally, the amplification by PCR with ITS1-ITS4 primers offers good results over classical identification for ectomycorrhizal fungi species.

Factors related to the growth of arbuscular mycorrhizal fungi in the plant roots (식물뿌리에서 Arbuscular 내생균근 균의 성장에 작용하는 요인들)

  • Lee, Sang-Sun;Eom, Ahn-Heum;Lee, Seok-Koo
    • The Korean Journal of Mycology
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    • v.22 no.2
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    • pp.160-171
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    • 1994
  • Microscopic observations of arbuscular mycorrhizae (AM) were done with the colonizations of AM and the determinations of chitin in the plant roots of Sorghum bicolor, Cassia mimosoides, Capsicum annuum and Allium fistulosum. The intercellular and intracellular hyphae, arbuscules and vesicles were microscopically observed, according to increases of colonization of AM in the roots of four plants. The growth of AM fungi appeared sigmoid with the cultivation days after inoculation. The growth of AM fungi were inversely influenced by the additions of commercial fertilizers, P

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