• Title/Summary/Keyword: Morphological patterns

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Semi-Automatic Construction of Morphological Pattern Dictionary using the Method of Morphological Synthesis (형태소 합성 기법을 이용한 형태소 패턴 사전의 반자동 구축)

  • Park, In-Cheol
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.12 no.11
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    • pp.5278-5283
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    • 2011
  • One approach for very high speed korean morphological analysis is to use pre-built morphological results in dictionary. It pays the high cost to build this morphological pattern dictionary manually, besides the dictionary may contain errors. This paper proposes a method to generate morphological patterns automatically using Korean morphological synthesis. The experiment shows that we automatically generate 86% morphological patterns for analyzing Korean sentences. It takes 52.68 seconds for the morphological system using the patterns to analyze 403MB Korean corpus on 2.8GHz Window system.

Patterns of morphological variation in the Schlegel's Japanese gecko (Gekko japonicus) across populations in China, Japan, and Korea

  • Kim, Dae-In;Park, Il-Kook;Ota, Hidetoshi;Fong, Jonathan J.;Kim, Jong-Sun;Zhang, Yong-Pu;Li, Shu-Ran;Choi, Woo-Jin;Park, Daesik
    • Journal of Ecology and Environment
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    • v.43 no.4
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    • pp.332-340
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    • 2019
  • Background: Studies of morphological variation within and among populations provide an opportunity to understand local adaptation and potential patterns of gene flow. To study the evolutionary divergence patterns of Schlegel's Japanese gecko (Gekko japonicus) across its distribution, we analyzed data for 15 morphological characters of 324 individuals across 11 populations (2 in China, 4 in Japan, and 5 in Korea). Results: Among-population morphological variation was smaller than within-population variation, which was primarily explained by variation in axilla-groin length, number of infralabials, number of scansors on toe IV, and head-related variables such as head height and width. The population discrimination power was 32.4% and in cluster analysis, populations from the three countries tended to intermix in two major groups. Conclusion: Our results indicate that morphological differentiation among the studied populations is scarce, suggesting short history for some populations after their establishment, frequent migration of individuals among the populations, and/or local morphological differentiation in similar urban habitats. Nevertheless, we detected interesting phenetic patterns that may predict consistent linkage of particular populations that are independent of national borders. Additional sampling across the range and inclusion of genetic data could give further clue for the historical relationship among Chinese, Japanese, and Korean populations of G. japonicus.

Exploring the Applicability of Grain Size Trend Analysis to Understanding the Morphological Responses of the Deltaic Barrier Islands in the Nakdong River (낙동강 삼각주연안 사주섬의 지형변화에 대한 입도경향 분석의 활용도 탐색)

  • Kim, Sung-Hwan;Rhew, Ho-Sahng
    • Journal of the Korean association of regional geographers
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    • v.13 no.2
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    • pp.119-128
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    • 2007
  • Grain-size trend analysis is the methodology to obtain the net sediment transport pattern from the spatial trends of grain size parameters. It has the potentials to be an effective tool to address the morphological changes of the deltaic barrier islands in the Nakdoog River once we make sure net transport patterns inferred from grain size trend analysis represent the morphological evolution patterns. This research aims to investigate the applicability of the net transport patterns obtained by 'transport vector', proposed by Gao and Collins(1992), to understanding the morphological changes of the Nakdong River deltaic barrier islands. The results indicate that the net transport directions are overall in concordance with the morphological evolution patterns; however, the level of concordance is low in the island with fast growing rate. The reasons may be match or mismatch of temporal scales involved between processes represented by net transport patterns and morphological change analyzed or the rate of morphological change. Consequently, the application of grain size trend analysis in analyzing the morphological changes of deltaic barrier islands requires the careful consideration of temporal scales involved.

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Taxonomic Position and Affinities of Isopyrum mandshuricum within Korean Isopyroideae (Ranunculaceae) Based on Molecular Data

  • Lee, Nam-Sook;Yeau, Sung-Hee;Kim, Ji-Hyun;Kim, Min-Ju
    • Animal cells and systems
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    • v.3 no.2
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    • pp.133-141
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    • 1999
  • To examine the taxonomic position and affinities of Isopyrum mandshuricum (Ranunculaceae) and related taxa, genetic analysis were carried out on the basis of isozyme patterns and ITS sequences. Molecular data, both isozyme patterns and ITS sequences suggest that I. mandshuricum is closely related to Enemion raddeanum than to Semiaquilegia adoxoides. The estimation of genetic identities by isozyme analysis reveals that I. manshuricum is genetically distant from E. raddeanum. The phylogenetic tree based on molecular data is rather congruent with the phenogram based on quantitative morphological characteristics, but not consistent with one based on qualitative morphological characteristics. Incongruencies between molecular and qualitative morphological data provide clues to re-evaluate several morphological features.

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Control of Morphological Development and Transformation of Curves (곡선의 형태학적 성장과 변환의 제어 방법)

  • Lee, Joo-Haeng;Park, Hyung-Jun
    • Korean Journal of Computational Design and Engineering
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    • v.12 no.5
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    • pp.354-365
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    • 2007
  • We present novel methods to generate a sequence of shapes that represents the pattern of morphological development or transformation of Bezier curves. The presented methods utilize the intrinsic geometric structures of a Bezier curve that are derived from rib and fan decomposition (RFD). Morphological development based on RFD shows a characteristic pattern of structural growth of a Bezier curve, which is the direct consequence of development path defined by fans. Morphological transformation based RFD utilizes development patterns of source and target curves to mimic the theory of evolutionary developmental biology: although the source and target curves are quite different in shapes, we can easily find similarities in their younger shapes, which makes it easier to set up feature correspondences for blending them. We also show that further controls on base transformation for intensity of feature blending, and extrapolation can compensate the immaturity of blended curves. We demonstrate the experimental results where transformation patterns are smoother and have unique geometric style that cannot be generated using conventional methods based on multi-linear blending.

Molecular Identification Patterns of Clinical Isolates from Korean Patients Infected with Dermatopbytes

  • Kim, Sang-Ha;Cho, Seong-Wan;Hwang, Seock-Yeon;Jeon, Soo-Young;Kim, Young-Kwon
    • Biomedical Science Letters
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    • v.16 no.3
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    • pp.187-192
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    • 2010
  • The aim of this study was to compare the results of morphological phenotypic examination and molecular biological method, randomly amplified polymorphic DNA (RAPD) using clinical isolates from Korean patients infected with dermatophytes. A total of 44 clinical isolates have been collected by Korean Collection Medical Fungi (KCMF) and those were subjected for the RAPD analysis. The results showed that the fungal strains that have RG1 band patterns were identified as Trichophyton rubrum by the neighbour-joining analysis. Additionally, other fungal strains that have RG3 band patterns were identified as Epidermophyton floccosum and RG5 band patterns were identified as Micorsporum gypseum. Even though molecular biological method such as RAPD are not necessary, it might be useful when some strains have similar morphological characteristics or when same species has phenotypic variations. In this study, therefore, we targeted internal transcribed spacer (ITS) regions of fungal rDNA, performed RAPD and then compared with morphological phenotypic examination.

Morphological classification, anatomical variations, innervation patterns, musculocutaneous nerve relation of the coracobrachialis muscle: anatomical study and clinical significance

  • Ashraf Youssef Nasr;Rawan Ashraf Youssef
    • Anatomy and Cell Biology
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    • v.57 no.2
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    • pp.194-203
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    • 2024
  • The anatomical variations of coracobrachialis muscle (CBM) are of great clinical importance. This study aimed to elucidate the morphological variations, innervation patterns and musculocutaneous nerve (MCN) relation to CBM. Upper limbs of fifty cadavers (30 males and 20 females) were examined for proximal and distal attachments, innervation pattern of CBM and its relation to MCN. Four morphological types of CBM were identified according to number of its heads. The commonest type was the two-headed (63.0%) followed by the single belly (22.0%), three-headed (12.0%) and lastly four-headed (3.0%) type. Moreover, an abnormal insertion of CBM was observed in four left limbs (4.0%); one inserting into the medial humeral epicondyle, the second into the upper third of humeral shaft, the third one in the common tendon of biceps, and the fourth one showing a bifurcated insertion. Also, four different innervation patterns of CBM were identified including MCN (80.0%), lateral cord (14.0%), lateral root of median nerve (4.0%), and median nerve itself (2.0%). The course of MCN was superficial to the single belly CBM (19.0%) and in-between the heads in the other types (71.0%). Measurements of the length and original distance of CBM muscular branches originating from MCN revealed no sex or side significant difference. Awareness of the anatomic variations, innervation patterns, and MCN relation of CBM is imperative in recent diagnostic and surgical procedures to obtain definite diagnosis, effective management and good outcome.

Morphological and Genetic Characteristics of Pearl-spot Damselfish Chromis notata (Teleostei: Pomacentridae) in Coastal Waters of East Sea (Sea of Japan) and Jejudo (제주도와 동해 근해에 서식하는 자리돔(Chromis notata)의 형태와 유전특성 비교)

  • Shin, Hye Jeong;Kim, Sun Wook;Choi, Young-Ung
    • Ocean and Polar Research
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    • v.36 no.2
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    • pp.189-197
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    • 2014
  • The pearl-spot damsel, Chromis notata, is one of the important fishery species in Korea. While C. notata has been commonly harvested in southern Korea, the increasing number of C. notata in higher latitudes has crucial ecological, economic and evolutionary implications under conditions where the climate is rapidly changing. Here we examined the morphological and genetic characteristics of C. notata to assess patterns of geographical variations among the groups from three different sites. The groups were clearly distinguishable in the analysis of morphological characteristics. On the other hand, the groups were genetically indistinguishable. All individuals fell within a single clade in the neighbor-joining tree but appeared scattered in the haplotype network. Several haplotypes are shared among the sampling sites (Jejudo-Ulleungdo; Hap 9, Wangdolcho-Ulleungdo; Hap 28, Hap 33, Hap 34). Although control region markers did not elucidate the spatial patterns in genetic characteristics, Wangdolcho and Ulleungdo groups appear to exhibit a more robust gene flow between the two groups than with Jejudo group. Integrative approaches such as those combining morphological and genetic analyses minimize potential errors caused by limited perspectives of each analysis and can provide useful information for discovering functional DNA regions attributable to morphological characteristics expressions.

Hypothetical Speciation Scenario of Subgenus Psalidoremus (Coleoptera: Lucanidae) by Morphological Traits and Geographical Patterns

  • Kim, Eunjoong
    • Proceedings of the National Institute of Ecology of the Republic of Korea
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    • v.3 no.1
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    • pp.41-46
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    • 2022
  • Psalidoremus is one of the subgenus which consists of five species and eleven subspecies through Taiwan, Japan, Korea and north eastern part of China which present strong endemism to their distribution. While most of advance studies focus on the new species or subspecies from this taxon, this paper suggests paleogeographical assumption and hypothesis of how they diverged from common ancestors. Phylogeographical patterns illustrated by the distribution of five species, which including Prosopocoilus inclinatus, Prosopocoilus hachijoensis, Prosopocoilus dissimilis, Prospocoilus pseudodissimilis, Prosopocoilus motschulskii respectively, has been assessed in this research. Speciation history is suggested by morphological tendencies especially in male mandibles with assumption from geographical patterns of under sea level.

Role of the Mdm2 SNIP 309 Polymorphism in Gastric Mucosal Morphologic Patterns of Patients with Helicobacter pylori Associated Gastritis

  • Tongtawee, Taweesak;Dechsukhum, Chavaboon;Leeanansaksiri, Wilairat;Kaewpitoon, Soraya;Kaewpitoon, Natthawut;Loyd, Ryan A;Matrakool, Likit;Panpimanmas, Sukij
    • Asian Pacific Journal of Cancer Prevention
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    • v.17 no.3
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    • pp.1057-1060
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    • 2016
  • Background: The tumor suppressor p53 is as a regulator of cell proliferation, apoptosis and many other biological processes as well as external and internal stress responses. Mdm2 SNIP309 is a negative regulator of 53. Therefore, this study aimed to determine the role of the Mdm2 SNIP 309 polymorphism in the gastric mucosal morphological patterns in patients with Helicobacter pylori associated gastritis. Materials and Methods: A prospective cross-sectional study was carried out from November 2014 through November 2015. Biopsy specimens were obtained from patients and infection was proven by positive histology. Gastric mucosa specimens were sent to the Molecular Genetics Unit, Institute of Medicine, Suranaree University of Technology where they were tested by molecular methods to detect the patterns of Mdm2 SNIP 309 polymorphism using the real-time PCR hybridization probe method. The results were analyzed and correlated with gastric mucosal morphological patterns by using C-NBI endoscopy. Results: A total of 300 infected patients were enrolled and gastric mucosa specimens were collected. In this study the percentage of Mdm2 SNIP 309 T/T homozygous and Mdm2 SNIP309 G/T heterozygous was 78% and 19 % respectively whereas Mdm2 SNIP309 G/G homozygous was 3%. Mdm2 SNIP 309 T/T homozygous and Mdm2 SNIP309 G/T heterozygosity correlated with type 1 to type 3 gastric mucosal morphological patterns (P<0.01) whereas Mdm2 SNIP309 G/G homozygous correlated with type 4 and type 5 (P<0.01). Conclusions: Our study finds the frequency of Mdm2 SNIP309 G/G in a Thai population is very low, and suggests that this can explain ae Thailand enigma. Types 1 to type 3 are the most common gastric mucosal morphological patterns according to the unique genetic polymorphism of MDM2 SNIP 309 in the Thai population.