• Title/Summary/Keyword: Matrix degradation

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PF-GEMV: Utilization maximizing architecture in fast matrix-vector multiplication for GPT-2 inference

  • Hyeji Kim;Yeongmin Lee;Chun-Gi Lyuh
    • ETRI Journal
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    • v.46 no.5
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    • pp.817-828
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    • 2024
  • Owing to the widespread advancement of transformer-based artificial neural networks, artificial intelligence (AI) processors are now required to perform matrix-vector multiplication in addition to the conventional matrix-matrix multiplication. However, current AI processor architectures are optimized for general matrix-matrix multiplications (GEMMs), which causes significant throughput degradation when processing general matrix-vector multiplications (GEMVs). In this study, we proposed a port-folding GEMV (PF-GEMV) scheme employing multiformat and low-precision techniques while reusing an outer product-based processor optimized for conventional GEMM operations. This approach achieves 93.7% utilization in GEMV operations with an 8-bit format on an 8 × 8 processor, thus resulting in a 7.5 × increase in throughput compared with that of the original scheme. Furthermore, when applied to the matrix operation of the GPT-2 large model, an increase in speed by 7 × is achieved in single-batch inferences.

Matrix Metalloproteinases, New Insights into the Understanding of Neurodegenerative Disorders

  • Kim, Yoon-Seong;Joh, Tong-H.
    • Biomolecules & Therapeutics
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    • v.20 no.2
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    • pp.133-143
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    • 2012
  • Matrix metalloproteinases (MMPs) are a subfamily of zinc-dependent proteases that are re-sponsible for degradation and remodeling of extracellular matrix proteins. The activity of MMPs is tightly regulated at several levels including cleavage of prodomain, allosteric activation, com-partmentalization and complex formation with tissue inhibitor of metalloproteinases (TIMPs). In the central nervous system (CNS), MMPs play a wide variety of roles ranging from brain devel-opment, synaptic plasticity and repair after injury to the pathogenesis of various brain disorders. Following general discussion on the domain structure and the regulation of activity of MMPs, we emphasize their implication in various brain disorder conditions such as Alzheimer's disease, multiple sclerosis, ischemia/reperfusion and Parkinson's disease. We further highlight accumu-lating evidence that MMPs might be the culprit in Parkinson's disease (PD). Among them, MMP-3 appears to be involved in a range of pathogenesis processes in PD including neuroinflamma-tion, apoptosis and degradation of ${\alpha}$-synuclein and DJ-1. MMP inhibitors could represent poten-tial novel therapeutic strategies for treatments of neurodegenerative diseases.

Caveolin-1 inhibits membrane-type 1 matrix metalloproteinase activity

  • Kim, Hye-Nan;Chung, Hye-Shin
    • BMB Reports
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    • v.41 no.12
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    • pp.858-862
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    • 2008
  • Membrane-type 1 matrix metalloproteinase (MT1-MMP) is a zinc-dependent proteinase found in cholesterol-rich lipid rafts on the plasma membrane. MT1-MMP hydrolyzes extracellular matrix (ECM) proteins, activates pro-matrix metalloproteinase-2 (proMMP-2) and plays an important role in ECM remodeling, cancer cell migration and metastasis. The role of caveolin-1, an integral protein of caveolae, in the activation of MT1-MMP remains largely unknown. Here, we show that the expression of caveolin-1 attenuates the activation of proMMP-2, reduces proteolytic cleavage of ECM and inhibits cell migration. We utilized the cytoplasmic tail domain deletion (${\Delta}CT$) or the E240A mutant of MT1-MMP. Co-expression of caveolin-1 with the wild-type or the ${\Delta}CT$ MT1-MMP decreased the proMMP-2 activation and inhibited collagen degradation and cell migration. Caveolin-1 had no effect on the catalytically inert E240A MT1-MMP. Our findings suggest that caveolin-1 is essential in the down-regulation of MT1-MMP activity by promoting internalization from the cell surface.

Effect of Cinnamomum Cassia on Cartilage Protection in Rabbit and Human Articular Cartilage

  • Baek, Yong-Hyeon;Huh, Jeong-Eun;Lee, Jae-Dong;Choi, Do-Young;Park, Dong-Suk
    • The Journal of Korean Medicine
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    • v.28 no.4
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    • pp.148-157
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    • 2007
  • Background & Objective: Articular cartilage is a potential target for drugs designed to inhibit the activity of matrix metalloproteinases (MMPs) to stop or slow the destruction of the proteoglycanand collagen in the cartilage extracellular matrix. The purpose of this study was to investigate the effects of Cinnamomum cassia in inhibiting the release of glycosaminoglycan (GAG), the degradation of collagen, and MMP activity in rabbit and human articular cartilage explants. Methods: The cartilage-protective effects of Cinnamomum cassia were evaluated by using glycosaminoglycan degradation assay, collagen degradation assay, colorimetric analysis of MMP activity, measurement of lactate dehydrogenase activity and histological analysis in rabbit cartilage explants culture. Results: Interleukin-1a (IL-1a) rapidly induced GAG, but collagen was much less readily released from cartilage explants. Cinnamomum cassia significantly inhibited GAG and collagen release in a concentration-dependent manner. Cinnamomum cassia dose-dependently inhibited MMP-1, MMP-3 and MMP-13 activities from IL-1a-treated cartilage explants culture when tested at concentrations ranging from 0.02 to 1 mg/ml. Conclusion : These results indicate that Cinnamomum cassia inhibits the degradation of proteoglycan and collagen through the down regulation of MMP-1, MMP-3 and MMP-13 activities of IL-1a-stimulated rabbit and human articular cartilage explants.

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Development of Specific Organ-Targeting Drug Delivery System (III)-In Vitro Study on Liver-Targeting Adriamycin Delivery System using Human Serum Albumin Microspheres- (장기표적용 약물수송체의 개발에 관한 연구(제 3보 -알부민 미립구를 이용한 Adriamycin의 간 표적용 수송체에 관한 in vitro 연구-)

  • Kim, Chong-Kook;Hwang, Sung-Joo;Yang, Ji-Sun
    • Journal of Pharmaceutical Investigation
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    • v.19 no.4
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    • pp.195-202
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    • 1989
  • In attempt to improve the chemotherapeutic activity of adriamycin, adriamycin-entrapped HSA microspheres were prepared and investigated by the various in vitro experiments. The shape, surface characteristics and size distribution of HSA microspheres are observed by scanning electron microscopy. The in vitro drug release, albumin matrix degradation by protease of HSA microspheres were studied. The shape of HSA microspheres were spherical and the surface was smooth and compact. The size of HSA microspheres ranged from 0.4 to $2.5\;{\mu}m$ and have average diameters of 0.5 to $0.7\;{\mu}m$. The size distribution of HSA microspheres prepared by ultrasonication was mainly affected by albumin concentration and heating time in the process of hardening. In in vitro, almost all adriamycin was released from HSA microspheres for 8 hr. Analysis of the resulting adriamycin release profiles demonstrated that adriamycin is released from the microspheres in two distinct steps, a fast phase (until 30 min) followed by a much slower sustained release phase. Drug release, which is due to diffusion, was depended on the rate of matrix hydration. Drug release was largely affected by albumin concentration and heating temperature during the process of hardening. Albumin matrix degradation of HSA microspheres was affected by heating temperature and albumin concentration. Higher temperature and longer times generally produce harder, less porous, and slowly degradable microspheres.

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Evaluation of degradation in aged 2.25CrMo steel by electrical resistivity, magnetic Barkhausen noise and carbide analysis (전기비저항, 바크하우젠노이즈 및 탄화물 분석법을 이용한 2.25Cr-1Mo 강의 열화도 평가)

  • Byeon, Jai-Won;Pyo, S.W.;Kwun, S.I.
    • Proceedings of the KSME Conference
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    • 2001.11a
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    • pp.210-215
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    • 2001
  • The ferritic 2.25CrMo steel has been used for high temperature structure applications such as turbine rotors, boilers and pressure vessels in fossil plant and petroleum chemical facilities. However, this steel is known to result in aging degradation due to temper embrittlement, carbide induced brittleness and softening of matrix after long time exposure to high temperature. This research investigated the microstructural and mechanical changes after artificial degradation treatment and evaluated the degree of degradation by several nondestructive methods. The decrease of electrical resistivity and increase of magnetic Barkhausen noise(RMS voltage) with increasing aging time were observed. The change of electrical resistivity and Barkhausen noise showed a good correlation with the ductile-brittle transition temperature.

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Weighted Hadamard 변환을 이용한 Image Data 처리에 관한 연구

  • 소상호;윤재우;이문호
    • Proceedings of the Korean Institute of Communication Sciences Conference
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    • 1983.10a
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    • pp.68-72
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    • 1983
  • The Hadamard matrix is a symmetric matrix made of plus and minus ones as entries. There fore the use of Hadamard transform in the image processing requires only the real number operations and results in the computational advantages. Recently, However, certain degradation aspects have been reported. In this paper we propose a WH matrix which retains the main properties of Hadamard matrix. The actual improvement of the image transmission in the inner part of the picture has been demonstrated by the computer simulated image developments. The orthogonal transform offers a useful facility in the digital signal processing. As the size of the transmission block increases, however, the assigment of bits for each data must increase exponentially. Thus the SNR of the image tends to decline accordingly. As an attempt to increase the SNR, we propose the WH matrix whose elements are made of $\pm$1, $\pm$2, $\pm$3, and the unitform is 8$\times$8 matrix.

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Evaluation of Hydride Effect on Fuel Cladding Degradation (피복관 열화거동에 미치는 수소화물 영향 평가)

  • Kim, Hyun-Gil;Kim, Il-Hyun;Park, Sang-Yoon;Park, Jeong-Yong;Jeong, Yong-Hwan
    • Korean Journal of Metals and Materials
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    • v.48 no.8
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    • pp.717-723
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    • 2010
  • The degradation behavior of fuel cladding is a very import concern in nuclear power generation, because the operation of nuclear plants can be limited by fuel cladding degradation. In order to evaluate the hydride effect on failure of zirconium fuel claddings, a ring tensile test for the circumferential direction was carried out at room temperature for claddings having different hydride characteristics such as density and orientation; microstructural evaluation was also performed for those claddings. The circumferential failure of the claddings was promoted by increasing the hydride concentration in the matrix; however, the failure of the claddings was affected by the hydride orientation rather than by the hydride concentration in the matrix. From fracture surface observation, the cladding failure during the ring tensile test was matched with the hydride orientation.

Viscum album and its Constituents Downregulate MMP-13 Expression in Chondrocytes and Protect Cartilage Degradation

  • Lee, Ju Hee;Kwon, Yong Soo;Jung, Da Young;Kim, Na Young;Lim, Hyun;Kim, Hyun Pyo
    • Natural Product Sciences
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    • v.27 no.3
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    • pp.151-160
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    • 2021
  • Under some pathological conditions such as osteoarthritis, matrix metalloproteinases (MMPs) including MMP-13 have an important role in degrading cartilage materials. When the regulatory effects of some herbal extracts on MMP-13 expression were examined to evaluate the cartilage-protective potential, the ethanol extract of the radix of Viscum album was found to strongly downregulate MMP-13 induction in IL-1β-treated chondrocytes, SW1353 cells. Based on this finding, activity-guided separation was carried out, which yielded five constituents identified as 3,5-dihydroxy-1,7-bis(4-hydroxyphenyl)heptane (1), hesperetin-7-glucoside (2), syringin (3), homoflavoyadorinin B (4), and 4,4'-dihydroxy-3,6'-dimethoxychalcone-2'-glucoside (5). Of these, 1 and 5 significantly inhibited MMP-13 expression in SW1353 cells, with 5 being the most potent. Compound 5, a chalcone derivative, showed the downregulation of MMP-13 at 20 - 100 μM. The mechanism study revealed that 5 exerted MMP-13 down-regulatory action, at least in part, by interrupting the signal transducer and activator of transcription 1 (STAT1) activation pathway. Furthermore, this compound protected against cartilage degradation in an IL-1-treated rabbit cartilage explant culture. All these findings demonstrated for the first time that Viscum album and its constituents, especially chalcone derivative (5), possessed cartilage-protective activity. These natural products may have the potential for alleviating cartilage degradation.

Activities of Recombinant MT1-MMP Expressed in PANC-1 Cells. (PANC-1세포에서 발현된 재조합 MT1-MMP의 효소 활성)

  • Kim, Hye-Nan;Chung, Hye-Shin
    • Journal of Life Science
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    • v.18 no.3
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    • pp.422-425
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    • 2008
  • Membrane-type 1 matrix metalloproteinase (MT1-MMP) is a membrane-associated zinc-dependent endoproteinase involved in extracellular matrix remodeling. MT1-MMP hydrolyzes ECM proteins like collagen and is involved in cancer cell migration and metastasis. Caveolins are integral membrane proteins and play a role in formation of caveolae, specialized membrane microdomains involved in clathrin-independent endocytosis. Recombinant MT1-MMP was transiently expressed in PANC-1 cells. Cells expressing recombinant MT1-MMP were able to hydrolyze collagen and migrate on collagen coated trans-well. Both subjacent collagen degradation and the cell migration conferred by recombinant MT1-MMP were inhibited by co-transfection of plasmids containing caveolin-1 cDNA. The results support that MT1-MMP is localized in lipid raft of the membrane and MT1-MMP activities in invasive cells could be inhibited by caveolin.