• Journal of Microbiology and Biotechnology
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• 제17권5호
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• pp.868-872
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• 2007

H1N2 influenza viruses are circulating in pigs worldwide and cause considerable economic losses to the pig industry. We genetically analyzed the genes of our isolates from Korean pigs, and compared the antigenicity of our isolates with swine H1N2 viruses isolated from pigs in the U.S.A. In addition, we serologically surveyed the infection rate of swine H1N2 viruses in pigs. We found that H1N2 isolates from Korean pigs are genetically more related to swine H1N2 viruses isolated from pigs in the U.S.A. than those in European countries. When antigenicity was compared, our isolates were weakly reacted to antibodies against swine H1N2 viruses isolated from pigs in the U.S.A. The serological surveillance using sera from pigs in Korea showed that about 46% was positive for H1N2 viruses. Our results suggest that swine H1N2 viruses are widespread in Korean pigs, and the development of a vaccine against H1N2 viruses may help to control their infection in pigs.

• Tuberculosis and Respiratory Diseases
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• 제59권5호
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• pp.497-503
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• 2005

연구배경 : 호흡기 바이러스 감염은 천식 및 만성폐쇄성폐질환의 악화와 관련이 있다고 알려져 있지만 국내의 자료는 충분치 않다. 방 법 : 급성 악화로 한림대학교 성심병원에 내원한 천식환자 20명과 COPD 환자 24명을 대상으로 비강 분비물과 객담에서 PCR과 배양을 통해 호흡기 바이러스를 검출하였다. rhinovirus, coronavirus는 PCR을, influenza A, B, RSV, parainfluenza virus는 배양을 통해 바이러스를 검출하였다. 결 과 : 천식의 급성 악화로 내원한 환자의 평균 연령은 45.4(${\pm}16.7$)세였고, 평소 $FEV_1/FVC$는 1.9/2.9L(65.5%)였다. 급성 악화 시 13예(13/20, 65%)에서 바이러스가 검출되었으며 rhinovirus 9예, coronavirus 2예, influenza A 2예, RSV 1예, parainfluenza virus가 1예였다. rhinovirus와 coronavirus, rhinovirus와 RSV가 동시에 검출된 예가 각각 1예가 있었다. COPD 환자의 평균 연령은 71.5(${\pm}8.4$)세였으며, 평소 $FEV_1/FVC$는 1.1/2.6L(42.3%)였고, 악화 시 14예(14/24, 58.3%)에서 바이러스가 검출되었다. rhinovirus 10예, coronavirus 3예, influenza A가 4예였으며 2예에서 rhinovirus와 coronavirus가 동시에 검출되었고, 1예에서 rhinovirus와 influenza A가 동시에 검출되었다. 결 론 : 호흡기 바이러스 감염은 국내에서도 천식 및 COPD 악화의 주요한 요인이 될 것으로 생각되며, 천식 및 COPD 환자의 악화에서 치료에 있어서 항생제 사용에 주의하여야 할 것으로 사료된다.

• Molecules and Cells
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• 제40권5호
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• pp.339-345
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• 2017

Retroviral and lentiviral vectors are mostly pseudotyped and often purified and concentrated via ultracentrifugation. In this study, we quantified and compared the stabilities of retroviral [murine leukemia virus (MLV)-based] and lentiviral [human immunodeficiency virus (HIV)-1-based] vectors pseudotyped with relatively mechanically stable envelope proteins, vesicular stomatitis virus glycoproteins (VSVGs), and the influenza virus WSN strain envelope proteins against ultracentrifugation. Lentiviral genomic and functional particles were more stable than the corresponding retroviral particles against ultracentrifugation when pseudotyped with VSVGs. However, both retroviral and lentiviral particles were unstable when pseudotyped with the influenza virus WSN strain envelope proteins. Therefore, the stabilities of pseudotyped retroviral and lentiviral vectors against ultracentrifugation process are a function of not only the type of envelope proteins, but also the type of viral internal core (MLV or HIV-1 core). In addition, the fraction of functional viral particles among genomic viral particles greatly varied at times during packaging, depending on the type of envelope proteins used for pseudotyping and the viral internal core.

• Genomics & Informatics
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• 제20권3호
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• pp.37.1-37.1
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• 2022

• 한국산학기술학회논문지
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• 제20권7호
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• pp.127-132
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• 2019

인플루엔자는 인플루엔자 바이러스에 의해 발생하는 급성 호흡기 질환으로 고열, 두통 등을 유발하는 질병이다. 인플루엔자는 특히 변이를 통하여 다 종의 아형을 만들어, 스페인 독감과 같이 수천만 명의 사망자를 내는 등 인류에 심각한 위협을 미치고 있다. 이러한 인플루엔자는 감염 이후에 신속한 진단 검사를 통하여 항바이러스 사용이 필수적인데, 이를 위하여 일반적으로 응급 상황에서 신속하게 진단을 할 수 있는 면역크로마토그래피 기반의 인플루엔자 간이 진단 키트를 사용한다. 본 논문에서는 응급상황에서 준 의료인 등이 인플루엔자 감염이 의심되는 다수의 환자 검진을 가능하게 할 수 있도록 영상 기반의 인플루엔자 판독 기법을 개발한다. 특히 영상 기반의 인플루엔자 판독 시, 판독하는 광원 환경에 따라 발생하는 오류를 최소화하기 위하여 결합 누적 분포 함수 기반의 색상 변환을 통하여 광원의 영향을 최소화하는 알고리즘을 제안한다. 다양한 밝기 변환, 색 온도 등의 환경 조건을 가지는 90개의 실험군에 대하여 본 연구에서 제안하는 알고리즘이 다양한 광원 환경에서 강인함을 확인한다.

• Journal of Microbiology and Biotechnology
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• 제26권4호
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• pp.684-692
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• 2016

Acute respiratory virus infectious diseases are a growing health problem, particularly among children and the elderly. Much effort has been made to develop probiotics that prevent influenza virus infections by enhancing innate immunity in the respiratory tract until vaccines are available. Lactobacillus plantarum GB-LP2, isolated from a traditional Korean fermented vegetable, has exhibited preventive effects on influenza virus infection in mice. To identify the molecular basis of this strain, we conducted a whole-genome assembly study. The single circular DNA chromosome of 3,284,304 bp was completely assembled and 3,250 protein-encoding genes were predicted. Evolutionarily accelerated genes related to the phenotypic trait of anti-infective activities for influenza virus were identified. These genes encode three integral membrane proteins, a teichoic acid export ATP-binding protein and a glucosamine - fructose-6-phosphate aminotransferase involved in host innate immunity, the nonspecific DNA-binding protein Dps, which protects bacteria from oxidative damage, and the response regulator of the three-component quorum-sensing regulatory system, which is related to the capacity of adhesion to the surface of the respiratory tract and competition with pathogens. This is the first study to identify the genetic backgrounds of the antiviral activity in L. plantarum strains. These findings provide insight into the anti-infective activities of L. plantarum and the development of preventive probiotics.

• 대한수의학회지
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• 제63권4호
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• pp.41.1-41.6
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• 2023

Many viruses can infect different types of birds, with poultry being the most susceptible. These viral diseases have a direct negative impact on the poultry industry, with significant economic losses. This study examined a group of the most important viruses that infect backyard chickens in 2 specific areas of Basrah Governorate, south of Iraq. The study analyzed avian influenza viruses (AIVs), Newcastle disease virus (NDV), and infectious bronchitis virus (IBV). Two hundred and ninety oropharyngeal swabs, 150 from Abu Al-Khasib and 140 from Shatt Al-Arab regions in the Basrah governorate, were obtained from backyard chickens with clear respiratory signs. The samples were subjected to viral RNA extraction, and the viral nucleic acids were detected using a reverse transcriptase polymerase chain reaction technique. The overall rate of viral infections was 74.8%, which varied depending on the type of virus: 15.8%, 31.3%, and 27.5% for AIV, NDV, and IBV, respectively. The NDV and IBV had much higher infection rates than that of AIV. In addition, the prevalence of AIV in the Shatt Al Arab district was significantly higher than in the Abul Khasib district. Moreover, there were no significant differences between the NDV and the IBV distributions in either of the targeted regions in this study.

• 한국진공학회:학술대회논문집
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• 한국진공학회 2013년도 제45회 하계 정기학술대회 초록집
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• pp.273-273
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• 2013

Recently, Point-of-care (POC) testing microdevices enable to do the patient monitoring, drug screening, pathogen detection in the outside of hospital. Immunochromatographic strip (ICS) is one of the diagnostic technologies which are widely applied to POC detection. Relatively low cost, simplicity to use, easy interpretations of the diagnostic results and high stability under any circumstances are representative advantages of POC diagnosis. It would provide colorimetric results more conveniently, if the genetic analysis microsystem incorporates the ICS as a detector part. In this work, we develop a reverse transcriptase-polymerase chain reaction (RT-PCR) microfluidic device integrated with a ROSGENE strip for colorimetric influenza H1N1 virus detection. The integrated RT-PCR- ROSGENE device is consist of four functional units which are a pneumatic micropump for sample loading, 2 ${\mu}L$ volume RT-PCR chamber for target gene amplification, a resistance temperature detector (RTD) electrode for temperature control, and a ROSGENE strip for target gene detection. The device was fabricated by combining four layers: First wafer is for RTD microfabrication, the second wafer is for PCR chamber at the bottom and micropump channel on the top, the third is the monolithic PDMS, and the fourth is the manifold for micropump operation. The RT-PCR was performed with subtype specific forward and reverse primers which were labeled with Texas-red, serving as a fluorescent hapten. A biotin-dUTP was used to insert biotin moieties in the PCR amplicons, during the RT-PCR. The RT-PCR amplicons were loaded in the sample application area, and they were conjugated with Au NP-labeled hapten-antibody. The test band embedded with streptavidins captures the biotin labeled amplicons and we can see violet colorimetric signals if the target gene was amplified with the control line. The off-chip RT-PCR amplicons of the influenza H1N1 virus were analyzed with a ROSGENE strip in comparison with an agarose gel electrophoresis. The intensities of test line was proportional to the template quantity and the detection sensitivity of the strip was better than that of the agarose gel. The test band of the ROSGENE strip could be observed with only 10 copies of a RNA template by the naked eyes. For the on-chip RT-PCR-ROSGENE experiments, a RT-PCR cocktail was injected into the chamber from the inlet reservoir to the waste outlet by the micro-pump actuation. After filling without bubbles inside the chamber, a RT-PCR thermal cycling was executed for 2 hours with all the microvalves closed to isolate the PCR chamber. After thermal cycling, the RT-PCR product was delivered to the attached ROSGENE strip through the outlet reservoir. After dropping 40 ${\mu}L$ of an eluant buffer at the end of the strip, the violet test line was detected as a H1N1 virus indicator, while the negative experiment only revealed a control line and while the positive experiment a control and a test line was appeared.

• Pediatric Gastroenterology, Hepatology & Nutrition
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• 제20권3호
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• pp.198-203
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• 2017

Eosinophilic gastrointestinal disorder (EGID) is a rare disease in children that affects the bowel wall, with eosinophilic infiltration in the absence of any other causes for eosinophilia. The etiology remains unknown, but allergies and immunological imbalance are suspected triggers. We encountered a case of serosal EGID presenting as intractable vomiting and ascites in a 9-year-old girl, after influenza virus infection. Peripheral eosinophilia was not present. The diagnosis was confirmed by biopsy of the bowel wall through laparotomy and endoscopy, and controlled by 2 courses of steroid therapy due to recurring symptoms. Influenza virus infection was assumed to play a role in the onset of EGID through a Th2 response that stimulated eosinophilic infiltration in the GI tract. We therefore report this case along with a literature review.

• Clinical and Experimental Pediatrics
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• 제52권8호
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• pp.862-868
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• 2009

Since its identification in April 2009, a swine-origin H1N1 influenza A virus (S-OIV) which is a reassortment of gene segments from both North American triple-reassortant and Eurasian swine influenza has been widely spread among humans in unexpected rapidity. To date, each gene segment of the 2009 influenza A (H1N1) outbreak viruses have shown high (99.9%) neucleotide sequence identity. As of July 6, 94,512 people have been infected in 122 countries, of whom 429 have died with an overall case-fatality rate of <0.5%. Most confirmed cases of S-OIV infection have been characterized by self-limited, uncomplicated febrile respiratory illness and 38% of cases have also included vomiting or diarrhea. Standard plus droplet precautions should be adhered to at all times. Tests on S-OIV have indicated that current new H1N1 viruses are sensitive to neuraminidase inhibitors (oseltamivir). However, current less virulent S-OIV may evolve into a pathogenic strain or acquire antiviral resistance, potentially with more severe clinical consequences. Efforts to control these outbreaks would be based on our understanding of novel S-OIV and previous influenza pandemics.