• 제목/요약/키워드: Genetic Discrimination

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A Normative Review on Non-Invasive Prenatal Diagnosis (NIPD): Focusing on the German Discussion on PrenaTest®

  • Kim, Na-Kyoung
    • 한국발생생물학회지:발생과생식
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    • 제25권2호
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    • pp.113-121
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    • 2021
  • This article aims to introduce German discussion on the approval of the non-invasive prenatal diagnosis (NIPD), which started with the development of PrenaTest® by LifeCodexx AG. The discussion started with the concern that the non-invasive nature of NIPD, such as PrenaTest®, may rapidly expand the use and scope of similar tests, thus leading to a new era of eugenics. Based on this concern, the need for clear clinical guidelines on specific indications for NIPD has been suggested. Along the same line, it was discussed whether PrenaTest® is against the Basic Law prohibiting discrimination on grounds of disability and whether the test is outside the scope of the purpose of gene testing limited by Genetic Diagnosis Act. Through such discussion, the Federal Ministry of Health of Germany established the preconditions for inclusion of NIPD in the German public health insurance system. For this, the German motherhood guideline was amended and the information for the insured persons provided to pregnant women was included in the amended guideline. Such discussion made in Germany provides insight on which points should be considered when various gene testings are accepted in Korea, in which genetic communication has not been systematized yet. In particular, German counseling system for pregnant women will provide valuable insights for Korea where the direction for regulations on abortion has not been established even after the ruling by the Constitutional Court that charges for abortion are against the constitution.

Microsatellite Marker를 사용한 재래 닭 품종 유전적 특성 및 개체 식별력 분석 (Estimation of Genetic Characteristic and Cumulative Power of Discrimination using the Microsatellite Markers in Korean Native Chicken)

  • 이건우;오재돈;이진아;조규호;남인식;이준헌;서옥석;전광주;이학교;공홍식
    • 한국가금학회지
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    • 제37권1호
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    • pp.81-87
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    • 2010
  • 본 연구는 10종의 MS(microsatellite) Marker를 이용하여 한국 재래닭 품종 내 외모 특성에 의해 구분되는 3계통(적갈색: 60수, 황갈색: 46수, 흑색: 40수)과 오골계 집단(49수), 총 4계통(총 195수)에 대한 유전 특성을 분석하고, 이를 활용하여 동일성 검정을 실시할 경우 개체 식별에 대한 신뢰도를 검정하기 위해 실시하였다. 집단 간의 유전적 유연관계를 알아보기 위해 각 MS marker별 대립 유전자의 빈도를 산출하여 이를 근거로 집단간의 보정을 통한 방법을 이용하는 DISPAN program을 활용하여 유전적 거리에 대한 추정 결과 R(적갈색 계통)과 L(흑색 계통)간의 유전적 거리는 0.05로 가장 가까운 것으로 나타났으며, R과 Y(황갈색 계통, 0.073), Y과 L(0.083) 역시 가까운 유전적 거리를 나타내고 있음을 확인하였다. 반면, 재래닭 집단과 오골계 집단(S) 간의 유전적 거리는 0.149(R과 S), 0.144(Y과 S) 그리고 0.158(L과 S)으로 비교적 먼 것으로 나타나 재래닭 집단과 오골계 집단 간의 유전적 차별성을 확인할 수 있었다. 10종의 MS marker를 대상으로 누적 개체 식별력을 계산한 결과 99.999%로 확인되었고 $0.255{\times}10^{-7}$의 짝확률 값이 추정되었다.

RAPD마커를 이용한 황기의 유전적 다양성 및 기원판별 (Genetic Diversity and Discrimination of Astragalus Membranaceus Bunge and A. Membranaceus var. Mogholicus Using RAPD Markers)

  • 방경환;허만규;조준형
    • 동의생리병리학회지
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    • 제18권3호
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    • pp.825-829
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    • 2004
  • This study was carried out to differentiate the origins of Astragalus membranaceus Bunge and A. membranaceus Bunge var. mogholicus Nakai. To identify the variation of the RAPD patterns between domestic and foreign Astragalus species, 40 random primers were applied to ten accessions of A. membranaceus and six accessions of A. membranaceus var. mogholicus genomic DNA, respectively, Ten primers of 40 primers could be used to discriminate the origins and 33 polymorph isms among 44 scored DNA fragments (33 fragments are specific for A. membranaceus and A. membranaceus var. mogholicus) were generated using these primers, 75.0 % of which were polymorphic. Especially, three primers of ten primers, OPA17, OPA11 and OPB11, were useful to differentiate between domestic and foreign Astragalus species. RAPD data from the 10 primers were used for cluster analysis and cluster analysis of RAPD markers showed that the two groups are distinct genetically. Consequently, RAPD analysis was a useful method to discriminate between A. membranaceus and A. membranaceus var. mogholicus.

신용평가를 위한 데이터마이닝 분류모형의 통합모형에 관한 연구 (A Study of the Integration of Individual Classification Model in Data Mining for the Credit Evaluation)

  • 김갑식
    • 정보처리학회논문지D
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    • 제12D권2호
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    • pp.211-218
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    • 2005
  • 본 연구는 금융기관에서의 고객신용평가를 위한 최적의 데이터마이닝 모형을 제안한다. 이를 위해 할부금융시장에서의 고객정보 및 할부진행 과정에 대한 세부 내역을 바탕으로 다계층 퍼셉트론(Multi-Layered Perceptrons:MLP)과 다변량 판별분석(Multivariate Discrimination Analysis : MDA), 그리고 의사결정나무(Decision Tree)를 적용하여 각각의 개별모형을 도출하고 이론 유전자 알고리즘을 이용하여 통합한 최종 모형을 구해 그 결과론 각 단일모형과 비교${\cdot}$분석하였다. 그 견과 유전자 알고리즘을 통해 결합한 통합모형의 성능이 가장 우수한 것으로 나타났다. 이에 본 연구는 기존에 진행되었던 개변모형에 대한 검증은 물론, 단순히 여러 개의 모형을 비교${\cdot}$분석하여 우월한 모형을 평가하는 기존 방법론 상의 한계를 극복하기 위해 각각의 개별모형을 유전자 알고리즘을 통해 통합모형으로 구축하는 하나의 방법론을 제시하였다는데 그 의의가 있다.

RAPD마커를 이용한 가시오갈피의 기원판별 및 유전적 다양성 (Discrimination and Genetic Diversity of Acanthopanax senticosus Using RAPD Markers)

  • 허만규;최영현;최병태;김경철
    • 동의생리병리학회지
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    • 제19권4호
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    • pp.1046-1049
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    • 2005
  • Acanthopanx senticosus (Araliaceae) is a long-lived woody species primarily distributed throughout East Asia. This species is regarded as medically and ecologically important woody plants in Korea. To identify the variation of the RAPD patterns between domestic and foreign A. senticosus species, 22 random primers were applied to Korean A. senticosus and A. senticosus for. inermis, Chinese and Russian A. senticosus. Six primers of them could be used to discriminate the origins and 58 polymorphisms among 92 scored DNA fragments. Six bands are specific for Korean A. senticosus and A. senticosus for. inermis. Especially, three primers, OPD04, OPD11 and OPE10, were useful to differentiate between domestic and foreign Acanthopanax species. RAPD analysis was a useful method to discriminate among A. senticosus populations or accessions and Korean accessions are distinct genetically.

목단피의 감별을 위한 ITS-PCR 분석 (ITS-PCR Analysis for the Discrimination of Moutan Cortex)

  • 이재웅;김영화;고병섭;육진아;오승은;박상언;이미영
    • 한국약용작물학회지
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    • 제18권1호
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    • pp.40-45
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    • 2010
  • The application of PCR analysis on the herbal medicine Moutan Cortex (Paeonia suffruticosa Andrews) was evaluated by the comparison of the genetic relationship based on the DNA sequence with Paeoniae Radix (Paeonia lactiflora Pallas) following development of specific primers. Moutan Cortex and Paeoniae Radix were distinguished through the PCR analysis based on the internal transcribed spacer (ITS-PCR) from nuclear ribosomal DNA region. The 294 bp PCR products both of Moutan Cortex and Paeoniae Radix was amplified by MIF1 and MIR1. And a Moutan Cortex specific 225 bp PCR amplification product was amplified by MIF2 and MIR1 primers. The 225 bp sequence could be successfully amplified from Mortan Cortex of dried herbal preparations. PCR analysis based on ITS (ITS-PCR) may be an efficient tool for the discrimination of Moutan Cortex.

Development of HRM Markers for Discrimination of Pyogo (Lentinula edodes) Cultivars Sanjo 701 and Chamaram

  • Suyun Moon;Hojin Ryu
    • 한국균학회지
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    • 제50권3호
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    • pp.225-233
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    • 2022
  • Pyogo (Shiitake, Lentinula edodes) is one of the most important edible mushrooms because of its outstanding nutritive and medicinal value. In the registration and protection procedure for newly developed mushroom cultivars, the application of molecular markers that can supplement the morphological characteristic-based distinction has been strongly requested. Sanjo 701 and Chamaram, newly developed at the Federation Forest Mushroom Research Center of Korea, have been characterized as innovative cultivars suitable for customer demands because of their high yields and cultivation rates. However, no technical tools can protect the rights to these important cultivars. In this study, using comparative genomic information from 23 commercially available pyogo cultivars, we identified single nucleotide polymorphisms (SNPs) that accurately differentiated Sanjo701 and Chamaram from the other cultivars. We also developed high-resolution melting analysis (HRM)-based SNP markers that discriminate among the tested 23 pyogo cultivars. The developed SNP markers can be utilized for rapid, accurate identification of pyogo cultivars with low genetic diversity and to prevent cultivar contamination caused by illegally distributed inocula. In addition, these markers can serve as a crucial scientific basis for securing the right to conserve new cultivars in international markets.

초위성체를 이용한 한국 재래닭의 원산지 추적 및 개체 식별 방법에 관한 연구 (Method Discrimination for Product Traceability and Identification of Korean Native Chicken using Microsatellite DNA)

  • 박미현;오재돈;전광주;공홍식;상병돈;최철환;연성흠;조병욱;이학교
    • 한국유기농업학회지
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    • 제12권4호
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    • pp.451-461
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    • 2004
  • In an animals, identification system has been widely used by ear tag with dummy code and blood typing for parernity. Also, genotyping methods were using for useful mean of individual identification for live animals. In the case of genotyping estimation of gene in population of korean native chicken. In this study, we tested for development of genetic markers used it possible to determination of individual identification system. The candidate genetic markers were used already bow 10 of microstalite DNA sequence information in chromosome No. 1 and 14. Result of analysis for genotyping, the number of alleles of those microstatelites DNA was shown minimal 3 to 12 and the heterozygote expression frequency range was shown from 0.617 to 0.862. In our result, effective number of allele for each microsatellites DNA was shown 3~7, and the accuracy of individual identification was shown nearly 100%, when used with 6 genetic marker. This study was about genotyping method for identification used specific genetic marker form microsatellite DNA in the brand marketing of korean native chicken. Our results suggest that genotyping method used specific genetic marker from microsatellite DNA might be very useful for determination of individual identification.

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유전자 분석 기반 수입산 형태 변이 반하 유통 사례 보고 (A Case Report of Imports Morphological Variation of Pinelliae Tuber Based on the Genetic Analysis)

  • 김욱진;최고야;노수민;문병철
    • 대한본초학회지
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    • 제37권5호
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    • pp.9-16
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    • 2022
  • Objectives : The purpose of this study is to report that applying the genetic discrimination method to Pinelliae Tuber is suitable as a countermeasure for the limitations of morphological identification announced publicly in the Ministry of Food and Drug Safety(MFDS). Methods : Randomly selected fifty samples in Pinelliae Tuber imported from China were used for morphological and genetic identification. The morphological identification was applied method announced publicly by the MFDS. The traits of morphological identification were classified as Pinellia ternata, P. tripartita, Pinellia pedatisecta, and Typhonium flagelliforme, according to the formation of tuberous root and tuber morphology. The genetic identifications were conducted by Sequence Characterized Amplified Region(SCAR) marker and DNA barcoding analysis for cross-validation, respectively. SCAR marker was verified according to the presence or absence of amplicon through PCR amplification using species-specific primers. DNA barcoding analysis used sequence information of the matK region. Results : As a result of the morphological identification, 27 out of 50 samples were identified as original species 'P. ternata' of genuine 'Pinelliae Tuber', and 23 were identified as adulterant species 'P. pedatisecta'. Unlike this, the genetic identification was identified as the original species 'P. ternata' in all 50 samples in the SCAR marker and matK regional sequence analysis. Conclusions : Pinelliae Tuber of morphological mutant that can not be classified by morphological identification is imported from China. The SCAR marker would be used as accurate and efficient assays for species identification of the morphological mutant.

Estimation of the Cumulative Power of Discrimination in Haimen Chicken Populations with Ten Microsatellite Markers

  • Olowofeso, O.;Wang, J.Y.;Shen, J.C.;Chen, K.W.;Sheng, H.W.;Zhang, P.;Wu, R.
    • Asian-Australasian Journal of Animal Sciences
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    • 제18권8호
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    • pp.1066-1070
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    • 2005
  • To estimate the cumulative power of discrimination (CPD) existing within Haimen chicken populations in China, we isolated a total of 252 genomic DNAs from four chicken populations (Rugao, Jiangchun, Wan-Nan and Cshiqishi) through a saturated salt procedure. All the genomic DNAs were used in a polymerase chain reaction (PCR) with ten microsatellite markers. Amplified PCR-products with the selected markers were separated on a 12% polyacrylamide gel with pBR322DNA/MspI used as internal standard marker. Genetic diversity indices including mean allele number among loci, unbiased heterozygosity ($h_i$) within locus, effective number of alleles ($N_e$) and polymorphism information content (PIC) as well as the unbiased average heterozygosity (H) among loci in the populations were calculated using the generated allele frequencies by each marker. The mean allele number for all loci ranged between 4.00${\pm}$0.33 (Rugao) to 4.90${\pm}$0.48 (Cshiqishi) and across populations for all loci was 4.60${\pm}$0.20, while (H) ranged from 0.65${\pm}$0.03 (Rugao) to 0.69${\pm}$0.03 (Jiangchun) among loci and across populations, (H) was 0.67${\pm}$0.01. The generated unbiased average heterozygosity among loci in each population was integrated to the global formula of CPD and the result demonstrated that the CPD within the four Haimen chicken populations was 98.75%.