• The Journal of Korean Institute of Communications and Information Sciences
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• v.38A no.8
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• pp.650-655
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• 2013

For the DC-free encoding of source data, the Guided Scrambling (GS) technique is widely used as multi-mode coding in the optical data storage system. For DC-suppression GS coding in the holographic data storage system, the conservative array and balanced coding criteria are proposed. In this paper, equivalent integer programming models are developed to determine the optimal control bits for the minimum digital sum value (MDSV), conservative array, and balanced coding criteria. Using the proposed integer programming models, we compare the performance of GS encoding for the various combination of control bit/array sizes and scrambling polynomials.

• The Journal of Korean Institute of Communications and Information Sciences
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• v.38A no.8
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• pp.644-649
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• 2013

For effective DC-free coding in the optical storage systems, the Guided Scrambling algorithm is widely used. To reduce digital discrepancy of the coded sequence, functions of digital sum value (DSV) are used as criteria to choose the best candidate. Among these criteria, the minimum digital sum value (MDSV), minium squared weight (MSW), and minimum threshold overrun (MTO) are popular methods for effective DC-suppression. In this paper, we formulate integer programming models that are equivalent to MDSV, MSW, and MTO GS coding. Incorporating the MDSV integer programming model in MaxMin setting, we develop an integer programming model that computes the worst case MDSV bound given scrambling polynomial and control bit size. In the simulation, we compared the worst case MDSV bound for different scrambling polynomial and control bit sizes. We find that careful selection of scrambling polynomial and control bit size are important factor to guarantee the worst case MDSV performance.

• The Journal of Korean Institute of Communications and Information Sciences
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• v.31 no.2A
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• pp.187-193
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• 2006

Multicarrier systems has major shortcomings due to the large numbers of subcarrier. One of the shortcomings is the high peak-to-average power ratio(PAPR), which causes nonlinearity distortion in the transmitter, and degrades the performance of the system significantly. Partial transmit sequence(PTS) is one of the best approaches that can significantly improve the statistics of the PAPR of an orthogonal frequency division multiplexing(OFDM) signal. Guided scrambling(GS) is an extension of self-synchronizing scrambling. It is also capable of guiding the scrambling process to produce a balanced encoded bit stream. In this paper, we propose a sub-optimal algorithm to optimize the phase factor in PTS. In addition, we integrate GS coding with this method. The proposed Hybrid algorithm can get much more PAPR reduction at the expense of incur a few error extension and do not require transmission of side information.

• BMB Reports
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• v.36 no.3
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• pp.326-331
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• 2003

The fission yeast cells that contained the cloned glutathione synthetase (GS) gene showed 1.4-fold higher glutathione (GSB) content and 1.9-fold higher GS activity than the cells without the cloned GS gene. Interestingly, $\gamma$-glutamylcysteine synthetase activity increased 2.1-fold in the S. pombe cells that contained the cloned GS gene. The S. pombe cells that harbored the multi copy-number plasmid pRGS49 (containing the cloned GS gene) showed a higher level of survival on solid media with cadmium chloride (1 mM) or mercuric chloride ($10\;{\mu}M$) than the cells that harbored the YEp357R vector. The 506 bp upstream sequence from the translational initiation point and N-terminal8 amino acid-coding region were fused into the promoteriess $\beta$-galactosidase gene of the shuttle vector YEp367R to generate the fusion plasmid pUGS39. Synthesis of $\beta$-galactosidase from the fusion plasmid pUGS39 was significantly enhanced by cadmium chloride and NO-generating S-nitroso-N-acetylpenicillamine (SNAP) and sodium nitroprusside (SN). It was also induced by L-buthionine-(S,R)-sulfoximine, a specific inhibitor of $\gamma$-glutamylcysteine synthetase (GCS). We also found that the expression of the S. pombe GS gene is regulated by the Atf1-Spc1-Wis1 signal pathway.

• The Journal of Korean Institute of Communications and Information Sciences
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• v.31 no.7C
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• pp.680-690
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• 2006

In this paper, we present a bit allocation scheme based on grouped sub-channels for MIMO-OFDM (Multiple Input Multiple Output-Orthogonal Frequency Division Multiplexing) systems using V-BLAST (Vertical-Bell laboratories LAyered Space-Time) detector. A fully adaptive modulation and coding scheme may provide optimal performance in the MIMO-OFDM systems, however it requires excessive feedback information. Instead, SBA (Simplified Bit Allocation) scheme for reduction of feedback overhead, which applies the same modulation and coding to all the good sub-channels, may be considered. The proposed scheme in this paper named SBA-GS (Simplified Bit Allocation based on Grouped Sub-channels) groups sub-channels and assigns the same modulation and coding to the set of selected sub-channel groups. Simulation results show that the proposed scheme achieves comparable bit error rate performance of the conventional SBA scheme, while significantly reducing the feedback overhead in multipath channels with small delay spreads.

• The Journal of Korean Institute of Communications and Information Sciences
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• v.29 no.8C
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• pp.1034-1039
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• 2004

Since the major reason of the detection failure is from the consecutive data transitions, it is desirable to limit the MTR(maximum transition run) within two. Therefore, we propose a new MTR code that limits the MTR constraint to 2 and k-constraint to 8. In addition, DC-free coding is performed to overcome the media noise that exits in low frequency of perpendicular recording system. We use a GS (Guided Scrambling) for DC-free coding, and the performance of the code is compared with that of the rate 819 code used in the conventional recording channel by a computer simulation.

• JSTS:Journal of Semiconductor Technology and Science
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• v.13 no.5
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• pp.473-481
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• 2013

A fractional folding analog-to-digital converter (ADC) with a novel arithmetic digital encoding technique is discussed. In order to reduce the asymmetry errors of the boundary conditions for the conventional folding ADC, a structure using an odd number of folding blocks and fractional folding rate is proposed. To implement the fractional technique, a new arithmetic digital encoding technique composed of a memory and an adder is described. Further, the coding errors generated by device mismatching and other external factors are minimized, since an iterating offset self-calibration technique is adopted with a digital error correction logic. A prototype 8-bit 1GS/s ADC has been fabricated using an 1.2V 0.13 um 1-poly 6-metal CMOS process. The effective chip area is $2.1mm^2$(ADC core : $1.4mm^2$, calibration engine : $0.7mm^2$), and the power consumption is 88 mW. The measured SNDR is 46.22 dB at the conversion rate of 1 GS/s. Both values of INL and DNL are within 1 LSB.

• Journal of Microbiology and Biotechnology
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• v.23 no.4
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• pp.459-466
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• 2013

The lactic acid bacterium Streptococcus thermophilus is widely used as a starter culture for the production of dairy products. Whole-genome sequencing is expected to utilize the genetic basis behind the metabolic functioning of lactic acid bacterium (LAB), for development of their use in biotechnological and probiotic applications. We sequenced the whole genome of Streptococcus thermophilus MTCC 5461, the strain isolated from a curd source, by 454 GS-FLX titanium and Ion Torrent PGM. We performed comparative genome analysis using the local BLAST and RDP for 16S rDNA comparison and by the RAST server for functional comparison against the published genome sequence of Streptococcus thermophilus CNRZ 1066. The whole genome size of S. thermophilus MTCC 5461 is of 1.73Mb size with a GC content of 39.3%. Streptococcal virulence-related genes are either inactivated or absent in the strain. The genome possesses coding sequences for features important for a probiotic organism such as adhesion, acid tolerance, bacteriocin production, and lactose utilization, which was found to be conserved among the strains MTCC 5461 and CNRZ 1066. Biochemical analysis revealed the utilization of 17 sugars by the bacterium, where the presence of genes encoding enzymes involved in metabolism for 16 of these 17 sugars were confirmed in the genome. This study supports the facts that the strain MTCC 5461 is nonpathogenic and harbors essential features that can be exploited for its probiotic potential.

• Journal of Food Hygiene and Safety
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• v.27 no.2
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• pp.194-201
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• 2012

Facing a number of global food-related accidents, the concept and system for food traceability have been designed and introduced in many countries to manage the food-safety risks. To connect and harmonize the various food traceability-information in food traceability system according to the food supply chain, the coding system of identification-number for food-traceability has to be standardized. The GTIN (Global Trade Item Number) barcode system which has been globally standardized and implemented, is reviewed with the mandatory food-labeling regulation in expiration date of processed foods. The integration of GTIN-13 bar-code system for food-traceability is a crucial factor to expand its function in the food-related industrial areas. In this literature, the standard coding system of identification-number for food-traceability is proposed with 20 digit coding number which is combined with GTIN-13 bar-code (13 digit), expiration date (6 digit), and additional classification code (1 digit). This proposed standard coding system for identification-number has a several advantages in application for prohibiting the sale of hazard goods, food-recall, and inquiring food traceability-information. And also, this proposed coding system could enhance the food traceability system by communicating and harmonizing the information with the national network such as UNI-PASS and electronic Tax-invoice system. For the global application, the identification-number for food-traceability needs to be cooperated with the upcoming global standards such as GTIN-128 bar-code and GS1 DataBar.

• Molecules and Cells
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• v.19 no.1
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• pp.67-73
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• 2005

Isoflavones are synthesized by isoflavone synthases via the phenylpropanoid pathway in legumes. We have cloned two isoflavone synthase genes, IFS1 and IFS2, from a total of 18 soybean cultivars. The amino acid residues of the proteins that differed between cultivars were dispersed over the entire coding region. However, amino acid sequence variation did not occur in conserved domains such as the ERR triad region, except that one conserved amino acid was changed in the IFS2 protein of the GS12 cultivar ($R_{374}G$) and the IFS1 proteins of the 99M06 and Soja99s65 cultivars ($A_{109}T$, $F_{105}I$). In three cultivars (99M06, 99M116, and Simheukpi), most of amino acid changes were such that the difference between the amino acid sequences of IFS1 and IFS2 was reduced. The expression profiles of three enzymes that convert naringenin to the isoflavone, genistein, chalcone isomerase (CHI), isoflavone synthase (IFS) and flavanone 3-hydroxylase (F3H) were examined. In general, IFS mRNA was more abundant in etiolated seedlings than mature plants whereas the levels of CHI and F3H mRNAs were similar in the two stages. During seed development, IFS was expressed a little later than CHI and F3H but expression of these three genes was barely detectable, if at all, during later seed hardening. In addition, we found that the levels of CHI, F3H, and IFS mRNAs were under circadian control. We also showed that IFS was induced by wounding and by application of methyl jasmonate to etiolated soybean seedlings.