• 제목/요약/키워드: Downstream Processes

검색결과 167건 처리시간 0.033초

The Construction of Regulatory Network for Insulin-Mediated Genes by Integrating Methods Based on Transcription Factor Binding Motifs and Gene Expression Variations

  • Jung, Hyeim;Han, Seonggyun;Kim, Sangsoo
    • Genomics & Informatics
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    • 제13권3호
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    • pp.76-80
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    • 2015
  • Type 2 diabetes mellitus is a complex metabolic disorder associated with multiple genetic, developmental and environmental factors. The recent advances in gene expression microarray technologies as well as network-based analysis methodologies provide groundbreaking opportunities to study type 2 diabetes mellitus. In the present study, we used previously published gene expression microarray datasets of human skeletal muscle samples collected from 20 insulin sensitive individuals before and after insulin treatment in order to construct insulin-mediated regulatory network. Based on a motif discovery method implemented by iRegulon, a Cytoscape app, we identified 25 candidate regulons, motifs of which were enriched among the promoters of 478 up-regulated genes and 82 down-regulated genes. We then looked for a hierarchical network of the candidate regulators, in such a way that the conditional combination of their expression changes may explain those of their target genes. Using Genomica, a software tool for regulatory network construction, we obtained a hierarchical network of eight regulons that were used to map insulin downstream signaling network. Taken together, the results illustrate the benefits of combining completely different methods such as motif-based regulatory factor discovery and expression level-based construction of regulatory network of their target genes in understanding insulin induced biological processes and signaling pathways.

실시간 제어기를 이용한 마이크로 열식 질량공기 유량센서의 열특성 측정 (Measurements of Thermal Characteristics for a Micro-Fabricated Thermal Mass Air Flow Sensor With Real-Time Controller)

  • 박병규;이준식
    • 대한기계학회논문집B
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    • 제33권8호
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    • pp.573-579
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    • 2009
  • A thermal mass air flow sensor, which consists of a micro-heater and thermal sensors on the silicon-nitride thin membrane structure, is micro-fabricated by MEMS processes. Three thermo-resistive sensors, one for the measurement of microheater temperature, the others for the measurement of membrane temperature upstream and downstream of the micro-heater respectively, are used. The micro-heater is operated under the constant temperature difference mode via a real time controller, based on inlet air temperature. Two design models for microfabricated flow sensor are compared with experimental results and confirmed their applicabilities and limitations. The thermal characteristics are measured to find the best flow indicator. It is found that two normalized temperature indicators can be adopted with some advantages in practice. The flow sensor with this control mode can be adopted for wide capability of high speed and sensitivity in the very low and medium velocity ranges.

꾸지뽕나무 추출물의 비만세포 억제에 의한 항알레르기 효과 및 기전 (Cudrania tricuspidata Suppresses Mast Cell-Mediated Allergic Response In Vitro and In Vivo)

  • 김영미
    • 약학회지
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    • 제56권1호
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    • pp.26-34
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    • 2012
  • Mast cells play an important role in early and late phase allergic reactions through allergen and IgE-dependent release of histamine, proteases, prostaglandins, and several multifunctional cytokines. In this study, we investigated whether Cudrania tricuspidata extract (CTE) suppresses IgE-mediated allergic responses in mast cells, an allergic animal model, and its mechanism of action in mast cells. We found that CTE inhibited IgE-mediated degranulation and cytokine production in rat basophilic leukemia (RBL)-2H3 mast cells and bone marrow-derived mast cells (BMMC), as well as passive cutaneous anaphylaxis (PCA) in mice. With regard to its mechanism of action, CTE suppressed the activating phosphorylation of spleen tyrosine kinase (Syk), a key enzyme in mast cell signaling processes and that of LAT, a downstream adaptor molecule of Syk in $Fc{\varepsilon}RI$-mediated signal pathways. CTE also suppressed the activating phosphorylation of mitogen-activated protein (MAP) kinases and Akt. The present results strongly suggest that the anti-allergic activity of CTE is mediated through inhibiting degranulation and allergic cytokine secretion by inhibition of Syk kinase in mast cells. Therefore, CTE may be useful for the treatment of allergic diseases.

3차원 CAD에서 STEP Part111을 통한 AP224 특징형상 데이터 번역 (AP224 based Feature Translation from 3D CAD through STEP Part111)

  • 김준환
    • 한국CDE학회논문집
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    • 제11권4호
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    • pp.303-314
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    • 2006
  • The exchange of CAD (Computer Aided Design) models between different CAD systems and to downstream applications such as manufacturing has become very important to modem industry. One serious current issue is that the process cannot automatically import existing 3-D solid models in a variety of commercial CAD formats into the process without manually re-mastering the model in current standard including "SIEP AP(Application Protocol) 203 Edition 1" To fully integrate technical data from the design agency to the shop floor, design intent and validated 3D geometry of feature based parametric CAD model should be brought into the standardized processes. To overcome this limitation, AP203 Edition 2 (Ed.2) and its related STEP parts such as Part55, Part108, Part109, Part111 and Part112 are starting to be available to handle this problem. The features in Part111 are harmonized with the machining features available in AP224. This paper is focused on two mapping technologies: CAD to Part111 mapping and Pat111 to AP224 mapping including case studios and it will provide the guideline about what should be done next in the AP203 Ed.2 to AP224 mapping. The final goal of this project is to integrate technical data from CAD to AP224 based manufacturing information through AP203 Ed.2.

테트라포드 사방댐의 적용성 평가 -산청군 홍계리 지역을 대상으로- (Applicability Evaluation of Tetrapod Debris Barrier -A Case of Honggyeri Area in Sanchung County-)

  • 김기흥;박재현;마호섭
    • 한국환경복원기술학회지
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    • 제15권1호
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    • pp.119-132
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    • 2012
  • In order to connect eco-corridor and to harmonize with natural environment, it is necessary to construct small debris barrier. Therefore, we will evaluate applicability of small debris barrier which made of tetrapod utilized in construction of seashore protection facilities and breakwater. From result compared with the adaptation processes in fields, tetrapod were stabilized to critical tractive force. Stability evaluation method on sliding and overturn of tetrapod debris barrier was developed, and hereafter could be applied to similar debris barriers. According to results analyzed to continuity on sediment supply in debris barrier, boulders were deposited in upstream and gravels were deposited in downstream. Therefore, tetrapod debris barrier will be able to prevent in the long-term the erosion of river bed in down-stream, and the maintenance is easy because dredging is not necessary. Current were formed in between the tetrapod provided eco-corridors for fishes and shellfishes.

QUAL II 모형의 금강수계에의 적용 (An Application of the QUAL II Model to the Keum River System)

  • 최흥식;이길성
    • 한국수자원학회:학술대회논문집
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    • 한국수자원학회 1987년도 제29회 수공학연구발표회논문초록집
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    • pp.159-168
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    • 1987
  • 하용에서 수질 시뮬레이숀에 의한 시간적, 공간적 수질예측은 하용 수질관리를 위한 계획수립, 설계 및 모형의 최적화에 필요한 자료를 제공해 준다. 본 연구는 대청댐 하류에서 부여백제대교에 이르는 금강수계에서의 QUAL II 모형의 적용에 관한 것이다. QUAL II모형에서 사용된 물질수지방정식에 근거를 둔 대류-분석모형과 그 수치해석법을 제시하였다. 하용을 따르는 BOD, DO 및 수온의시뮬레이숀괍과 실측값과의 비교분석을 통한 모형의 활용성 제고에 역점을 두었다. 이러한 과정을 통해 금강에서의 하용수질을 평가하고, 탈산소 계수, 재폭기 계수 및 자정계수의 값을 추정하였다. 또한 대청댐 방류량 조절에 의한 목표하는 DO의 유지에 대하여 논의하였다.

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Regulatory Role of Zinc in Immune Cell Signaling

  • Kim, Bonah;Lee, Won-Woo
    • Molecules and Cells
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    • 제44권5호
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    • pp.335-341
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    • 2021
  • Zinc is an essential micronutrient with crucial roles in multiple facets of biological processes. Dysregulated zinc homeostasis impairs overall immune function and resultantly increases susceptibility to infection. Clinically, zinc supplementation is practiced for treatment of several infectious diseases, such as diarrhea and malaria. Recent focus on zinc as a beneficial element for immune system support has resulted in investigation of the immunomodulatory roles of zinc in a variety of immune cells. Besides its classical role as a cofactor that regulates the structural function of thousands of proteins, accumulating evidence suggests that zinc also acts, in a manner similar to calcium, as an ionic regulator of immune responses via participation as an intracellular messenger in signaling pathways. In this review, we focus on the role of zinc as a signaling molecule in major pathways such as those downstream of Toll-like receptors-, T cell receptor-, and cytokine-mediated signal transduction that regulate the activity and function of monocytes/macrophages and T cells, principal players in the innate and adaptive immune systems.

Isolation of Multi-Abiotic Stress Response Genes to Generate Global Warming Defense Forage Crops

  • Ermawati, Netty;Hong, Jong Chan;Son, Daeyoung;Cha, Joon-Yung
    • 한국초지조사료학회지
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    • 제41권4호
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    • pp.242-249
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    • 2021
  • Forage crop management is severely challenged by global warming-induced climate changes representing diverse a/biotic stresses. Thus, screening of valuable genetic resources would be applied to develop stress-tolerant forage crops. We isolated two NAC (NAM, ATAF1, ATAF2, CUC2) transcription factors (ANAC032 and ANAC083) transcriptionally activated by multi-abiotic stresses (salt, drought, and cold stresses) from Arabidopsis by microarray analysis. The NAC family is one of the most prominent transcription factor families in plants and functions in various biological processes. The enhanced expressions of two ANACs by multi-abiotic stresses were validated by quantitative RT-PCR analysis. We also confirmed that both ANACs were localized in the nucleus, suggesting that ANAC032 and ANAC083 act as transcription factors to regulate the expression of downstream target genes. Promoter activities of ANAC032 and ANAC083 through histochemical GUS staining again suggested that various abiotic stresses strongly drive both ANACs expressions. Our data suggest that ANAC032 and ANAC083 would be valuable genetic candidates for breeding multi-abiotic stress-tolerant forage crops via the genetic modification of a single gene.

The Pleiotropic Face of CREB Family Transcription Factors

  • Md. Arifur Rahman Chowdhury;Jungeun An;Sangyun Jeong
    • Molecules and Cells
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    • 제46권7호
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    • pp.399-413
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    • 2023
  • cAMP responsive element-binding protein (CREB) is one of the most intensively studied phosphorylation-dependent transcription factors that provide evolutionarily conserved mechanisms of differential gene expression in vertebrates and invertebrates. Many cellular protein kinases that function downstream of distinct cell surface receptors are responsible for the activation of CREB. Upon functional dimerization of the activated CREB to cis-acting cAMP responsive elements within the promoters of target genes, it facilitates signal-dependent gene expression. From the discovery of CREB, which is ubiquitously expressed, it has been proven to be involved in a variety of cellular processes that include cell proliferation, adaptation, survival, differentiation, and physiology, through the control of target gene expression. In this review, we highlight the essential roles of CREB proteins in the nervous system, the immune system, cancer development, hepatic physiology, and cardiovascular function and further discuss a wide range of CREB-associated diseases and molecular mechanisms underlying the pathogenesis of these diseases.

멤브레인 크로마토그래피에 의한 바이러스 정제 : 리뷰 (Virus Purification by Membrane Chromatography: A Review)

  • 가야트리 바미디파티;라즈쿠마 파텔
    • 멤브레인
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    • 제34권2호
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    • pp.124-131
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    • 2024
  • 바이러스는 생물 의약 산업에서 다양한 응용 분야를 가지고 있다. 그들은 살충제 생산, 백신 생산, 유전자 전달, 암 치료제 등에 사용된다. 바이러스의 하류 처리는 그들의 생물학적 및 의약적 응용을 위한 필수 단계이다. 다양한 과정 중에서 바이러스의 정제는 매우 중요하다. 막 크로마토그래피는 이 과정에서 중요한 역할을 한다. 이온 교환 막 크로마토그래피는 주로 사용되는 방법이지만 크기 배제 및 불충분한 정제에 관한 다양한 제한을 가지고 있다. 또한, 이는 인플루엔자와 같은 빠르게 변화하는 바이러스의 균주에 적용될 수 없다. 이 검토는 막 크로마토그래피의 다양한 개선된 방법 또는 대안을 검토한다. 이는 정제, 바이러스 회수율 및 방법의 확장성에 초점을 맞추고 있다.