• Title/Summary/Keyword: Data Traits

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Comparative genetic analysis of frequentist and Bayesian approach for reproduction, production and life time traits showing favourable association of age at first calving in Tharparkar cattle

  • Nistha Yadav;Sabyasachi Mukherjee;Anupama Mukherjee
    • Animal Bioscience
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    • v.36 no.12
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    • pp.1806-1820
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    • 2023
  • Objective: The present study was aimed primarily for estimating various genetic parameters (heritability, genetic correlations) of reproduction (age at first calving [AFC], first service period [FSP]); production (first lactation milk, solid-not fat, and fat yield) and lifetime traits (lifetime milk yield, productive life [PL], herd life [HL]) in Tharparkar cattle to check the association of reproduction traits with lifetime traits through two different methods (Frequentist and Bayesian) for comparative purpose. Methods: Animal breeding data of Tharparkar cattle (n = 964) collected from Livestock farm unit of ICAR-NDRI Karnal for the period 1990 through 2019 were analyzed using a Frequentist least squares maximum likelihood method (LSML; Harvey, 1990) and a multi-trait Bayesian-Gibbs sampler approach (MTGSAM) for genetic correlations estimation of all the traits. Estimated breeding values of sires was obtained by BLUP and Bayesian analysis for the production traits. Results: Heritability estimates of most of the traits were medium to high with the LSML (0.20±0.44 to 0.49±0.71) and Bayesian approach (0.24±0.009 to 0.61±0.017), respectively. However, more reliable estimates were obtained using the Bayesian technique. A higher heritability estimate was obtained for AFC (0.61±0.017) followed by first lactation fat yield, first lactation solid-not fat yield, FSP, first lactation milk yield (FLMY), PL (0.60±0.013, 0.60±0.006, 0.57±0.024, 0.57±0.020, 0.42±0.025); while a lower estimate for HL (0.38±0.034) by MTGSAM approach. Genetic and phenotypic correlations were negative for AFC-PL, AFC-HL, FSP-PL, and FSP-HL (-0.59±0.19, -0.59±0.24, -0.38±0.101 and -0.34±0.076) by the multi-trait Bayesian analysis. Conclusion: Breed and traits of economic importance are important for selection decisions to ensure genetic gain in cattle breeding programs. Favourable genetic and phenotypic correlations of AFC with production and lifetime traits compared to that of FSP indicated better scope of AFC for indirect selection of life-time traits at an early age. This also indicated that the present Tharparkar cattle herd had sufficient genetic diversity through the selection of AFC for the improvement of first lactation production and lifetime traits.

Efficacy of Auxiliary Traits in Estimation of Breeding Value of Sires for Milk Production

  • Sahana, G.;Gurnani, M.
    • Asian-Australasian Journal of Animal Sciences
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    • v.12 no.4
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    • pp.511-514
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    • 1999
  • Data pertaining to 1111 first lactation performance record of Karan Fries (Holstein-Friesian $\times$ Zebu) cows spread over a period of 21 years and sired by 72 bulls were used to examine the efficiency of sire indices for lactation milk production using auxiliary traits. First lactation length, first service period, first calving interval, first dry period and age at first calving were considered as auxiliary traits. The efficiency of this method was compared with simple daughter average index (D), contemporary comparison method (CC), least-square method (LSQ), simplified regressed least-squares method (SRLS) and best linear unbiased prediction (BLUP) for lactation milk production. The relative efficiency of sire evaluation methods using one auxiliary trait was lower (24.2-32.8%) in comparison to CC method, the most efficient method observed in this study. Use of two auxiliary traits at a time did not further improve the efficiency. The auxiliary sire indices discriminate better among bulls as the range of breeding values were higher in these methods in comparison to conventional sire evaluation methods. The rank correlation between breeding values estimated using auxiliary traits were high (0.77-0.78) with CC method. The rank correlation among auxiliary sire indices ranged from 0.98 to 0.99, indicating similar ranking of sire for breeding values of milk production in all the auxiliary sire indices.

Phenotypic Factor Analysis for Linear Type Traits in Beijing Holstein Cows

  • Chu, M.X.;Shi, S.K.
    • Asian-Australasian Journal of Animal Sciences
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    • v.15 no.11
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    • pp.1527-1530
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    • 2002
  • Factor analysis was applied to the phenotypic correlation matrix of 15 linear type traits (scored linearly 1 to 50 points) for 2035 Holstein cows of 38 sires computed from data collected between 1988 and 1992 in Beijing Shuangqiao Farm and Beijing Xijiao Farm. The 15 linear type traits were stature, body strength, body depth, dairy form, rump angle, rump length, rump width, rear leg side view, foot angle, fore udder attachment, rear udder height, rear udder width, udder cleft, udder depth and teat placement rear view. The first four components accounted for 49.1% of the total variance in type scores. Factor 1 reflected strong cows, with deep bodies, with long and wide rumps, and tall in stature. Factor 2 reflected cows with well attached fore udders, wide rear udders and whose udders were supported by strong suspensory ligaments with close teat placement. Factor 3 reflected cows with good dairyness, sickled in the hocks, high rear udders and udder floors above the hocks. Factor 4 reflected cows with sloping rumps from hooks to pins and with steep foot angle. Principal component and factor analyses are useful to clarify the relationships among type traits.

The Relationship with Parents and Personality Traits as Related to College Students' Friendships Quality : Moderation Role of Personality Traits (남녀 대학생의 부.모와의 관계 및 성격특성이 친구관계에 미치는 영향 : 성격특성의 중재역할)

  • Yoon, Mi-Sun;Park, Seong-Yeon;Lee, Eun-Gyoung
    • Journal of Families and Better Life
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    • v.29 no.2
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    • pp.101-111
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    • 2011
  • The purpose of study was to examine the associations between relationship with parents, personality traits and friendship quality among college students. A total of 373 college students (mean age=20.45, 53.6% girls) responded to questionnaires IPPA-R(Raja, McGee & Stanton, 1992) and IPIP(Goldberg, 1999). Pearson Correlation and regression analysis were used for data analysis 1) Both male and female students who have positive experiences with parents positive experiences with their friends. 2) For male college students, extroversion, openness to experience, agreeableness and conscientiousness were positively correlated with friendship quality. However, for female students, only extroversion and agreeableness were positively associated with friendship quality whereas neuroticism was negatively associated with friendship quality. 3) A good relationships with significantly interacted with conscientiousness of personality traits in predicting male students' friendship quality. For female college students, the moderating effect of extroversion was found in the link between relationship with mother and friendship quality.

The Relationship among bus Driver's Personality Traits, Safety Job Performance and Traffic Accidents (버스 운전자들의 성격 특성과 안전 직무수행 및 교통사고와의 관계)

  • Ahn, Woohyun;Lee, Sunhee;Park, Sunyoung
    • Journal of the Korean Society of Safety
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    • v.29 no.2
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    • pp.68-75
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    • 2014
  • The study examined the relationship between six broad personality traits(i.e., HEXACO; Honesty-humility, Emotionality, eXtraversion, Agreeableness, Conscientiousness, Openness to experience), safety job performance, and traffic accidents of Korean occupational bus drivers. Based on the job performance model, we included safety participation as well as safety compliance as safety job performance. Analyses on the data from a total of 492 bus drivers showed that all HEXACO personality traits except Honesty-humility, were valid predictors for both safety compliance and safety participation. Honesty-humility was only related to safety compliance. Among the six personality traits, high conscientiousness and low emotionality were best predictors of safety job performance. As for traffic accidents, conscientiousness was a sole significant predictor. Furthermore, the mediation analysis showed that the effect of conscientiousness on traffic accidents was completely explained by safety compliance and safety participation. The implications of the current findings for practice and future research as well as the limitations of the current study were discussed.

Effect of Alpha-lactalbumin Gene Polymorphism on Milk Production Traits in Water Buffalo

  • Dayal, S.;Bhattacharya, T.K.;Vohra, V.;Kumar, P.;Sharma, Arjava
    • Asian-Australasian Journal of Animal Sciences
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    • v.19 no.3
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    • pp.305-308
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    • 2006
  • A genetic study was conducted to elucidate the effect of alpha-Lactalbumin (${\alpha}$-LA) gene polymorphism on milk production traits involving total milk yield and daily milk yield during first lactation in two breeds of water buffaloes namely, Murrah and Bhadawari. Single strand conformation polymorphism (SSCP) was carried out to explore genetic polymorphism present at this locus. For this study, exon 1 region of ${\alpha}$-LA was analyzed. Finally, polymorphism data was associated with milk production traits by employing least square analysis. In Murrah buffalo, five genotypes such as AB, BB, BC, CC and CD and four alleles A, B, C and D were detected whereas in Bhadawari buffalo two genotypes namely, AB and BC and three alleles namely, A, B and C were found. Genotypes showed significant effects ($p{\leq}0.05$) on total milk yield and daily milk yield in Bhadawari buffalo but had non-significant effects on these traits in Murrah buffalo.

Identification of Quantitative Trait Loci Associated with Traits of Soybean for Sprout

  • Lee, Suk-Ha;Park, Keum-Yong;Lee, Hong-Suk;H. Roger Boerma
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.44 no.2
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    • pp.166-170
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    • 1999
  • The identification of quantitative trait loci (QTL) has the potential to enhance the efficiency of im- proving food processing traits of soybean. In this study, 92 restriction fragment length polymorphism (RFLP) loci and two morphological markers (W$_1$ and T) were used to identify QTL associated with food processing traits of soybean for sprout in 83 F$_2$-derived lines from a cross of 'Pureun' x 'Jinpum 2'. The genetic map consisted of 76 loci which covered about 760 cM and converged into 20 linkage groups. Eighteen markers remained unlinked. Phenotypic data were collected for hypocotyl length, abnormal seedling rate, and sprout yield seven days after seed germination at 2$0^{\circ}C$. Based on the single-factor analysis of variance, eight independent markers were associated with hypocotyl length. Four of seven markers associated with abnormal seedling rate were identified as independent. Seven loci were associated with sprout yield. For three different traits, much of genetic variation was explained by the identified QTL in this population. Several RFLP markers in linkage group (LG) Bl were detected as being associated with three traits, providing a genetic explanation for the biological correlation of sprout yield with hypocotyl length (r=OA07***) and with abnormal seedling rate (r=-406***).

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The Impact of Aging Anxiety and Successful Aging on the Personality Traits of Elderly (노인의 성격특성이 노화불안과 성공적 노화에 미치는 영향)

  • Yang, Nam Young
    • Journal of Home Health Care Nursing
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    • v.23 no.2
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    • pp.177-185
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    • 2016
  • Purpose: In this study, we sought to identify the impact of aging anxiety and successful aging on the personality traits of elderly. Method: Subjects were 108 elderly persons aged more than 65 years. Data collected from June to November 2015 were analyzed using descriptive statistics, t-tests, ANOVA, Pearson's correlation coefficients, and stepwise multiple regression. Results: With regard to the mean scores of personality traits, conscientiousness yielded the highest score, and neuroticism the lowest. The mean score on aging anxiety was below average, and that on successful aging was above average. Aging anxiety differed significantly according to age, present job, economic status, and health status. Successful aging differed significantly according to having a spouse, economic status, and health status. Significant correlations were found between anxiety and conscientiousness, extraversion, and neuroticism, and between successful aging and conscientiousness, agreeableness, extraversion, openness, and neuroticism. Conscientiousness and neuroticism had an effect on aging anxiety (23.2%), whereas conscientiousness, agreeableness, extraversion, openness, and neuroticism affected aging anxiety (45.3%). Conclusion: These findings indicate that personality traits reduce aging anxiety and lead to successful aging among elderly.

The results of meat quality traits and sensory characteristics according to the concentration of androstenone in uncastrated pigs

  • Shah Ahmed Belal;Jong-Hyun Jung
    • Journal of Animal Science and Technology
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    • v.66 no.2
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    • pp.387-397
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    • 2024
  • Pork quality is determined by several attributes, among which odor and taste are the utmost significant. Therefore, this study was aimed to assess the effects of boar odor hormone concentration on the quality traits and sensory acceptability of pork. A total twenty-six (26) non-castrated 3-way crossbred (Landrace × Yorkshire × Duroc) pigs were selected with an average body weight (ABW) 115.6 kg before to slaughter. The three treatment groups (low, medium and high) were divided according to the androstenone concentration. In experiment 1, for meat quality traits carcass was selected based on androstenone concentration: low (LC, 0.64-0.69 ㎍/g, n = 9), medium (MC, 0.70-0.99 ㎍/g, n = 7) and high (HC, 1.00-1.69 ㎍/g, n = 10). In experiment 2, for sensory evaluation carcasses were also selected based on the abovementioned conditions. Results revealed that androstenone concentration not effect on proximate components, meat quality traits and fatty acids except palmitoleic acid. Sensory evaluation data showed that boar taint and meat boar taint were significantly increased in a concentration-dependent manner from low to high, whereas, gravy and meat flavor preference were significantly increased in LC group than HC group. In addition, correlation analysis showed that boar taint and meat boar taint were positively, and gravy and meat flavor preference were negatively correlated with boar taint hormones. In essence, our findings indicate that androstenone concentration had no effect on meat qualities, but a high concentration of androstenone had a negative effect on the sensory characteristics in uncastrated pigs.

Weighted single-step genome-wide association study to reveal new candidate genes for productive traits of Landrace pig in Korea

  • Jun Park;Chong-Sam Na
    • Journal of Animal Science and Technology
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    • v.66 no.4
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    • pp.702-716
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    • 2024
  • The objective of this study was to identify genomic regions and candidate genes associated with productive traits using a total of 37,099 productive records and 6,683 single nucleotide polymorphism (SNP) data obtained from five Great-Grand-Parents (GGP) farms in Landrace. The estimated of heritabilities for days to 105 kg (AGE), average daily gain (ADG), backfat thickness (BF), and eye muscle area (EMA) were 0.49, 0.49, 0.56, and 0.23, respectively. We identified a genetic window that explained 2.05%-2.34% for each trait of the total genetic variance. We observed a clear partitioning of the four traits into two groups, and the most significant genomic region for AGE and ADG were located on the Sus scrofa chromosome (SSC) 1, while BF and EMA were located on SSC 2. We conducted Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG), which revealed results in three biological processes, four cellular component, three molecular function, and six KEGG pathway. Significant SNPs can be used as markers for quantitative trait loci (QTL) investigation and genomic selection (GS) for productive traits in Landrace pig.