• 제목/요약/키워드: C. sp

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Isolation and Characterization of Acinetobacter sp. BD5 Producing Lipolytic Enzyme (Lipolytic 효소를 생산하는 Acinetobacter sp. BD5 균주의 분리 및 특성)

  • Park, In-Hye;Kim, Sun-Hee;Lee, Sang-Cheol;Ahn, Soon-Cheol;Kim, Cheol-Min;Choi, Yong-Lark
    • Journal of Life Science
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    • 제16권4호
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    • pp.555-560
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    • 2006
  • A bacterium producing novel lipolytic enzyme was isolated from house sewage and identified as Acinetobacter sp. BD5 based on physiological characterization and 16S rDNA sequencing. The lipolytic activity of Acinetobacter sp. BD5 was tested using an EL agar medium and CE agar medium supplemented with 1% tributyrin and olive oil, respectively. The formation of a clear zone around the colony was detected by agar medium supplemented with 1% tributyrin and olive oil, respectively and Acinetobacter sp. BD5 formed powder-like zone around the colony on LB agar medium containing Tween 20. The quantitative lipolytic activity was determined by using p-NP butyrate as substrate. Acinetobacter sp. BD5 secreted the lipolytic enzyme during exponential growth phase, reaching a maximum amount after 6 hours of incubation. The lipolytic enzyme was found to be optimally active at $60^{\circ}C$ and retained more than 70% at $70-80^{\circ}C$. It displayed a high degree of activity in a pH of 7.0 to 10.6, with an optimal pH of 9.0.

Reproduction of Water Flea by the Culture Conditions (배양조건에 따른 물벼룩의 개체생산 특성)

  • Choe, Sung-Hun;Lim, Byung-Jin
    • Korean Journal of Ecology and Environment
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    • 제36권2호통권103호
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    • pp.208-214
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    • 2003
  • Four species of water fleas (Daphnia magna, Daphnia pulex, Daphnia galeata, and Moina macrocopa) were examined for the clarification of their reproduction with culture conditions. The reproduction tests of water flea by the culture conditions were carried out. For the comparison of the reproduction rate, five media (manure-soil medium, DIN medium, M4 medium, EPA medium, fertilizer medium) were applied to determine the best medium. Daphnia magna, Daphnia pulex, and Moina macrocopa were appeared the best reproduction in the manure-soil medium at $20^{\circ}C.$ The lifespan and young reproduction were better in manure-soil medium than the others. But Daphnia galeata was lived for 34 days in the fertilizer medium at $20^{\circ}C.$ The culture of Daphnia galeata was difficult to rear than the other species. In the current study, the microcystin of Microcystis sp. did not particularly affect on the survival of water fleas. But the lifespan was short and the reproduction rate was low. Therefore water flea have a preference for Scenedesmus sp. than Microcystis sp. On the condition of the feeding Scenedesmus sp., all examined water fleas appeared to have the longest lifespan and the most young water fleas produced at any medium and temperature as compared with the feeding the Microcystis sp. For the culture temperature, the lifespan was longer on $20^{\circ}C$ than $15^{\circ}C$.

Isolation of Agarivorans sp. KC-1 and Characterization of Its Thermotolerant β-Agarase (한천분해세균 Agarivorans sp. KC-1의 분리 및 내열성 β-아가라제의 특성 규명)

  • Min, Kyung-Cheol;Lee, Chang-Eun;Lee, Dong-Geun;Lee, Sang-Hyeon
    • Journal of Life Science
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    • 제28권9호
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    • pp.1056-1061
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    • 2018
  • This article reports an agar-degrading marine bacterium and characterizes its agarase. The agar-degrading marine bacterium, KC-1, was isolated from seawater on the shores of Sacheon, in Gyeongnam province, Korea, using Marine Broth 2216 agar medium. To identify the agar-degrading bacterium as Agarivorans sp. KC-1, phylogenetic analysis based on the 16S rRNA gene sequence was used. An extracellular agarase was prepared from a culture medium of Agarivorans sp. KC-1, and used for the characterization of enzyme. The relative activities at 20, 30, 40, 50, 60, and $70^{\circ}C$ were 65, 91, 96, 100, 77, and 35%, respectively. The relative activities at pH 5, 6, 7, and 8 were 93, 100, 87, and 82%, respectively. The extracellular agarase showed maximum activity (254 units/l) at pH 6.0 and $50^{\circ}C$ in 20 mM of Tris-HCl buffer. The agarase activity was maintained at 90% or more until 2 hr exposure at $20^{\circ}C$, $30^{\circ}C$ and $40^{\circ}C$, but it was found that the activity decreased sharply from $60^{\circ}C$. A zymogram analysis showed that Agarivorans sp. KC-1 produced 3 agar-degrading enzymes that had molecular weights of 130, 80, and 69 kDa. A thin layer chromatography analysis suggested that Agarivorans sp. KC-1 produced extracellular ${\beta}$-agarases as it hydrolyzed agarose to produce neoagarooligosaccharides, including neoagarohexaose (21.6%), neoagarotetraose (32.2%), and neoagarobiose (46.2%). These results suggest that Agarivorans sp. KC-1 and its thermotolerant ${\beta}$-agarase would be useful for the production of neoagarooligosaccharides that inhibit bacterial growth and delay starch degradation.

Cloning and Nucleotide Sequence Analysis of xylC Gene Encoding 5C-2HMS Dehydrogenase from Pseudomonas sp. S-47. (Pseudomonas sp. S-47로부터 5-Chloro-2-Hydroxymuconic Semialdehyde Dehydrogenase를 암호화하는 xylG 유전자의 클로닝 및 염기서열 분석)

  • Park, Song-Yi;Lee, Dong-Hoon;Kim, Young-Soo;Lee, Kyung;Kim, Chi-Kyung
    • Microbiology and Biotechnology Letters
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    • 제30권1호
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    • pp.8-14
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    • 2002
  • Pseudomonas sp. S-47 is capable of degrading 4-chlorobenzoate to produce 5-chloro-2-hydroxymuconic semialdehyde (5C-2HMS) by the enzymes encoding by xylXYZLTE cluster. In this study, the resulting 5C-2HMS was confirmed to be transformed to 5-chloro-2-hydroxymuconic acid (5C-2HMA) by 5C-2HMS dehydrogenase. The xylG gene encoding 5C-2HMS dehydrogenase was cloned from the chromosomal DNA of strain S-47. The nucleotide sequence of xylG showed to be composed of 1,600 base pairs with ATG initiation and TGA termination codons. A deduced amino acid sequence of the 5C-2HMS dehydrogenase (XylG) exhibited 98%, 93%, and 89% identity with those of the dehydrogenases from P. putida mt-2, P. putida G7, and Pseudomonas sp. CF600, respectively.

Characteristics of Catechol 2,3-Dioxygenase Produced by 4-Chlorobenzoate-degrading Pseudomonas sp. S-47

  • Kim, Ki-Pil;Seo, Dong-In;Min, Kyung-Hee;Ka, Jong-Ok;Park, Yong-Keun;Kim, Chi-Kyung
    • Journal of Microbiology
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    • 제35권4호
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    • pp.295-299
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    • 1997
  • Pseudomonas sp. S-47 is capable of transforming 4-chlorobenzoate to 4-chlorocatechol which is subsequently oxidized bty meta-cleavage dioxygenase to prodyce 5-chloro-2-hydroxymuconic semialdehyde. Catechol 2,3-dioxygenase (C23O) produced by Pseudomonas sp. S-47 was purified and characterized in this study. The C23O enzyme was maximally produced in the late logarithmic growth phase, and the temperature and pH for maximunm enzyme activity were $30{\sim}35^{\circ}C$ and 7.0, respectively. The enzyme was purified and concentrated 5 fold from the crude cell extracts through Q Sepharose chromatography and Sephadex G-100 gel filtration after acetone precipitation. The enzyme was identified as consisting of 35 kDa subunits when analyzed by SDS-PAGE. The C23O produced by Pseudomonas sp. S-47 was similar to Xy1E of Pseudomonas putida with respect to substrate specificity for several catecholic compounds.

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Isolation and Characteristics of Brachybacterium sp. SY -97 Killing the Harmful Dinoflagellate Cochlodinium polykrikoides (유해적조생물 Cochlodinum polykrikoides를 살멸하는 Brachybacterium sp. SY-97의 분리 및 특성)

  • Kim, Yun-Sook;Jeong, Seong-Yun;Lee, Sang-Joon;Lee, Won-Jae
    • Journal of Environmental Science International
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    • 제18권4호
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    • pp.435-443
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    • 2009
  • A bacterial strain SY-97 that showed algicidal activity against Cochlodinium polykrikoides was isolated from coastal water of Uljin (eastern coast of Korea) in August, 2005. The isolated strain was identified as Brachybacterium sp. by morphological and biological tests, and analysis of 16S rDNA sequence. The optimal culture conditions for the growth of strain SY-97 were $30^{\circ}C$, initial pH 7.0, and salinity 2.0%. From the result of cell culture insert experiment, Brachybacterium sp. SY-97 is assumed to produce secondary metabolites which have algicidal activity. When 10% culture filtrate of this strain was applied to C. polykrikoides ($1.2{\times}10^4\;cells/m{\ell}$) cultures, 100% of C. polykrikoides cells was destroyed within 15 hours. The released algicides were heat-tolerant to $100^{\circ}C$ and stable in pH $6.0{\sim}10.0$. These results suggest that Brachybacterium sp. SY-97 is potentially useful for controlling outbreaks of C. polykrikoides.

Purification and Characterization of Cyclodextrin Glycosyltransferase from Alkalophilic Bacillus sp (호알카리성 Bacillus sp.의 cyclodextrin glycosyltransferase의 정제와 특성)

  • 정용준;공인수;유주현;강윤숙
    • Microbiology and Biotechnology Letters
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    • 제18권1호
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    • pp.44-48
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    • 1990
  • Alkalophilic sp. YC-335 isolated from soil was capable of producing large amount of cyclodextrin glycosyltransferase (CGTase) in culture broth. This enzyme was successively purified 52.9 folds with 17.8 yield by ethanol precipitation, DEAE-Toyopearl column chromatography and Sephadex G-100 column chromatography. The purified enzyme have a molecular weight of approximately 75,000 estimated by SDS polyaerylamide gel electrophoresis. The optimum pH and temperature for the enzyme activity were 6.0 and 5$0^{\circ}C$, respectively. The enzyme stable between pH 6 and 10, and up to 5$0^{\circ}C$. The thermostability of the enzyme was increased up to 6$0^{\circ}C$ by the addition of 15mM CaCl$_2$.

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Isolation and Identification of Serratia sp. Producing Cephalosporin C Amidase (Cephalosporin C Amidase를 생산하는 Serratia sp. 균주의 분리와 동정)

  • 신중철;강용호;김영수
    • Microbiology and Biotechnology Letters
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    • 제27권2호
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    • pp.96-101
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    • 1999
  • Various side-chains are introduced to the 7-amino position of 7-aminocepha-losporanic acid (7-ACA) to make semi-synthetic cephalosporin antibiotics. In order to convert cephalosporin C (CPC) to 7-ACA, two enzymatic reactions are generally imployed. Glutary1-7-aminocephalosporanic acid (Gl-7-ACA) acylase is involved in the second step where the reaction intermediate, Gl-7-ACa is converted into 7-ACA. It was recently reported that CPC amidase can convert CPC directly into 7-ACA in a single enzymatic reaction. A study was undertaken to screen microorganisms conferring enzyme activity to convert Gl-7-ACA or CPC into 7-ACA by one or two enzymatic reactions. In order to screen the microorganisms rapidly, a non-$\beta$-lactam model compund, glutaryl-$\rho$-nitroanilide, was utilized in an early stage, thereafter the selected microorganisms were examined with real substrates. One microorganism exhibiting both Gl-7-ACA acylase and CPC amidase activities was obtained by the colorimetry method and HPLC assay, and was identified as a strain of Serratia species, designated as Serratia sp. N14.4. The optimal fermentation conditions for Serratia sp. N14.4 was pH9.0 and 3$0^{\circ}C$.

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Copepods (Crustacea) Associated with Marine Invertebrates from the Moluccas

  • Kim, Il-Hoi
    • Animal Systematics, Evolution and Diversity
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    • nspc6호
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    • pp.1-126
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    • 2007
  • Thirty new species consisting of 24 poecilostomatoid and six siphonostomatoid copepods are described as associates of marine invertebrates from the Moluccas. New taxa in the order Poecilostomatoida are Amarda curvus n. sp., Anchimolgus gracilipes n. sp., A. partenuipes n. sp., A. parangensis n. sp., A. hastatus n. sp., Andrianellus papillipes n. sp., Exodontomolgus communis n. gen. n. sp., Jamescookina moluccensis n. sp., Odontomolgus flammeus n. sp., O. parvus n. sp., O. pavonus n. sp., Paranchimolgus parallelus n. gen. n. sp., and Scyphuliger karangmiensis n. sp. in the family Anchimolgidae; Enalcyonium circulatum n. sp. and E. ceramensis n. sp. in the family Lamippidae; Parastericola rimosus n. gen. n. sp. in the family Lichomolgidae; Pseudanthessius truncus n. sp. and P. planus n. sp. in the family Pseudanthessiidae; Acanthomolgus gomumuensis n. sp., A. dispadactylus n. sp., A. bandaensis n. sp., A. ambonensis n. sp., Kombia avitus n. sp. and Pionomolgus moluccensis n. sp. in the family Rhynchomolgiae. New taxa in the order Siphonostomatoida are Cryptopontius acutus n. sp. in the family Artotrogidae; Asteropontius fungicola n. sp., A. gonioporae n. sp., Collocheres humesi n. sp. and C. amicus n. sp. in the family Asterocheridae; and Molucomes ovatus n. gen. n. sp. in the family Stellicomitidae. Species new to the Moluccas and new host records are also included. Lists of 263 species of associated copepods known from the Moluccas and their 135 species of invertebrate hosts are provided.

Properties of Chitobiase Produced by Streptomyces sp. (Strepsomyces속 균주가 생산한 Ghitobiase의 효소학적 성질)

  • 김중배
    • The Korean Journal of Food And Nutrition
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    • 제5권2호
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    • pp.132-136
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    • 1992
  • Streptomyces sp. YB-88-20 was Isolated from soil and the properties of chitobiase were investigated. The optimal reaction condition for the enzyme was pH 5.5 and 4$0^{\circ}C$ , and was stable in the range of pH 4. 0 to 5.5 and temperature at 4$0^{\circ}C$, and 40 min, respectively The enzyme was inactivated by heating at 45$^{\circ}C$ for 1 hr. The enzyme was slightly activated by Mna+. Mg2+, but inhibited by Fea+. Km and activation energy was 1.5072 M and 8.314 kcal/mol.

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