• Title/Summary/Keyword: Biological evolution

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Seasonal variation in longitudinal connectivity for fish community in the Hotancheon from the Geum River, as assessed by environmental DNA metabarcoding

  • Hyuk Je Lee;Yu Rim Kim;Hee-kyu Choi;Seo Yeon Byeon;Soon Young Hwang;Kwang-Guk An;Seo Jin Ki;Dae-Yeul Bae
    • Journal of Ecology and Environment
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    • v.48 no.1
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    • pp.32-48
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    • 2024
  • Background: Longitudinal connectivity in river systems strongly affects biological components related to ecosystem functioning, thereby playing an important role in shaping local biodiversity and ecosystem health. Environmental DNA (eDNA)-based metabarcoding has an advantage of enabling to sensitively diagnose the presence/absence of species, becoming an efficient/effective approach for studying the community structure of ecosystems. However, little attention has been paid to eDNA-based biomonitoring for river systems, particularly for assessing the river longitudinal connectivity. In this study, by using eDNA we analyzed and compared species diversity and composition among artificial barriers to assess the longitudinal connectivity of the fish community along down-, mid- and upstream in the Hotancheon from the Geum River basin. Moreover, we investigated temporal variation in eDNA fish community structure and species diversity according to season. Results: The results of species detected between eDNA and conventional surveys revealed higher sensitivity for eDNA and 61% of species (23/38) detected in both methods. The results showed that eDNA-based fish community structure differs from down-, mid- and upstream, and species diversity decreased from down to upstream regardless of season. We found that there was generally higher species diversity at the study sites in spring (a total number of species across the sites [n] = 29) than in autumn (n = 27). Nonmetric multidimensional scaling and heatmap analyses further suggest that there was a tendency for community clusters to form in the down-, mid- and upstream, and seasonal variation in the community structure also existed for the sites. Dominant species in the Hotancheon was Rhynchocypris oxycephalus (26.07%) regardless of season, and subdominant species was Nipponocypris koreanus (16.50%) in spring and Odontobutis platycephala (15.73%) in autumn. Artificial barriers appeared to negatively affect the connectivity of some fish species of high mobility. Conclusions: This study attempts to establish a biological monitoring system by highlighting the versatility and power of eDNA metabarcoding in monitoring native fish community and further evaluating the longitudinal connectivity of river ecosystems. The results of this study suggest that eDNA can be applied to identify fish community structure and species diversity in river systems, although some shortcomings remain still need to be resolved.

Integration of Optimality, Neural Networks, and Physiology for Field Studies of the Evolution of Visually-elicited Escape Behaviors of Orthoptera: A Minireview and Prospects

  • Shin, Hong-Sup;Jablonski, Piotr G.
    • Journal of Ecology and Environment
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    • v.31 no.2
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    • pp.89-95
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    • 2008
  • Sensing the approach of a predator is critical to the survival of prey, especially when the prey has no choice but to escape at a precisely timed moment. Escape behavior has been approached from both proximate and ultimate perspectives. On the proximate level, empirical research about electrophysiological mechanisms for detecting predators has focused on vision, an important modality that helps prey to sense approaching danger. Studies of looming-sensitive neurons in locusts are a good example of how the selective sensitivity of nervous systems towards specific targets, especially approaching objects, has been understood and realistically modeled in software and robotic systems. On the ultimate level, general optimality models have provided an evolutionary framework by considering costs and benefits of visually elicited escape responses. A recent paper showed how neural network models can be used to understand the evolution of visually mediated antipredatory behaviors. We discuss this new trend towards integration of these relatively disparate approaches, the proximate and the ultimate perspectives, for understanding of the evolution of behavior of predators and prey. Focusing on one of the best-studied escape pathway models, the Orthopteran LGMD/DCMD pathway, we discuss how ultimate-level optimality modeling can be integrated with proximate-level studies of escape behaviors in animals.

A Study on the evolution theory of digital game rules (디지털 게임 규칙의 진화론에 관한 연구)

  • Chon, Suk;Yoon, Joon-Sung
    • Journal of Korea Game Society
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    • v.9 no.1
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    • pp.21-31
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    • 2009
  • This research is to classify game rules which are important factors for the game, and to define the basis of the each level of rules and concepts. In terms of these definitions, the process of transformation in the game rule is analyzed, and examined the development related to evolution. The rule of digital game is analogous to the biological evolution. From this point of view, This research presents the structural similarities between the game rules and biological evolution. It is for the investigation of the development using new perspective and for the conceptualization of the process. Moreover it makes us rediscover the game as a scholastic research subject.

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The Evolution of Caregiving and Attachment (양육과 애착의 진화)

  • Choi, SungKu
    • Korean Journal of Biological Psychiatry
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    • v.24 no.3
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    • pp.83-94
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    • 2017
  • Caregiving for the children seems to be one of the most challenging tasks for the parents who should devote themselves totally despite endangering them. From the evolutionary perspective, this human behavior must have been the advantage in the survival of the species and rooted in ethological origin. John Bowlby, a child psychiatrist, psychoanalyst, and great developmental researcher, had formulated the attachment theory linking psychoanalysis and ethology through evolutionary biology. His and later following researchers' outcomes have provided enormous influence on viewing parental caregiving and the insight of human relationships and interventions. This article overviews the attachment theory in terms of the goal oriented cybernetic system to gain the survival advantage of the offspring and investigates the evolutionary origin of the caregiving and attachment from the retiles of the Mesozoic era to the mammalian revolution and finally to the human being. Deeper understanding of the nurturance and adult relationships from the standpoint of evolution can provide clinical utility of awareness of clients' lives.

Development of templated RuO2 nanorod and nanosheet electrodes to improve the electrocatalytic activities for chlorine evolution (전기적 염소 발생 촉매활성을 위한 성형된 루테늄 산화물 나노로드와 나노시트 전극의 개발)

  • Luu, Tran Le;Kim, Choonsoo;Yoon, Jeyong
    • Journal of Korean Society of Water and Wastewater
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    • v.31 no.5
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    • pp.373-381
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    • 2017
  • $RuO_2$ is a common active component of Dimensionally Stable Anodes (DSAs) for chlorine evolution that can be used in wastewater treatment systems. The recent improvement of chlorine evolution using nanostructures of $RuO_2$ electrodes to increase the treatment efficiency and reduce the energy consumption of this process has received much attention. In this study, $RuO_2$ nanorod and nanosheet electrodes were simply fabricated using the sol-gel method with organic surfactants as the templates. The obtained $RuO_2$ nanorod and nanosheet electrodes exhibit enhanced electrocatalytic activities for chlorine evolution possibly due to the active surface areas, especially the outer active surface areas, which are attributed to the increase in mass transfers compared with a conventional nanograin electrode. The electrocatalytic activities for chlorine evolution were increased up to 20 % in the case of the nanorod electrode and 35% in the case of the nanosheet electrode compared with the nanograin electrode. The $RuO_2$ nanorod 80 nm in length and 20-30 nm in width and the $RuO_2$ nanosheet 40-60 nm in length and 40 nm in width are formed on the surface of Ti substrates. These results support that the templated $RuO_2$ nanorod and nanosheet electrodes are promising anode materials for chlorine evolution in future applications.

Recent progress in studies of the Cladocera (Crustacea: Branchiopoda) of South Korea with seven new records for the Korean Peninsula

  • Kotov, Alexey A.;Sinev, Artem Y.;Garibian, Petr G.;Neretina, Anna N.;Jeong, Hyun Gi;Lee, Wonchoel;Chae, Kyu-Seok;Min, Gi-Sik
    • Journal of Species Research
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    • v.6 no.spc
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    • pp.227-246
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    • 2017
  • A study of the Cladocera (Crustacea: Branchiopoda) from the Korean Peninsula resulted in the checklist of Jeong et al. (2014). Several sampling campaigns conducted by our team since 2014, with the framework of the programs supported by the National Institute of Biological Resources (NIBR), have resulted in a considerable increase in the number of water bodies studied in South Korea. In this report, seven new records for the Korean Peninsula are provided: (1) Macrothrix vietnamensis Silva-Briano, Dieu and Dumont, 1999; (2) Disparalona chappuisi (Brehm, 1931); (3) Pleuroxus(Picripleuroxus) quasidenticulatus (Smirnov, 1996); (4) Acroperus africanus Neretina and Kotov, 2015; (5) Alona ossiani herricki Sinev, 2013; (6) Coronatella trachystriata (Chen, Zhang and Liu, 1994); (7) Leydigia louisi Jenkin, 1934. Most of these taxa belong to the southern thermophilic complex. In addition several populations of Pleuroxus (Picripleuroxus) denticulatus Birge, 1879 and Pseudochydorus globosus (Baird, 1843) were re-studied, and their presence in Korea is confirmed. Through increased collection efforts and the application of molecular methods we are confident that more new records of Korean fauna will be published in the near future.

Development and Characterization, and Application of Ten Polymorphic Microsatellite Markers in the Crested Ibis Nipponia nippon from South Korea

  • Choi, Eun Hwa;Kim, Gyeongmin;Baek, Su Youn;Kim, Sung Jin;Hwang, Jihye;Jun, Jumin;Jang, Kuem Hee;Ryu, Shi Hyun;Hwang, Ui Wook
    • Animal Systematics, Evolution and Diversity
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    • v.36 no.2
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    • pp.154-158
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    • 2020
  • The Asian crested ibis Nipponia nippon is one of the world's most endangered species. Except for the Sanxii population from China, it is known that all of the crested ibis populations from East Asia have been extinguished. In these days, most of them are being inbred as captive populations in China, South Korea, and Japan, which caused their low expected genetic diversity. Microsatellite markers are well known as a suitable DNA marker for exploring genetic diversity among captive populations of a variety of endangered species. In the present study, ten microsatellite markers were developed for the captive populations of the South Korean crested ibis, which were employed to examine the level of genetic diversity with the two founders from Sanxii, China and the 70 descendants of them. As a result, the mean number of gene diversity, observed heterozygosity, and expected heterozygosity of the captive population were 0.70, 0.84, and 0.70 respectively. It revealed that the captive population of South Korea is as genetically more stable than we expected. In addition, the principal coordinates analysis and genetic structure analyses showed that the captive population of N. nippon can be divided into the two different genetic groups. The developed microsatellite markers here could be helpful for crested ibis conservation in East Asian countries such as China and Japan as well as South Korea.

Effects of Recombination on the Pathogenicity and Evolution of Pepper mottle virus

  • Jonson, Miranda Gilda;Seo, Jang-Kyun;Cho, Hong-Soo;Kim, Jeong-Soo;Kim, Kook-Hyung
    • The Plant Pathology Journal
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    • v.25 no.4
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    • pp.417-421
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    • 2009
  • The analysis of the full length genome of Korean isolates of Pepper mottle virus (PepMoV) in previous study showed molecular variations and are found to be related to symptom variation and pathogenicity (Kim et al., 2009, Virus Res. 144:83-88). To fully understand the molecular variation of PepMoV in Korea, we further assessed the role of RNA recombination to biological variation and evolution of PepMoV. Full-length genome of a total of 17 Korean-PepMoV and 2 American (CA and FL) isolates were examined for possible detection of genetic recombination using different recombination detections programs and detected 5 and 8 tentative recombination events using RDP3 and Splits Tree4 programs, respectively. Interestingly, tentative recombinants detected such as isolates 57, 134 and 217 were previously identified as severe isolates and 205135 and 205136 as differentiating isolates (Kim et al., 2009, Virus Res. 144:83-88). In addition, recombination was frequently detected in the Vb isolate, the first PepMoV isolate reported in Korea, suggesting significant involvement in the evolution of PepMoV in Korea. These initial results of our recombination analyses among PepMoV isolates in Korea may serve as clues to further investigate the biological variations and evolution of PepMoV brought about by recombination.