• Title/Summary/Keyword: Biodiversity Information

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A visual identification key to Orchidaceae of Korea

  • Seo, Seon-Won;Oh, Sang-Hun
    • Korean Journal of Plant Taxonomy
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    • v.47 no.2
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    • pp.124-131
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    • 2017
  • Species identification is a fundamental and routine process in plant systematics, and linguistic-based dichotomous keys are widely used in the identification process. Recently, novel tools for species identification have been developed to improve the accuracy, ease to use, and accessibility related to these tasks for a broad range of users given the advances in information and communications technology. A visual identification key is such an approach, in which couplets consist of images of plants or a part of a plant instead of botanical terminology. We developed a visual identification key for 101 taxa of Orchidaceae in Korea and evaluated its performance. It uses short statements for image couplets to avoid misinterpretations by users. The key at the initial steps (couplets) uses relatively easy characters that can be determined with the naked eye. The final steps of the visual key provide images of species and information about distributions and flowering times to determine the species that best fit the available information. The number of steps required to identify a species varies, ranging from three to ten with an average of 4.5. A performance test with senior college students showed that species were accurately identified using the visual key at a rate significantly higher than when using a linguistic-based dichotomous key and a color manual. The findings presented here suggest that the proposed visual identification key is a useful tool for the teaching of biodiversity at schools, for the monitoring of ecosystems by citizens, and in other areas that require rapid, easy, and accurate identifications of species.

Morphological Studies of Developmental Stages of Oculotrema hippopotami (Monogenea: Polystomatidae) Infecting the Eye of Hippopotamus amphibius (Mammalia: Hippopotamidae) Using SEM and EDXA with Notes on Histopathology

  • Rubtsova, Nataliya Yu.;Heckmann, Richard A.;Smit, Willem J.;Luus-Powell, Wilmien J.;Halajian, Ali;Roux, Francois
    • Parasites, Hosts and Diseases
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    • v.56 no.5
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    • pp.463-475
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    • 2018
  • The present study was performed to observe histopathological effects of Oculotrema hippopotami Stunkard, 1924 infection in the eye of Hippopotamus amphibius, as well as to reveal new details of morphology and structural features of this monogenean and its comparison between 2 age stages of the parasite. This was done using both light and scanning electron microscopy, energy dispersive X-ray analysis (EDXA) and histopathology. The presence of a mixture of different generations (adult and sub-adult) in one host individual is common for Oculotrema Stunkard, 1924 in contrast to Polystoma Zeder, 1800. New metrical and graphical information obtained for adults and sub-adults compared with the previous studies. Here we show the presence of genital papillae in adults, metrical data on the distal part of the vas deferens. SEM micrographs of sperm ejaculatory structures and information about the flattened dorsal side of the body provided for the first time. Histopathological changes, such as necrosis and hemorrhage in host tissues as a result of O. hippopotami attachment structures are described. Structural analysis of different body parts of O. hippopotami of both age groups are also included. We show qualitative differences in the presence of hardening ions (S, P, Ca) in attachment structures (oral and haptor suckers) that increase with the age of the worm. The presence of sub-adults and adults on the same host, together with high levels of infection without high pathogenicity may account for Oculotrema being one of the most successful parasites among the Monogenea.

A Study on Design of Schema Integration based Biological Information Retrieval System (스키마 통합 기반 생명정보 검색시스템(BIRS) 설계에 관한 연구)

  • Han, Keon;Lee, Sang-Ho;Ahn, Bu-Young
    • Journal of Information Management
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    • v.40 no.1
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    • pp.217-234
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    • 2009
  • In computer-based virtual lab, a bioscience researcher who wants to obtain bio information first uses a biodiversity-related database to retrieve information on species, ecology and distribution of an organism. The researcher also needs to access gene/protein databases such as GenBank or PDB to find information on the organism's genetic sequence and protein structure. Furthermore, the researcher should search for academic papers containing the information on the organism so that his research is based on comprehensive and accurate information. This series of activities often undermines research efficiency as it takes a lot of time and causes inconvenience on the part of researchers. To solve such inconvenience, we analyzed various methods for integrated search and chosen schema integration. In addition, we analyzed each databases and extracted metadata for designing schema integration. This paper introduces a biological information retrieval system(BIRS) using schema integration and it's interface that will increase research efficiency for bioscience.

The Structure of Visual Cells in the Retina of the Pond Loach, Misgurnus anguillicaudatus (Pisces; Cobitidae)

  • Kim, Chi-Hong;Kim, Jae-Goo;Park, Jong-Young
    • Applied Microscopy
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    • v.45 no.4
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    • pp.254-258
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    • 2015
  • A histological study on the retina of Misgurnus anguillicaudatus was carried out by light microscopy and scanning electron microscopy as part of getting information about relation between its habitat and visual cells. The visual cells of the retina in M. anguillicaudatus, a bottom-dwelling freshwater pond loach in stagnant or slow waters such as swamps, reservoirs and paddy fields, consists of double cones and large rods. The cones form a row mosaic pattern in which the partners of double cones are linearly oriented with a large rod. In a double cone, the two members are unequal such that one cone may be longer than the other.

Characteristics of woodland changes in an urban fringe in Gwangju city (도시외곽지역의 산림변화 특성)

  • Kim, Keun-Ho
    • Korean Journal of Agricultural Science
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    • v.39 no.2
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    • pp.177-182
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    • 2012
  • It is widely recognised that changes in size and isolation of habitat patches have a negative impact on species richness and the distribution and persistence of populations. Thus, the aim of the research was to analyze the change, distribution and spatial characteristics of woodlands in an urban fringe landscape. The results indicated that there was a common trend of woodland loss across all landscape types while no new woodlands were established during 1976 and 2009. Small patches (less than 5 ha in size) were particularly vulnerable to and more likely to disappear due to human activities such as urbanisation. Changes in woodland cover were clearly observed between 1976 and 2009. Loss of many woodlands was caused by residential and infrastructural developments. As a result, woodlands were becoming smaller and more isolated. This trend probably had adverse effects on biodiversity. This woodland information can be used to identify the potential and specific needs for conservation planning in rapidly developing urban areas.

An Additional Species of Leucospis (Hymenoptera: Chalcidoidea: Leucospidae), New to South Korea (한국산 밑들이벌속(벌목: 좀벌상과: 밑들이벌과)의 미기록 1종 보고)

  • Kim, Chang-Jun;Lim, Jongok;Kim, Il-Kwon
    • Korean journal of applied entomology
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    • v.56 no.4
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    • pp.339-343
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    • 2017
  • Korean species of Leucospis Fabricius (Hymenoptera: Chalcidoidea: Leucospidae) are reviewed, with one newly-recognized species, Leucospis sinensis Walker, 1860. An identification key to the Korean Leucospis species, diagnoses, biological information and photographs of diagnostic characters are provided in the present study.

Checklist of Korean ciliates(Protozoa: Ciliophora)

  • Jung, Jae-Ho;Park, Mi-Hyun;Kim, Sun Young;Choi, Jung Min;Min, Gi-Sik;Kim, Young-Ok
    • Journal of Species Research
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    • v.6 no.3
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    • pp.241-257
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    • 2017
  • After the first record of a Korean ciliate in 1931, more than 130 papers have been published describing Korean ciliates. Of these records, the years 1997, 2012, and 2016 include milestone publications in Korea. Even though the publications provide summarized data about Korean ciliates with relevant literature citations, these publications included two nomenclatural errors, two misspellings, and one misidentification; nine species were transferred to other genera. Furthermore, the type specimens deposited in the laboratory of Prof. Joong Ki Choi (Inha University, Korea) were transferred to the National Marine Biodiversity Institute of Korea (MABIK) because of his retirement. Here, we provide an updated list of 331 Korean species described by 2016 and present information about the type specimens. We also and address the aforementioned problems with bringing together scattered data related to ciliate lists.

Prionchulus oleksandri (Nematoda: Mononchida) from Korea

  • Kim, Jiyeon;Kim, Taeho;Ryu, Shi Hyun;Park, Joong-Ki
    • Animal Systematics, Evolution and Diversity
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    • v.34 no.4
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    • pp.194-198
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    • 2018
  • The genus Prionchulus Cobb, 1916 represents a group of predaceous nematodes belonging to the family Mononchidae Chitwood, 1937, and is found worldwide. However, only five species have been reported thus far from Korea. Prionchulus oleksandri Winiszewska and Susulovsky, 2003 is reported for the first time from Korea, from sediments collected from the Nakdong River. This species is distinguished from other Prionchulus species by its truncated lip region with small cephalic papillae and refringens vaginae. In this study, morphological characters(detailed morphometrics) of P. oleksandri are described and illustrated using optical microscopy. DNA barcode sequence information (the D2-D3 region of 28S rDNA, 18S rDNA, and internal transcribed spacer rDNA) is also provided for the molecular identification of the species.

Trend Analysis of Research Topics in Ecological Research

  • Suntae Kim
    • Proceedings of the National Institute of Ecology of the Republic of Korea
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    • v.4 no.1
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    • pp.43-48
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    • 2023
  • This study analyzed research trends in the field of ecological research. Data were collected based on a keyword search of the SCI, SSCI, and A&HCI databases from January 2002 to September 2022. The seven keywords, including biodiversity, ecology, ecotourism, species, climate change, ecosystem, restoration, wildlife, were recommended by ecological research experts. Word clouds were created for each of the searched keywords, and topic map analysis was performed. Topic map analysis using biodiversity, climate change, ecology, ecosystem, and restoration each generated 10 topics; topic maps analysis using the ecotourism keyword generated 5 topics; and topic map analysis using the wildlife keyword generated 4 topics. Each topic contained six keywords.

Green Information Systems Research: A Decade in Review and Future Agenda (그린 정보시스템 연구: 과거 10년간 연구 동향 분석 및 향후 과제)

  • Lee, Ha-Bin
    • Informatization Policy
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    • v.27 no.4
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    • pp.3-23
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    • 2020
  • It has been two decades since Green Information System attracted scholars in information systems research. The surge of sustainability issues over the world naturally made Information Systems scholars to turn their attention to understanding how the use of Information Systems is making impact to our society and environments. This paper reviews studies on Green Information Systems(Green ISs) to evaluate efforts made in the last decade. Based on a systematic approach, 64 articles published in peer-reviewed international journals in Information Systems and Business & Management disciplines are analyzed to identify research gaps and propose future research agenda in Green ISs that include the application of psychological theory in the design of Green ISs, energy efficient IT/IS to respond to accelerated virtualization, and contribution of Green ISs to biodiversity.