• The Plant Pathology Journal
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• v.28 no.4
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• pp.454-454
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• 2012

• Journal of Mushroom
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• v.19 no.4
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• pp.272-278
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• 2021

Bacillus velezensis HKB-1 was isolated from the composted spent mushroom substrate of Lentinula edodes (LeCSMS) and inhibited mycelial growth of phytopathogenic fungal species, Phythhopthora capsici, Collectotrichum coccodes and Fusarium oxysporium by more than 70%. B. velezensis HKB-1 showed bacterial growth rate 10 to 100 times higher than that of other commercial bacterial media in water extract of LeCSMS supplemented with 1% molasses. The LeCSMS medium was effective in promoting the growth of pepper and controlling Phytophthora blight disease of pepper.

• Research in Plant Disease
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• v.10 no.4
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• pp.290-296
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• 2004

Bacterial blossom blight is one of the most important diseases of kiwifruit (Actinidia deliciosa). The disease occurs during flowering in the late May and disease outbreaks associated with rainfall during the flowering season have resulted in a severe reduction in kiwifruit production. The causal organism isolated from diseased blossoms of kiwifruits was identified as Pseudomonas syringae pv, syringae based on the physiological and biochemical characteristics and pathogenicity test. Dead fruit stalks, dead pruned twigs, fallen leaves and soils mainly provided R syringae pv. syringae with overwintering places in the kiwifruit orchards, and the inocula also overwintered on buds, trunks, branches, and twigs on the kiwifruit trees. Among the overwintering places, the incula were detected in the highest frequencies from dead fruit stalks. The population density of P. syringae pv. syringae was speculated to be over $1{\times}10^4$cfu/ml for the bacterial infection, and the optimum temperature for the bacterial growth ranged 20 to $25^{\circ}C$. The highest population density of P. syringae pv. syringae on the overwintering places was detected in May and June when the daily average temperature coincided with the optimum temperature for bacterial growth of P. syringae pv. syringae.

• The Plant Pathology Journal
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• v.22 no.4
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• pp.364-368
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• 2006

Survival of biocontrol agents and their effective colonization of rhizhosphere are the essential components for successful disease suppression. The effects of hydrogel supplement on bacterial survival and disease control were evaluated in pot and in the field. Addition of 2% hydrogel material to potting soil resulted in significant enhancement of colonization of biocontrol agent Serratia plymuthica A21-4 both in soil and rhizosphere of pepper plants. Rhizosphere colonization of S. plymuthica A21-4 retrieved from 40 days old pepper seedlings indicated 100 times higher bacterial population in hydrogel treated soil than in ordinary pot soil. The pepper plants sown in hydrogelated potting soil showed higher seed germination rate and the better growth of pepper plant than those in ordinary commercial pot soil. Although the suppression of Phytophthora capsid density in the potting soil by treatment of biocontrol agent A21-4 was not significantly different between in hydrogelated soil and ordinary potting soil, the suppression of Phytophthora blight between two treatments was significantly different. A21-4 treatment in hydrogelated potting soil was completely disease-free while same treatment in ordinary potting soil revealed 36% disease incidence. Our field study under natural disease occurrence also showed significantly less disease incidence(12.3%) in the A21-4 treatment in the hydrogelated soil compared to other treatments. Yield promotion of pepper by the A21-4 treatment in the hydrogelated potting soil was also recognized. Our results indicated that hydrogel amendment with biocontrol agent in pot soil would be a good alternative to protect pepper seedlings and increase plant yield.

• International Journal of Computer Science & Network Security
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• v.23 no.3
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• pp.57-66
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• 2023

Rice is an important food crop for most of the population in the world and it is largely cultivated in Pakistan. It not only fulfills food demand in the country but also contributes to the wealth of Pakistan. But its production can be affected by climate change. The irregularities in the climate can cause several diseases such as brown spots, bacterial blight, tungro and leaf blasts, etc. Detection of these diseases is necessary for suitable treatment. These diseases can be effectively detected using deep learning such as Convolution Neural networks. Due to the small dataset, transfer learning models such as vgg16 model can effectively detect the diseases. In this paper, vgg16, inception and xception models are used. Vgg16, inception and xception models have achieved 99.22%, 88.48% and 93.92% validation accuracies when the epoch value is set to 10. Evaluation of models has also been done using accuracy, recall, precision, and confusion matrix.

• The Plant Pathology Journal
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• v.24 no.3
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• pp.337-351
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• 2008

Host-pathogen interaction in rice bacterial blight pathosystem was analyzed for a better understanding of their relationship and recognition of stable pathogenicity among the populations of Xanthomonas oryzae pv. oryzae. A total number of 52 bacterial strains isolated from diseased leaf samples collected from 12 rice growing states and one Union Territory of India, were inoculated on 16 rice varieties, each possessing known genes for resistance. Analysis of variance revealed that the host genotypes(G) accounted for largest(78.4%) proportion of the total sum of squares(SS), followed by 16.5% due to the pathogen isolates(I) and 5.1% due to the $I{\times}G$ interactions. Application of the Additive Main effects and Multiplicative Interaction(AMMI) model revealed that the first two interaction principal component axes(IPCA) accounted for 66.8% and 21.5% of the interaction SS, respectively. The biplot generated using the isolate and genotypic scores of the first two IPCAs revealed groups of host genotypes and pathogen isolates falling into four sectors. A group of five isolates with high virulence, high absolute IPCA-1 scores, moderate IPCA-2 scores, low AMMI stability index '$D_i$' values and minimal deviations from additive main effects displayed in AMMI biplot as well as response plot, were identified as possessing stable pathogenicity across 16 host genotypes. The largest group of 27 isolates with low virulence, small IPCA-1 as well as IPCA-2 scores, low $D_i$ values and minimal deviations from additive main effect predictions, possessed stable pathogenicity for low virulence. The AMMI analysis and biplot display facilitated in a better understanding of the host-pathogen interaction, adaptability of pathogen isolates to specific host genotypes, identification of isolates showing stable pathogenicity and most discriminating host genotypes, which could be useful in location specific breeding programs aiming at deployment of resistant host genotypes in bacterial blight disease control strategies.

• Journal of Ginseng Research
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• v.5 no.1
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• pp.73-84
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• 1981

Effect of environmental factors and host on the growth and outbreak of various ginseng diseases was reviewed Environmental lectors included hydrogen ion concentration, moisture content, temperature, nutrition, and microbiol populations. Age of the ginseng plants in relation to several ginseng disease occurrence was also included in order to formulate the effective control measure for ginseng diseases. Damping-off caused by Rhizoctonia, Pythium, and Phytophthora, greymold by Botrytis, sclerotinia by Scleretinia, and phytophthora blight caused by Phytophthora were usually prevalent during the early growing season of ginseng when temperature is below 20$^{\circ}C$, while anthrac se caused by Colletotrichum, alternaria blight by Alternaria, and bacterial soft rot by Erwinia were so during the latter growing season when temperature is above 25$^{\circ}C$. However, the root rot incited by Fnarium and Cylindrocarpon caused severe damages throughout the growing season. Growth range of the temperature for a pathogen was highly related to the corresponding disease outbreak. Hydrogen ion concentration was highly related to the outbreak of sclerotinia, root rot, and red rot. Most severe outbreak of those diseases where the soil acidity was pH 4.7, pH 6.5- 7.5, and pH6.0-6.5, respectively. Nitrogen content in the soil was also related to outbreak of root rot and red rot. More red rot occurred where NH,-nitrogen is above 30 ppm and more root rot obtained when excessive nitrogen fertilizer applied. Yellow necrosis apparently was related to magnesium especially its ratio with potassium or calcium content in a soil. Fusarium Population showed significant .relations to missing rate of ginseng Plants in a Implanting ginseng field, while that of total bacteria showed similar relations in all ginseng field, However, in six year old ginseng fields, the more the Streptomyces population was, the less the Fusarium obtained. Consequently, less missing rate observed in a field where Streptomyces population was high. Damping-off, root rot, Rhytophthor a blight were mose severe on the nursery and on 2-3 years old ginseng plants, whereas sclerotinia, and grey cod, alteraria blight, anthracnose were severe on 4-6 years old ginseng plants. Root rot caused by Fusarium and Erwinia, however, was also severe regardless of the age of the plants when the roots were injured. Therefore, for the effective control of ginseng root rot most careful control of the disease during the early year should be rendered.

• KOREAN JOURNAL OF CROP SCIENCE
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• v.52 no.2
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• pp.162-168
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• 2007

Compatible and incompatible interactions of near-isogenic lines containing one of Xa1, Xa3, and Xa7 resistance genes with Japanese bacterial blight isolates (T7174, T7147, and T7133) were examined in order to determine the variation of bacterial blight resistance and the stability of resistance gene. IRBB 101 line having a Xal gene was compatible (host susceptible) with T7147 and T7133 isolates but incompatible (host resistant) with T7174 isolate at all the tested rice growth stages. IRBB 103 line having a Xa3 gene was susceptible or moderately resistant to the three isolates at seedling and maximum tillering stage but resistant at heading stage. IRBB 101 line having a Xa7 gene was semi-compatible with the three isolates at seedling stage but incompatible at the other growth stages. Overall there were clear differences between compatible and incompatible interactions of rice with Xanthomonas oryzae pv. oryzae races. In the mixed inoculations of compatible and incompatible isolates, the lesion length from near-isogenic lines decreased as the ratios of incompatible races increased. When the distinction between compatible and incompatible isolates was unclear, there was almost no variation of lesion length regardless of mixed ratios. The pathogenicity of the mixed races in the incompatible Interactions increased rather than the individual inoculation whereas the lesion length of compatible interactions was similar to that of the individual inoculation. These data indicate the incompatible races inhibit the virulence of a compatible race but compatible races increase the disease occurrence due to incompatible races. Furthermore, IRBB 107 line that showed resistance to all the isolates at all the tested growth stages was considered as a good parent f3r breeding of resistant variety.

• Research in Plant Disease
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• v.29 no.4
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• pp.405-413
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• 2023

Bacterial blight of carrot caused by Xanthomonas hortorum pv. carotae (Xhc) is one of the serious diseases of carrot, of which control measures has not been still established in the domestic farm. In this study, in order to select effective sterilizer for bacterial blight of carrots, three antibiotics such as streptomycin, oxolinic acid, kasugamycin, two copper compounds like copper hydroxide and copper sulfate basic and three rhizobacteria Burkholderia gladioli MRL408-3, Pseudomonas fluorescens TRH415-2 and Bacillus cereus KRY505-3 were selected to investigate their direct antibacterial effects using artificial media, aiming to identify effective pesticides against Xhc. Among them, treated medium with antibiotics such as streptomycin, oxolinic acid, and the antagonistic rhizobacteria MRL408-3 were formed inhibition zone. The agrochemicals and the rhizobacteria MRL408-3, which showed antibacterial effects on carrot leaves, pre-treated on the carrot leaves and then inoculated with Xhc. High control effects were shown on the carrot leaves pre-treated with both streptomycin and oxolinic acid. Scanning electron microscopy images of the carrot leaf surfaces showed that the population of bacteria decreased significantly on leaves pre-treated with streptomycin and oxolinic acid. From these results, it can be inferred that antibiotics like streptomycin and oxolinic acid exhibit superior control effects compared to other agents. This study provides valuable insights towards establishing an effective control system for bacterial blight of carrot.

• Research in Plant Disease
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• v.28 no.3
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• pp.152-161
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• 2022

Several types of chemical bactericides have been used to control fire blight. However, their excessive usage leads to environmental deterioration. Therefore, several researchers have analyzed antagonistic microorganisms as promising, effective, and safe biological control agents (BCAs). The primary aim of this study was to screen for potential antagonistic bacteria that suppress Erwinia amylovora. Among the 45 isolates studied, 5 strains showed the largest inhibition zone against E. amylovora. 16S rRNA gene sequencing identified them as Bacillus amyloliquefaciens (KPB 15), B. stratosphericus (KPB 21), B. altitudinis (KPB 25), B. safensis (KPB 31), and B. subtilis (KPB 39). KPB 25 and 31 reduced the lesion size of fire blight by 50% in immature apple fruits, and did not show antagonism against each other. Therefore, KPB 25 and 31 were selected to develop an antagonistic mixture against fire blight. Although the mixture with KPB 25 and 31 showed a slightly increased ability to reduce lesion size on immature fruits, they did not exhibit a synergistic effect in reducing E. amylovora population compared to each strain alone. Nevertheless, we have identified these two strains as useful and novel BCAs against fire blight with additional benefits safety and potential in developing a mixture without loss of their activity, owing to the absence of antagonism against each other.