• Title/Summary/Keyword: Artificial Breeding

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New Sources of Resistance and Identification of DNA Marker Loci for Sheath Blight Disease Caused by Rhizoctonia solani Kuhn, in Rice

  • Pachai, Poonguzhali;Ashish, Chauhan;Abinash, Kar;Shivaji, Lavale;Spurthi N., Nayak;S.K., Prashanthi
    • The Plant Pathology Journal
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    • v.38 no.6
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    • pp.572-582
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    • 2022
  • Sheath blight disease caused by the necrotrophic, soilborne pathogen Rhizoctonia solani Kuhn, is the global threat to rice production. Lack of reliable stable resistance sources in rice germplasm pool for sheath blight has made resistance breeding a very difficult task. In the current study, 101 rice landraces were screened against R. solani under artificial epiphytotics and identified six moderately resistant landraces, Jigguvaratiga, Honasu, Jeer Sali, Jeeraga-2, BiliKagga, and Medini Sannabatta with relative lesion height (RLH) range of 21-30%. Landrace Jigguvaratiga with consistent and better level of resistance (21% RLH) than resistant check Tetep (RLH 28%) was used to develop mapping population. DNA markers associated with ShB resistance were identified in F2 mapping population developed from Jigguvaratiga × BPT5204 (susceptible variety) using bulk segregant analysis. Among 56 parental polymorphic markers, RM5556, RM6208, and RM7 were polymorphic between the bulks. Single marker analysis indicated the significant association of ShB with RM5556 and RM6208 with phenotypic variance (R2) of 28.29 and 20.06%, respectively. Co-segregation analysis confirmed the strong association of RM5556 and RM6208 located on chromosome 8 for ShB trait. This is the first report on association of RM6208 marker for ShB resistance. In silico analysis revealed that RM6208 loci resides the stearoyl ACP desaturases protein, which is involved in defense mechanism against plant pathogens. RM5556 loci resides a protein, with unknown function. The putative candidate genes or quantitative trait locus harbouring at the marker interval of RM5556 and RM6208 can be further used to develop ShB resistant varieties using molecular breeding approaches.

Influence of Artificial Rainfall on Wheat Grain Quality During Ripening by Using the Speed-breeding System (세대단축시스템을 이용한 국내 밀 품종의 등숙기 강우에 의한 품질변이 평가)

  • Hyeonjin Park;Jin-Kyung Cha;So-Myeong Lee;Youngho Kwon;Jisu Choi;Ki-Won Oh;Jong-Hee Lee
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.68 no.3
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    • pp.188-196
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    • 2023
  • Wheat (Triticum aestivum L.) is an important crop in Korea, with a per capita consumption of 31.6 kg in 2019. In the southern region, wheat is grown after paddy rice, and it is harvested during the rainy season in mid-June. This timing, in combination with high humidity and untimely rainfall, activates the enzyme alpha-amylase, which breaks down starch in the wheat grains. As a result, sprouted grains have lower quality and value for flour. However, seeds that absorb water before sprouting are expected to maintain better quality. The aim of the study was to identify the critical period during wheat maturation when rainfall has the greatest impact on grain quality, to prevent price declines due to quality deterioration. Two wheat cultivars, Jokyoung and Hwanggeumal, were grown in a speed breeding room, and artificial rainfall was applied at different times after heading (30, 35, 40, 45, 50, and 55 days). The proportion of vitreous grains decreased from 40 to 55 days after heading (DAH). Both cultivars had chalky grain sections from 35 DAH, with Hwanggeumal having a higher proportion of vitreous grains. Starch degradation was observed using FE-SEM (Field Emission Scanning Electron Microscope) at 40 DAH for Jokyoung and 50 DAH for Hwanggeumal. Color measurements indicated increased L and E values from 40 DAH, with rain treatment at 55 DAH leading to a significant increase in L values for both cultivars. Ash content increased at 45 DAH, whereas SDSS decreased at 35 DAH. Overall, grain quality from 40 DAH until harvest was found to be affected to the greatest extent by direct exposure of the spikes to moisture. Red wheat showed better quality than white wheat. These findings have implications for the cultivation of high-quality wheat and can guide future research efforts in this area.

Spawning Volumes and Times of Blue Devil Pomacentrus caeruleus (파랑점자돔, Pomacentrus caeruleus의 산란주기 및 산란량)

  • Jung, Min-Min;Oh, Bong-Sae;Kim, Sam-Yeon;Lee, Chang-Hoon;Yang, Moon-Ho;Han, Seok-Jung;Rho, Sum;Kim, Hyeung-Sin
    • Korean Journal of Ichthyology
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    • v.22 no.2
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    • pp.90-95
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    • 2010
  • Blue devil (Pomacentrus caeruleus, also called Chrysiptera cyanea) is widespread in the Indo-Pacific Ocean and very popular all over the world as an aquarium fish because it is so easy to keep in a marine aquarium. However, tank-breeding techniques are not completely known. In this study, we reared blue devil and investigated its spawning ecology, as a necessary precursor for successful artificial-tank breeding. We investigated the spawning volume according to time with two types of calendars: solar and lunar. Rearing conditions were set at 30 ppt salinity, $27^{\circ}C$ water temperature, in two aquariums with water volumes of 80 and 125 L. We successfully bred P. caeruleus in this artificial-tank system. The aquarium fish formed a spawning harem with one male and more than two females. We harvested about 113,580 eggs in 44 spawning episodes by two spawning harems during the 11-month period from December to October. They showed a peak season of spawning volume and time in May and June. We confirmed the two peak points in spawning volumes and times, which coincided with the first quarter and last (third) quarter of the lunar phases of the moon.

A Study on Habitat for Multiplication of Wild-birds in Urban Woodland (도시공원내 야생조류의 유치증식을 위한 서식지에 관한 조사)

  • 이성규;김종갑;민희규
    • The Korean Journal of Ecology
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    • v.25 no.5
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    • pp.283-295
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    • 2002
  • The number of species and individvals of birds observed in Bibong, Chinju-castle, Nosan and Saho parks were 49 and 4,349, 46 and 6,453, 37 and 2,817, and 33 and 6,014, nespectively The dominant species in all survey areas were shown in the order of Passer montanus(21.8%), Aegithalos spp.(20.7%), Pica pica(8.7%), Hypsipetes amaurotis(7.6%), Parus major(6.4%), Carduelis spp.(4.6%). Migration of birds was the order of residents, summer visitor, winter visitor, and passage migrant. The number of bird species appeared was the fewest in winter as 40 species and the most in spring as 53 species. Species diversity was the highest in Bibong park as 1.3256 and followed in the order of Sanho park, Nosan park, and Chinju-castle park. The nesting guild was higher at outside and artificial nesting guild(7-15 species) compared with hole, canopy, bush nesting guild(1-7 species) in all survey areas. The breeding forage guild was higher at canopy and bush(12-25 species) than that at outside, artificial, and air forage guild(2-8 species).

Varietal characteristics of new Cordyceps militaris 'Dowonhongcho 2ho' improved by mating type molecular markers (교배형 분자마커를 이용한 신품종 밀리타리스 동충하초 '도원홍초 2호'의 품종 특성)

  • Lee, Byung-joo;Lee, Mi-Ae;Kim, Yong-Gyun;Lee, Sun-Gye;Choi, Young-sang;Lee, Byung-eui
    • Journal of Mushroom
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    • v.15 no.3
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    • pp.111-117
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    • 2017
  • The mushroom species Cordyceps militaris has been studied and cultivated as a medicinal mushroom due to its multiple valuable biological and pharmaceutical activities. For breeding new strains of C. militaris, multiplex PCR assays were performed using primers specific for its mating type genes, MAT1-1 and MAT1-2. Mating types and mating status were confirmed, as evidenced by DNA bands at 233-bp and 191-bp for MAT1-1 and MAT1-2 respectively. The novel 'Dowonhongcho 2ho' was developed through mating; they were found to possess high-quality fruiting bodies when grown in artificial media. The stromata of the new strain were club-shaped, with a bright orange-red color, and measured 7.1 cm in length. They had an average cordycepin content of 0.33%. Compared to 'Dowonhongcho,' the new strain had a 7% higher yield, as well as firm fruiting bodies. The optimum temperature for mycelial growth was $20{\sim}25^{\circ}C$, and the optimum temperature for stroma development was $18{\sim}22^{\circ}C$. The fruiting bodies developed after 49.1 days from inoculation. The use of mating type molecular markers improved the breeding efficiency of the new strain 'Dowonhongcho 2ho.' Thus, they may be valuable for artificial cultivation and industrial-scale production of C. militaris with excellent characteristics.

Whole genome sequencing of Luxi Black Head sheep for screening selection signatures associated with important traits

  • Liu, Zhaohua;Tan, Xiuwen;Wang, Jianying;Jin, Qing;Meng, Xianfeng;Cai, Zhongfeng;Cui, Xukui;Wang, Ke
    • Animal Bioscience
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    • v.35 no.9
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    • pp.1340-1350
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    • 2022
  • Objective: Luxi Black Head sheep (LBH) is the first crossbreed specialized for meat production and was developed by crossbreeding Black Head Dorper sheep (DP) and Small Tailed Han sheep (STH) in the farming areas of northern China. Research on the genomic variations and selection signatures of LBH caused by continuous artificial selection is of great significance for identifying the genetic mechanisms of important traits of sheep and for the continuous breeding of LBH. Methods: We explored the genetic relationships of LBH, DP, and several Mongolian sheep breeds by constructing phylogenetic tree, principal component analysis and linkage disequilibrium analysis. In addition, we analysed 29 whole genomes of sheep. The genome-wide selection signatures have been scanned with four methods: heterozygosity (HP), fixation index (FST), cross-population extended haplotype homozygosity (XP-EHH) and the nucleotide diversity (𝜃π) ratio. Results: The genetic relationships analysis showed that LBH appeared to be an independent cluster closer to DP. The candidate signatures of positive selection in sheep genome revealed candidate genes for developmental process (HoxA gene cluster, BCL2L11, TSHR), immunity (CXCL6, CXCL1, SKAP2, PTK6, MST1R), growth (PDGFD, FGF18, SRF, SOCS2), and reproduction (BCAS3, TRIM24, ASTL, FNDC3A). Moreover, two signalling pathways closely related to reproduction, the thyroid hormone signalling pathway and the oxytocin signalling pathway, were detected. Conclusion: The selective sweep analysis of LBH genome revealed candidate genes and signalling pathways associated with developmental process, immunity, growth, and reproduction. Our findings provide a valuable resource for sheep breeding and insight into the mechanisms of artificial selection.

Nest Characteristics of the Chinese Egret (Egretta europhotes) in South Korea (한국에서 번식하는 노랑부리백로 Egretta europhotes의 둥지 특성)

  • Kang, Jung-Hoon;Kim, In-Kyu;Lee, Hansoo;Kim, Dal-Ho;Rhim, Shin-Jae;Lee, Joon-Woo
    • Korean Journal of Environment and Ecology
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    • v.29 no.6
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    • pp.850-857
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    • 2015
  • This study was aimed to identify the characteristics of nest and breeding site conditions of Chinese Egret (Egretta europhotes) that breed in the uninhabited islets of the western coast of South Korea. It is expected that the information collected through this study can contribute to providing basic information required when building and managing artificial nests in their natural breeding habitats. Chinese Egrets make their nests in the shrub layers of Long Leaf Elaeagnus (Elaeagnus macrophylla), Arrow Bamboo (Pseudosasa japonica), and Baby Brier (Rosa multiflora). A total of 50 breeding nests of Chinese Egret were investigated in June and July 2013, with area-wise distribution as follows: Seomando (11 nests), Hwangseodo (14 nests), Mokdo (10 nests), and Napdaekiseom (15 nests). Vegetation coverage (cover, %), height from the ground to the top (height, cm), thickness from top to bottom of the nest (thickness, cm), reuse period, major axis (cm), minor axis (cm), and depth (cm) of each nest were measured. According to the results of the study on the nest characteristics of 4 breeding groups, the nests in Hwangseodo had the highest coverage, the nests in Mokdo were built in the highest places, the nests in Napdaekiseom showed the longest reuse period, and the nests in Mokdo had the greatest depth. The differences in height and reuse period were significant between Mokdo and Napdaekiseom. Moreover, there were significant differences in reuse period and depth between Seomando and Hwangseodo. There were significant differences in cover, minor axis, and depth between breeding groups that built nests on Arrow Bamboo (Mokdo and Napdaekiseom) and Baby Brier (Seomando and Hwangseodo). Nest characteristics of Chinese Egret were generally similar, while some variables showed different values for different breeding groups.

Synchronization of Estrus in Thoroughbred Mares (더러브렛종 암말의 발정 동기화)

  • Son, D.S.;Lee, C.S.;Seo, J.H.;Ko, J.H.;Cho, C.Y.;Choe, C.Y.;Choi, S.H.;Kim, H.J.;Hur, T.Y.;Suh, G.H.;Ryu, I.S.;Kim, M.C.;Choe, S.Y.
    • Journal of Embryo Transfer
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    • v.22 no.1
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    • pp.47-51
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    • 2007
  • The objective of this study was to improve the reproductive ability of Thoroughbred mares with artificial estrous regulation by hormone treatments and artificial illumination. The results were as follows; Estrous detection in cycling mares which were treated $PGF_2{\alpha}$ or altrenogest administration was all 100%, and pregnancy rates were 95.2% and 71.4%, respectively. Estrous detection was 100% within March when altrenogest was administered alone or together with estradiol for non-pregnant mares in the previous year. Interval to estrous detection after altrenogest administration was 4.3 days in single administration of altrenogest and 3.7 days in combined administrations of altrenogest and estradiol, respectively Interval to ovulation after estrous detection were 2.7 and 2.5days, respectively. Pregnancy rate following single altrenogest administration was 80.0%. Estrous detection and pregnancy rates by artificial illumination in non-pregnant mares were 92.9% and 46.9%, respectively. These results show that estrous synchronization of mares during breeding season will be able to improve the pregnancy rate, and altrenogest administration in non-pregnant mares in the previous year will be able to induce early reproduction and improve pregnancy rate In racing horses.

Failure of Reproduction Management in an Inbreeding English Bulldog (근친교배 잉글리쉬 불독에서 번식 관리의 실패)

  • Kim, Min-Jung;Park, Sol-Ji;Kim, Geon-A;Park, Eun-Jung;Moon, Joon-Ho;Choi, Ji-Yei;Choi, Woo-Jae;Lee, Byeong-Chun;Jang, Goo
    • Journal of Veterinary Clinics
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    • v.30 no.5
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    • pp.384-386
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    • 2013
  • A two-year-old, female English bulldog was referred for breeding by artificial insemination with frozen semen of male English bulldog, a litter of female bulldog's grandfather. Intrauterine artificial insemination was done two days after the ovulation day. Sperm was evaluated after thawing by computer assisted sperm analyzer, and its motility was 89.8% with normal shape. Pregnancy bearing eight fetuses was diagnosed by ultrasonography and radiography. Cesarean section was performed sixty days after the artificial insemination. Eight pups were delivered with safe, but the entire pup had abnormalities including severe bow-legged malformations, cleft lip, cleft palate, and enlarged cranial part.

Implementation of unmanned cow estrus detection system for improving impregnation rate (번식률 향상을 위한 무인 발정발현 관찰시스템 구현)

  • Kim, Suc-June;Jee, Sun-Ho;Cho, Hyun-Chan;Kim, Chun-Su;Kim, Hyeon-Shup
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.16 no.9
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    • pp.6236-6246
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    • 2015
  • In the paper, we reduce non-pregnant conditions and improve impregnation rate by unmanned estrus detection and decide proper time for artificial insemination. It is too hard to detect estrus only by using activities, we develop unmanned estrus detection system that consist of RF activity sensors, cow management program and estrus detection algorithm that uses information of activities and breeding. We verify performance by experiments in four similar scale stockbreeding farmhouse. Each stockbreeding farmhouse breeds 87, 81, 93, 82 cows and expected estrus cows are 14, 19, 15, 17. In expected estrus cow, we fail in weak estrus detection - 3, 2, 1, 3 cows, but detect successfully normal estrus - 11, 17, 14, 14 cows. After artificial insemination, 10, 17, 13, 14 cows became pregnant successfully confirming that proposed unmanned estrus detection system is effective for deciding proper time for artificial insemination in normal estrus.