• Title/Summary/Keyword: 3DD

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Development of Meloidogyne arenaria on Oriental Melon (Cucumis melo L.) in Relation to Degree-day Accumulation Under Greenhouse Conditions

  • Kim, Dong-Geun;Yeon, Il-Kwon
    • The Plant Pathology Journal
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    • v.17 no.3
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    • pp.159-163
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    • 2001
  • Influence of soil temperature [accumulated degree-day for the base temperature $5^{\circ}$($\textrm{DD}_5$)] on the development of Meloidogyne arenaria were studied in a winter grown oriental melon greenhouse in Seongju, Korea. Egg masses were first observed on roots at the accumulation of 565 $\textrm{DD}_5$(40 days after transplanting), suggesting that the nematode has completed the first generation in 40 days. Second-stage juveniles (J2) densities were lowest at 863 $\textrm{DD}_5$ in April, first increased at 1,334 $\textrm{DD}_5$ in May, peaked at 2,951 $\textrm{DD}_5$ in July, and decliner thereafter. Development of egg masses and J2 density in soil revealed that M. arenaria could develop in 7-8 generations in a year in the greenhouse. Degree-day monitoring, therefore, could aid to predict nematode development in soil and can be valuable tool a to develop root-knot nematode control strategies.

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Optimal filter materials for protist quantification via droplet digital PCR

  • Juhee Min;Kwang Young Kim
    • ALGAE
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    • v.39 no.1
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    • pp.51-56
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    • 2024
  • The use of droplet digital polymerase chain reaction (ddPCR) has greatly improved the quantification of harmful protists, outperforming traditional methods like quantitative PCR. Notably, ddPCR provides enhanced consistency and reproducibility at it resists PCR inhibitors commonly found in environmental DNA samples. This study aimed to determine the most effective filter material for ddPCR protocols by assessing the reproducibility of species-specific gene copy numbers and filtration time across six filter types: cellulose acetate (CA), mixed cellulose ester (MCE), nylon (NY), polycarbonate (PC), polyethersulfone (PES), and polyvinylidene fluoride (PVDF). The study used two species of Chattonella marina complexes as a case study. Filtration rates were slower for NY, PC, and PVDF filters. Moreover, MCE, NY, PES, and PVDF yielded lower DNA amounts than other filters. Importantly, the CA filter exhibited the lowest variance (38-39%) and the highest determination coefficients (R2 = 0.92-0.96), indicating superior performance. These findings suggest that the CA filter is the most suitable for ddPCR quantification of marine protists, offering quick filtration and reliable reproducibility.

A novel WD40 protein, BnSWD1, is involved in salt stress in Brassica napus

  • Lee, Sang-Hun;Lee, Jun-Hee;Paek, Kyung-Hee;Kwon, Suk-Yoon;Cho, Hye-Sun;Kim, Shin-Je;Park, Jeong-Mee
    • Plant Biotechnology Reports
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    • v.4 no.2
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    • pp.165-172
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    • 2010
  • Genes that are expressed early in specific response to high salinity conditions were isolated from rapeseed plant (Brassica napus L.) using an mRNA differential display method. Five PCR fragments (DD1.5) were isolated that were induced by, but showed different response kinetics to, 200 mM NaCl. Nucleotide sequence analysis and homology search revealed that the deduced amino sequences of three of the five cDNA fragments showed considerable similarity to those of ${\beta}$-mannosidase (DD1), tomato Pti-6 proteins (DD5), and the tobacco harpin-induced protein hin1 (DD4), respectively. In contrast, the remaining clones, DD3 and DD2, did not correspond to any substantial existing annotation. Using the DD3 fragment as a probe, we isolated a full-length cDNA clone from the cDNA library, which we termed BnSWD1 (Brassica napus salt responsive WD40 1). The predicted amino-acid sequence of BnSWD1 contains eight WD40 repeats and is conserved in all eukaryotes. Notably, the BnSWD1 gene is expressed at high levels under salt-stress conditions. Furthermore, we found that BnSWD1 was upregulated after treatment with abscisic acid, salicylic acid, and methyl jasmonate. Our study suggests that BnSWD1, which is a novel WD40 repeat-containing protein, has a function in salt-stress responses in plants, possibly via abscisic acid-dependent and/or -independent signaling pathways.

Performance of CEFSK Systems in Nonlinear Channel Environments (비선형 채널 환경에서 CEFSK 시스템의 성능)

  • Lee, Kee-Hoon;Choi, Byeong-Woo;Shin, Kwan-Ho;Seo, Jong-Soo
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.38A no.1
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    • pp.79-87
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    • 2013
  • A new modulation technique - correlative encoded FSK (CEFSK) - for use in power and bandwidth limited digital communication system is proposed. CEFSK is free of ISI and generates output signals which have a smooth and continuous phase transition and a reduced envelope fluctuation by keeping correlation between amplitude and phases of two subsequent symbols. In comparison to conventional one-bit differential detected (1DD) GFSK, the performance of the 1DD-CEFSK in a non-linearly amplified (NLA) channel impaired by additive white Gaussian noise (AWGN), ISI and IM, is analyzed via computer simulation. The simulation result shows that, in an NLA single-channel, 1DD-CEFSK provides a signal-to-noise ratio (SNR) advantage of up to 1.2dB and 0.8dB at BER of $1{\times}10^{-4}$ when input back-off (IBO) of HPA is -1.0dB and -3.0dB, respectively. For the same channel environment with multi-channel, 1DD-CEFSK outperforms 1DD-GFSK by 1.1dB in SNR, regardless of the value of IBO.

The Effect of Temperature on the Development of Spodoptera frugiperda (Lepidoptera: Noctuidae) (열대거세미나방 발육에 미치는 온도의 영향)

  • Moon, Hyung Cheol;Choi, Min Kyung;Jang, Su Ji;Lee, Jang Ho;Kim, Ju Hee;Chon, Hyong Gwon
    • Korean journal of applied entomology
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    • v.61 no.2
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    • pp.349-356
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    • 2022
  • Fall armyworm, Spodoptera frugiperda, is a invasive migratory pest of native to the tropical and sub-tropical regions that has recently invaded Korea with damage to cornfield. The study was conducted to investigate the development periods of S. frugiperda on artificial diet at six different temperatures. The developmental period from eggs to adult at 18, 21, 24, 27, 30 and 32℃ was 79.8, 54.2, 34.3, 28.4, 24.6 and 24.0 days, respectivery and decreased with increasing temperature. The pupal periods of females were shorter than males. Most of the larvae developed through six instar, but the ratio of 7 or more instar increased at low temperatures. The relationship between the development rate and temperature was fitted with by linear regression analysis. The lower development threshold for egg and larva development was 12.9℃ and 11.3℃, respectively, 12.6℃ for pupae and 11.8℃ for egg-to-adult development. The effective accumulative temperature for the development of the respective life cycle stages were 37.0 DD for eggs, 286.3 DD for larvae, 132.2 DD for pupae and 456.8 DD egg-to-adult development.

Effects of Dioscorea daemona Roxb. Stem Extract on the Inflammatory Responses, Antioxidant System and Lipid Levels in Vivo and the Production of Inflammatory Mediators in RAW264.7 Cells (Dioscorea daemona Roxb. (Stem) 추출물이 Rat의 염증반응 및 항산화 체계에 미치는 영향과 RAW264.7 세포주의 염증성 매개물 생성에 미치는 영향)

  • Choi Eun-Mi;Koo Sung-Ja
    • Journal of the East Asian Society of Dietary Life
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    • v.15 no.6
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    • pp.707-716
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    • 2005
  • 본 연구에서는 다양한 동물 모델을 사용하여 Dioscorea daemona Roxb. 줄기 메탄을 추출물(DD)의 항염증 활성을 측정하였으며 DD가 생체내에서 항산화 체계의 변화를 유도할 수 있는지도 살펴보았다. DD를 200mg/kg용량으로 3주간 경구투여하였을 때 동물실험모델에서 항염증 및 type IV 알레르기 억제 효과를 나타내었으며 혈청의 Catalase 활성, 지질 과산화, TG 및 HDL cholesterol 수치가 영향을 받았다. DD와 이를 클로로포름과 부탄올로 순차적으로 분획하여 얻은 fraction이 lipopolysaccharide(LPS)로 유도한 RAW264.7 대식세포주의 nitric oxide(NO), prostaglandin $E_2(PGE_2)$, tumor necrosis $factor-\alpha(TNF-\alpha)$, interleukin 6(IL6)의 생성을 억제하는지도 연구하였다. DD와 그 분획물들은 $4\~100{\mu}g/mL$ 농도에서 세포 독성을 나타내지 않고 LPS가 유도한 RAW264.7 세포주의 NO, $TNF-\alpha$, IL-6 생성을 억제하였다. LPS가 유도한 $PGE_2$ 생성은 DD의 클로로포름 분획에서 유의적으로 감소하였다(p<0.05). 따라서 Dioscorea daemona 추출물은 대식세포의 염증성 매개물의 억제를 통하여 항염증 활성을 나타내는 것으로 사료된다.

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Novel Synthesis of Sulfated Chitosan Derivatives and its Anti-HIV-1 Activity (황산화 키토산 유도체의 합성과 항에이즈활성)

  • Han Sang-Mun
    • Journal of environmental and Sanitary engineering
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    • v.21 no.1 s.59
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    • pp.21-34
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    • 2006
  • To investigate anti-HIV-1 activity of water soluble chitosans, sulfated chitosan derivatives were prepared in mild condition. Various sulfated chitosan derivatives (N-3,6-O-S-chitosan, N-desulfated 3,6-O-S-chitosan, 3,6-O-S-chitin, and 3,6-O-sulfated-N-(o-carboxybenzoyl) chitosan) were synthesized with sulfurtrioxidepyridene complex in pyridine solvent. Characterization of the sulfated chitosan derivatives was carried out by $^{13}C$ NMR and IR spectroscopies. To observe ionic reaction properties, pKas of the sulfated chitosan derivatives and chitosan of low molecular weight were estimated by potentiometric titration. The sulfated chitosan derivatives had high water solubility, pKas (pKa : 7.7) of N-3,6-O-S-chitosan and N-desulfated 3,6-O-S-chitosan were increased than pKa of water insoluble chitosan (pKa : 6.2), These results suggest the participation of electrostatic interaction of amino and sulfate groups on the sulfated chitosans. Anti-HIV-1 drugs, such as AZT, ddC, and ddI for anti-HIV activity had higher selective index compared with SCB-chitosan but N-3,6-O-S-chitosan has shown higher selective index compared with ddC and ddI as HIV drugs.. These results suggest that sulfated chitosan derivatives were expected as an anti-HIV drug with differential driving force mechanism against some nucleoside analogs drug in the future.

Temperature-dependant development and seasonal occurrence of Cabbage armyworm (Mamestra brassicae L.) at Highland Chinese cabbage fields (도둑나방 (Mamestra brassicae L.)의 온도별 발육 특성과 고랭지배추 재배포장에서의 발생소장)

  • Kwon, Min;Kwon, Hye-Jin;Lee, Seung-Hwan
    • Korean journal of applied entomology
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    • v.44 no.3 s.140
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    • pp.225-230
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    • 2005
  • This study was conducted to investigate the developmental characteristics of cabbage armyworm, Mamestra brassicae L. (Lepidoptera: Noctuidae) by different temperatures and its seasonal occurrence in pepper field. Under four constant temperatures, 15, 20, 22 and $25^{\circ}C$, developmental periods from egg to adult were 88.3, 63.0, 52.3, and 42.8 days, respectively, with egg periods being 9.2, 6.2, 5.0 and 3.9 days, and larval periods being 40.5, 30.1, 23.3 and 21.2 days, respectively. Developmental threshold and thermal requirement in degree-days (DD) were $7.9^{\circ}C$ and 69.4 DD for egg, $4.8^{\circ}C$ and 434.8 DD for larva and $6.7^{\circ}C$ and 344.8 DD for pupa. Fecundity of female increased as temperature increased laying 1262.1 eggs at $15^{\circ}C$, 1663.8 eggs at $20^{\circ}C$ and 1763.2 eggs at $25^{\circ}C$. Mean numbers of eggs per egg-mass were 99.4, 114.7 and 167.9 under the three constant temperatures, respectively. In Daegwallyeong highland area, this noctuid occurred from mid June to late August and has two generations a year reaching peak two times, one at late June and the other at early August.

Comparison of Aerobic and Anaerobic Capacity between Sasang Consititutions and ACE Gene Polymorphismn (사상체질과 ACE 유전자 다형성 분류에 따른 유·무산소성 능력비교)

  • Seck, Dong-Sun;Park, Kyu-Jung
    • Journal of Korean Clinical Health Science
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    • v.3 no.2
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    • pp.340-353
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    • 2015
  • Purpose. This study of purpose was to to compare of Aerobic and Anaerobic Capacity between Sasang Constitutions and ACE Gene Polymorphism. Methods. 24 healthy males were participated in this experiment who were in their twenties and had no disease, then they were divided by ACE type and by Sasang constitutions with QSCC II. According to these group, the body compositon, Aerobic capacity including VO2max, Anaerobic Capacity were measured. Results. In this study, According to ACE type, ID type were 8, II were 8 and DD type were 8 persons. According to ACE type, there were significant difference among type, especially, II, ID type more than DD. II type is more higher than any type and DD type is lower in the ratio of Blood Lactic recovery. DD type was more excellent than other type in Anaerobic power. According to Sasang Constitutions, there were 8 SoYang, 5 Taeum, 11 Soeum and then no TaeYang constitution. In Aerobic capacity, Taeum constitution had significantly high means and Anaerobic threshold. In the ratio of Blood lactic recovery, Taeum constitution was excellent and SoYang had poor recovery capacity. SoYang had more excellent than other constitution significantly in Anaerobic capacity. Comparing ACE type with Sasang constitution, Soyang constitution included 4 ID types, Taeum inclued 2 II types and 2 ID types then Soeum included 6 DD types. Compared of Aerobic and Anaerobic capacity between Sasang constitutions and ACE type, Soyang constitutions were similar to ID type, Taeum similar to II type and ID type and then Soeum were DD type. Conclusions. This study had made it clear that there were similar feature between ACE type and Sasang constitutions. Also it's possible to predict the Aerobic capacity that may be foreseen by ACE type with Sasang questionnaire method but not Anaerobic capacity.

Dietary Diversity during Early Infancy Increases Microbial Diversity and Prevents Egg Allergy in High-Risk Infants

  • Bo Ra Lee;Hye-In Jung;Su Kyung Kim;Mijeong Kwon;Hyunmi Kim;Minyoung Jung;Yechan Kyung;Byung Eui Kim;Suk-Joo Choi;Soo-Young Oh;Sun-Young Baek;Seonwoo Kim;Jaewoong Bae;Kangmo Ahn;Jihyun Kim
    • IMMUNE NETWORK
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    • v.22 no.2
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    • pp.17.1-17.14
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    • 2022
  • We aimed to investigate associations of dietary diversity (DD) with gut microbial diversity and the development of hen's egg allergy (HEA) in infants. We enrolled 68 infants in a high-risk group and 32 infants in a control group based on a family history of allergic diseases. All infants were followed from birth until 12 months of age. We collected infant feeding data, and DD was defined using 3 measures: the World Health Organization definition of minimum DD, food group diversity, and food allergen diversity. Gut microbiome profiles and expression of cytokines were evaluated by bacterial 16S rRNA sequencing and real-time reverse transcriptase-polymerase chain reaction. High DD scores at 3 and 4 months were associated with a lower risk of developing HEA in the high-risk group, but not in the control group. In the high-risk group, high DD scores at 3, 4, and 5 months of age were associated with an increase in Chao1 index at 6 months. We found that the gene expression of IL-4, IL-5, IL-6, and IL-8 were higher among infants who had lower DD scores compared to those who had higher DD scores in high-risk infants. Additionally, high-risk infants with a higher FAD score at 5 months of age showed a reduced gene expression of IL-13. Increasing DD within 6 months of life may increase gut microbial diversity, and thus reduce the development of HEA in infants with a family history of allergic diseases.