• Title/Summary/Keyword: 클론성

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Measurement of the Affinity Constant of Monoclonal Antibody to Human Apolipoprotein A-I by ELISA (효소면역 분석법에 의한 아포지단백질 A-I 단일클론항체의 친화상수의 측정)

  • Mic Hung Yoon;Hyun Hee Lee
    • Biomedical Science Letters
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    • v.1 no.1
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    • pp.1-8
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    • 1995
  • The present study was undertaken to determine the dissociation constant (Kd)of monoclonal antibody to human apolipoprotein A-I (apo A-I) using enzyme-linked immunosorbent assay (ELISA). First the monoclonal antibody was incubated in solution with the antigen until the equilibrium was reached; then the free antibody which remains unsaturated at equilibrium was captured by binding to antigen on the microtiter plate and be measured by a classical indirect ELISA. The value of Kd determined from Scatchard plot was 0.625$\times$10^{-9}$ for purified antibody and 0.720$\times$10$^{-9}$ for unpurified antibody. This method was valuable for the measurement of true dissociation constant and found to be simple, reproducible, and accurate.

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Construction of the cDNA Library from Bombyx mori Larvae and Analysis of the Partial cDNA Sequences (누에 유충의 cDNA 유전자 은행 제작 및 cDNA 클론의 부분염기서울 분석)

  • 김상현;윤은영
    • Journal of Sericultural and Entomological Science
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    • v.38 no.1
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    • pp.13-18
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    • 1996
  • To secure the genetic resources of silkworm, Bomyx mori, the cDNA library was constructed with mRNA isolated from fifth instar larvae. Titer of the cDNA library was about 1.3 X 106 plaques in total. We presumed that the titer covered all transcripts existed in Bombyx mori. Meanwhile, it is knowen that partial cDNA sequences, Expressed Sequence Tags(ESTs), have a good value for the discovery of novel genes and the elucidation of their structures. For this purpose, partial cDNA sequencing was carried out from randomly selected cDNA clones in the library. Partial cDNA sequences of 37 clones were determined and an average of 212 nucleotides of sequence can be read from the clone. The ESTs were searched in GenBAnk database and fifteen ESTs showed significant similarities to enlisted sequences. They included the genes of storage protein, heat shock protein, actin, catalase and so forth. We presumed that the 22 unmatched ESTs were novel genes.

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Diversity Analysis for Archaeal amoA Gene in Marine Sediment of Svalbard, Arctic Circle (북극 Svalbard 지역 해양 퇴적물의 고세균 amoA 유전자의 다양성 분석)

  • Park, Soo-Je;Rhee, Sung-Keun
    • Korean Journal of Microbiology
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    • v.50 no.2
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    • pp.164-168
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    • 2014
  • The ecosystem of the Arctic region has been increasingly affected by global warming. Archaeal ammonia monooxygenase alpha subunit coding gene (amoA) which is a key enzyme for nitrification was used to investigate the effect of runoff water of ice melt on microbial community of nitrogen cycle. The archaeal amoA genes at coastal area of Svalbard, Arctic region were PCR-amplified and sequenced after clone library construction. Analysis of archaeal amoA gene clone libraries suggested that the station 188 which is in the vicinity to the area of runoff water harbor lower ammonia-oxidizing archaeal diversity than the station 176 and 184. The average amino acid sequence identity within all archaeal amoA gene clones was 94% (with 91% nucleotide sequence identity). While all the clones of the station 188 were affiliated with Nitrosoarchaeaum clade containing strains isolated from low-salinity and terrestrial environments, about 45% of total clones of the station 176 and 184 were related to marine Nitosopumilus clade. Interestingly, other typical archaeal amoA gene clones of thaumarchaeal I.1b clade frequently retrieved from terrestrial environments was identified at station 188. Microbial community of nitrogen cycle in marine sediment might be affected by input of sediments caused by runoff glacier melt waters.

GUS Gene expression and plant regeneration via somatic embryogenesis in cucumber (Cucumis sativus L.) (오이에서 체세포배 발생을 통한 GUS유전자의 발현 및 식물체 재생)

  • Kim, Hyun-A;Lee, Boo-Youn;Jeon, Jin-Jung;Choi, Dong-Woog;Choi, Pil-Son;Utomo, Setyo Dwi;Lee, Jae-Hyoek;Kang, Tong-Ho;Lee, Young-Jin
    • Journal of Plant Biotechnology
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    • v.35 no.4
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    • pp.275-280
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    • 2008
  • One of the limitation for Agrobacterium-mediated transformation via organogenesis from cotyledon explants routinely in cucumber is the production of chimeric plants. To overcome the limitation, Agrobacterium-mediated transformation system via somatic embryogenesis from hypocotyl explants of cucumber (c.v., Eunsung) on the selection medium with paromomycin as antibiotics was developed. The hypocotyl explants were inoculated with Agrobacterium tumefaciens strain EHA101 carrying binary vector pPTN290; then were subsequently cultured on the following media: co-cultivation medium for 2 days, selection medium for $5{\times}14$ days, and regeneration medium. The T-DNA of the vector (pPTN290) carried two cassettes, Ubi promoter-gus gene as reporter and 35S promoter-nptll gene conferring resistance to paromomycin as selectable agent. The confirmation of stable transformation and the efficiency of transformation was based on the resistance to paromomycin indicated by the growth of putative transgenic calli on selection medium amended with 100mg/L paromomycin, and GUS gene expression. Forty eight clones (5.2%) with GUS gene expressed of 56 callus clones with resistance to paromomycin were independently obtained from 928 explants inoculated. Of 48 clones, transgenic plants were only regenerated from 5 clones (0.5%) at low frequency. The histochemical GUS assay in the transgenic seeds ($T_1$) also revealed that the gus gene was successfully integrated and segregated into each genome of transgenic cucumber.

Comparison of community structure of sulfate reducing bacteria in rice paddy and dry farming soils (논과 밭 토양의 황산염 환원세균 군집 구조 비교)

  • Lee, Jung Bae;Park, Kyeong Ryang
    • Korean Journal of Microbiology
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    • v.51 no.1
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    • pp.21-30
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    • 2015
  • The goal of this study was to identify relationships between the composition of sulfate reducing bacterial assemblages and terminal restriction fragment length polymorphism (T-RFLP) patterns in rice paddy and dry farming soils. Samples of organic farming soils, conventional farming soils, and dry field farming soils were collected in August and November. Analyses of the soil chemical composition revealed similar total nitrogen, total carbon and total inorganic phosphorus levels; however, the moisture content and total carbon were higher than in the other soils in both August and November, respectively. Sulfate reducing bacteria utilizing lactic acid were more widely distributed than those that used acetic acid, and the number of sulfate reducing bacteria in organic farming soil was most abundant. Phylogenetic analysis based on 181 clones revealed that most showed low similarity with cultured sulfate reducing bacteria, but more than 90% similarity with an uncultured sulfate reducing bacteria isolated from the environment. T-RFLP analysis revealed that fragments of 91, 357, 395, and 474 bp were most common, and the community structure of sulfate reducing bacteria changed seasonally.

Molecular Cloning and Identification of Novel Genes, Gomsin, Characteristically Expressed in Snailfish, Liparis tanakae (꼼치에서 특징적으로 발현되는 새로운 유전자 곰신의 분리 및 동정)

  • 송인선;이석근;손진기
    • Development and Reproduction
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    • v.6 no.1
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    • pp.7-16
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    • 2002
  • In order to obtain the specific genes of snailfish a subtracted cDNA library was constructed, and analysed by sequencing and GenBank search. Among them C90-171 clone was turned out to be genes showing low homology and nonredundant genes. This novel clone was named Gomsin(C90-171). Gomsin was shown to be intensely expressed in the epithelial cells, some mesenchymal cells, and sheaths of muscle bundles in the result of immunohistochemistry. In the cross reaction assay of Gomsin antibody against various human tissues, the Gomsin was strongly expressed in the ductal and acinar cells of salivary glands, which was similar to the expression patterns of proline-rich proteins(PRPs) of human. The antibody raised against the Gomsin was clearly cross-reacted with human salivary PRPs and also recombinant proteins of human PRPs in the Western blot and immunoprecipitation analysis. Contrast to the salivary PRPs, the Gomsin was not easily degraded in the mixed saliva, but rapidly attacked on the cultured keratocytes in vitro. The simulated protein structure of Gomsin was similar to the whorled pattern of PRPs, even though the amino acid sequence of Gomsin was quite different from those of PRPs. These data suggest that the Gomsin is a characteristic matrix protein in the skin and body of snailfish, which is also utilized for the tissue protection in the similar way to the PRPs of human muco-secretory organs.

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A numerical fluid dynamic study of a high temperature operating cyclone (고온 작동 싸이클론 유체역학적 거동 전산 연구)

  • Shin, Mi-Soo;Kim, Hey-Suk;Jang, Dong-Soon
    • Journal of Korean Society of Environmental Engineers
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    • v.31 no.11
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    • pp.1033-1040
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    • 2009
  • One thing to note in cyclone operation and design is to minimize the pressure drop with the enhancement of the efficiency of dust collection. This can be facilitated by the detailed resolution of complex fluid flow occurring inside a cyclone. To this end, the main objective of this study was to obtain the detailed fluid dynamics by the development of a reliable computation method and thereby to figure out the physics of dust collection mechanism for more extreme environment caused by high temperature and pressure condition. First of all, the computer program developed was evaluated against experimental result. That is, the numerical calculation predicts well the data of experimental pressure drop as a function of flow rate for the elevated pressure and temperature condition employed in this study. The increase of pressure and temperature generally affects significantly the collection efficiency of fine particle but the effect of pressure and temperature appears contrary each other. Therefore, the decrease of collection efficiency caused by the high operating temperature mainly due to the decrease of gaseous density can be remedied by increase of operating pressure. After the evaluation of the program, a series of parametric investigations are performed in terms of major cyclone design or operating parameters such as tangential velocity and vortex finder diameter for dusts of a certain range of particle diameters, etc. As expected, tangential velocity plays the most important effect on the collection efficiency. And the efficiency was not affected significantly by the change of the length of vortex finder but the diameter of vortex finder plays an important role for the enhancement of collection efficiency.

Clonal Variation of Flowering in Pinus thunbergii Seed Orchard (해송 채종원(採種園)에서 개화특성(開花特性)의 클론 변이(變異))

  • Han, Sang-Urk;Choi, Wan-Yong;Chang, Kyong-Hwan;Kim, Tae-Su;Song, Jeong-Ho
    • Journal of Korean Society of Forest Science
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    • v.90 no.6
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    • pp.717-724
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    • 2001
  • This study was conducted in an attempt to quantify some traits that may be involved in the reproductive process of Pinus thunbergii. During the past 6 years (1995-2000), we surveyed flowering patterns of 60 P. thunbergii clones in a seed orchard which was established in Anmyon-do, 1979. From this survey, we estimated clonal contributions of male and female flowers and sexual asymmetry. Among 60 clones, 18 clones (30%) accounted for 0.37 (1999)~0.46 (1995) of clonal contribution in female flowers and 0.44 (1999)~0.57 (1995) of clonal contribution in male flowers. As compared with the previous reports in other pine species, more clones made contributions to reproductive process in P. thunbergii seed orchard. The relative effective population numbers for females (v♀) varied from 0.59 (1995) to 0.91 (1999) and those for males ( v♂) were between 0.56 (1995) and 0.83 (1998) at gamete level. This showed that the female gametes effectively contribute to the reproductive process more than did the male gametes. The relative effective population numbers at clonal level ($v_b$) were in the range of 0.72 (1995) and 0.93 (1999). More than 73% of the total clones showed values of 0.4~0.6 ($0.5{\pm}0.1$) in maleness index. The values averaged over all the clones were temporally variable with the range of 73% in 1996 and 100% in 2000. The degree of sexual asymmetry ($A_s$) ranged from 0.09 to 0.26. These values were relatively low when compared with those of other trees, suggesting that P. thunbergii seed orchard remains a high level of homogeneity in the number of male and female. All of the various types of effective population numbers were positively correlated with each other while they were negatively correlated with the degree of sexual asymmetry.

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A Code Clustering Technique for Unifying Method Full Path of Reusable Cloned Code Sets of a Product Family (제품군의 재사용 가능한 클론 코드의 메소드 경로 통일을 위한 코드 클러스터링 방법)

  • Kim, Taeyoung;Lee, Jihyun;Kim, Eunmi
    • KIPS Transactions on Software and Data Engineering
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    • v.12 no.1
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    • pp.1-18
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    • 2023
  • Similar software is often developed with the Clone-And-Own (CAO) approach that copies and modifies existing artifacts. The CAO approach is considered as a bad practice because it makes maintenance difficult as the number of cloned products increases. Software product line engineering is a methodology that can solve the issue of the CAO approach by developing a product family through systematic reuse. Migrating product families that have been developed with the CAO approach to the product line engineering begins with finding, integrating, and building them as reusable assets. However, cloning occurs at various levels from directories to code lines, and their structures can be changed. This makes it difficult to build product line code base simply by finding clones. Successful migration thus requires unifying the source code's file path, class name, and method signature. This paper proposes a clustering method that identifies a set of similar codes scattered across product variants and some of their method full paths are different, so path unification is necessary. In order to show the effectiveness of the proposed method, we conducted an experiment using the Apo Games product line, which has evolved with the CAO approach. As a result, the average precision of clustering performed without preprocessing was 0.91 and the number of identified common clusters was 0, whereas our method showed 0.98 and 15 respectively.

석탄가스화 복합발전에서의 고온.고압 입자제어 기술

  • Jeong, Chang-Ho;Baek, Min-Su
    • Journal of the KSME
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    • v.52 no.5
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    • pp.30-34
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    • 2012
  • 고효율 청정 발전기술인 석탄가스화 복합발전(IGCC)에서 고온 고압의 연소성 합성가스에 함유된 비회(fly ash) 입자를 제어하는 집진 공정으로 사이클론, 필터 및 습식 스크러버 등이 사용된다. 이 글에서는 분류층 건식가스화공정이 적용된 IGCC 플랜트의 입자제어를 위한 집진 기술에 대하여 소개하고자 한다.

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